Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN27425


BLASTX 7.6.2

Query= UN27425 /QuerySize=1156
        (1155 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297800692|ref|XP_002868230.1| hypothetical protein ARALYDRAFT...    167   5e-039
gi|297795653|ref|XP_002865711.1| hypothetical protein ARALYDRAFT...    118   2e-024
gi|297831792|ref|XP_002883778.1| predicted protein [Arabidopsis ...    100   7e-019
gi|12322502|gb|AAG51256.1|AC025782_1 hypothetical protein [Arabi...     97   5e-018

>gi|297800692|ref|XP_002868230.1| hypothetical protein ARALYDRAFT_915320
        [Arabidopsis lyrata subsp. lyrata]

          Length = 269

 Score =  167 bits (421), Expect = 5e-039
 Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 6/142 (4%)
 Frame = +1

Query:  76 MESSHLSGKETDSAGEDESSLQVSGETSLLSQKSDEFLAEEKDVTLNDDDAFSDEDASVS 255
           MES HLSG+ET  A +D SSLQVSGE   LSQ SD+FLA+EKD +L      SDED   S
Sbjct:   1 MESRHLSGEETVPASQDGSSLQVSGEPFFLSQNSDDFLAKEKDASL------SDEDTLFS 54

Query: 256 DDDEEKDICNNEDYLQTEDVDSLEASNENQKKSELCIGMEFSSDESAYKAYRKYGGNHGF 435
           D DEE+ + NNED +QTEDVD +EA+NEN KK EL +GMEFSSDESAYKAYRKYG NHGF
Sbjct:  55 DFDEEEKLGNNEDSVQTEDVDVVEANNENDKKYELYLGMEFSSDESAYKAYRKYGANHGF 114

Query: 436 DVRRQRTSRKNQKLVRMV*ARQ 501
           DVR+QR   K  K V  + +++
Sbjct: 115 DVRKQRGKDKKLKRVAYICSKE 136

>gi|297795653|ref|XP_002865711.1| hypothetical protein ARALYDRAFT_917880
        [Arabidopsis lyrata subsp. lyrata]

          Length = 181

 Score =  118 bits (294), Expect = 2e-024
 Identities = 52/89 (58%), Positives = 76/89 (85%)
 Frame = +1

Query: 223 DAFSDEDASVSDDDEEKDICNNEDYLQTEDVDSLEASNENQKKSELCIGMEFSSDESAYK 402
           ++ S+++ASVS+ +EE DI N +DY+QTE+V +LE +  N+KK ELCIGMEFSSDE+AY 
Sbjct:  33 NSISEDEASVSEFEEEDDIANKDDYVQTEEVVALEENKVNEKKDELCIGMEFSSDEAAYI 92

Query: 403 AYRKYGGNHGFDVRRQRTSRKNQKLVRMV 489
           AY++YGGNHGF+VR+QR ++K +K+VR++
Sbjct:  93 AYKQYGGNHGFNVRKQRRTKKQEKVVRLL 121

>gi|297831792|ref|XP_002883778.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 91

 Score =  100 bits (247), Expect = 7e-019
 Identities = 48/90 (53%), Positives = 67/90 (74%), Gaps = 6/90 (6%)
 Frame = +1

Query: 175 SDEFLAEEKDVTLNDDDAFSDEDASVSDDDEEKDICNNEDYLQTEDVDSLEASNENQKKS 354
           S++FL EE      +DD+ S+++ASV++ +EE +I NNED LQTE+  +LEA+N+N KK 
Sbjct:   7 SEDFLVEE------EDDSISEDEASVNEFEEEDEIANNEDDLQTEEAAALEANNDNHKKD 60

Query: 355 ELCIGMEFSSDESAYKAYRKYGGNHGFDVR 444
           E+ +GMEFSSDE A+  Y+KYGGNHG   R
Sbjct:  61 EIYVGMEFSSDEIAHITYKKYGGNHGVHER 90

>gi|12322502|gb|AAG51256.1|AC025782_1 hypothetical protein [Arabidopsis
        thaliana]

          Length = 212

 Score =  97 bits (240), Expect = 5e-018
 Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 8/122 (6%)
 Frame = +1

Query: 175 SDEFLAEEKDVTLNDDDAFSDEDASVSDDDEEKDICNNEDYLQTEDVDSLEASNENQKKS 354
           S+E L E+K       D+  + +AS ++ +EE +I NNED + T++  +LEA+N+N+KK 
Sbjct:  13 SEELLVEKK------YDSIRENEASANEFEEEDEIANNEDDVVTKEAAALEANNDNEKKD 66

Query: 355 ELCIGMEFSSDESAYKAYRKYGGNHGFDVRRQRTSRKNQKLVRMV*ARQFLDHSCQD*NT 534
           ++ IGMEFSSD+ AY  Y+KYGGNHGF+V +QR  +K +  + +  ++  L+ + Q+  T
Sbjct:  67 DIYIGMEFSSDQIAYITYKKYGGNHGFNVGKQRKMKKREGDLELFASK--LEETSQNQKT 124

Query: 535 FS 540
           +S
Sbjct: 125 YS 126

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,246,566,084,941
Number of Sequences: 15229318
Number of Extensions: 3246566084941
Number of Successful Extensions: 788647151
Number of sequences better than 0.0: 0