BLASTX 7.6.2
Query= UN27436 /QuerySize=1407
(1406 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 600 8e-172
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 85 9e-017
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 85 9e-017
TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular... 72 1e-012
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 600 bits (1546), Expect = 8e-172
Identities = 329/442 (74%), Positives = 361/442 (81%), Gaps = 35/442 (7%)
Frame = +2
Query: 2 AEFVGEFWNVLPEALRDVIQNGDDSEKKSALRLVNIWEERKVFGSSGQILKEEVLRKLPE 181
+EFVGEFW VLP+ALRD+I+NGDD +KSA RLVNIWEERKVFGS GQILKEE+L + PE
Sbjct: 76 SEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGSRGQILKEELLGRQPE 135
Query: 182 NGTRNVALVPLKL----KQV--TPLERVVSAVEALHGVQIDEHDIVGKCTNVVGYLEKAA 343
NGTRN LVPLKL +QV + LE+VVSAVE LHGVQIDE +VGK TN GYLEKA
Sbjct: 136 NGTRNGNLVPLKLSVPQRQVNGSTLEKVVSAVEVLHGVQIDEDALVGKSTNAAGYLEKAT 195
Query: 344 QEVDRDLSSGHTPGPAVVKEVQGQHTILRDCIVQLVAMETSRTSLISHLREALQEQEVKL 523
QEV+RDLSSGH PGPAVVKE+QGQH ILRDCI QL AMETSRTSLISHLREALQEQE+KL
Sbjct: 196 QEVERDLSSGHAPGPAVVKELQGQHVILRDCIEQLGAMETSRTSLISHLREALQEQELKL 255
Query: 524 EQVRNHLQLARFQSDRTGDLCKQLINHGSSSHPPAT-EEESKEVVKVSFTA--------- 673
EQVRNHLQ+ARFQSDRTGDLC+QL++HG SS PPAT EEESKEV+KVS TA
Sbjct: 256 EQVRNHLQIARFQSDRTGDLCRQLLDHGGSSQPPATEEEESKEVIKVSSTAAAPQSFTHS 315
Query: 674 ----SAPVMFASNPPTQSVVVDPRKTEAAAMVAKLTASTSSAEMLSYVLSSFASEGIIG- 838
SAPVMFASN PTQS + DPRKT AAA+VAKLTASTSSAEMLSYVLSS ASEGIIG
Sbjct: 316 DVEQSAPVMFASN-PTQS-LEDPRKTAAAAVVAKLTASTSSAEMLSYVLSSLASEGIIGN 373
Query: 839 NNPPTVTETPPSDAYPPEKRPKLQNLDQSYL---QQNTSSATTSPP----PPPPAFQLQP 997
NNPP VTET S +PPEKRPKLQN DQSYL QNT++ ++S P PPPP FQLQP
Sbjct: 374 NNPPAVTETLSSVDFPPEKRPKLQNHDQSYLSPHHQNTATTSSSTPPQPLPPPPPFQLQP 433
Query: 998 QFLQPLQPPGPVNSTPFSYSI----ATTQQQQQQQGPWIPGLTSLPTTSAPSDNPYQKFQ 1165
QFLQPLQPPGPVN TPF+Y+I ATTQQQQQ+QGPW+PGLT L TTSAPS+N YQKFQ
Sbjct: 434 QFLQPLQPPGPVNHTPFNYTIATSTATTQQQQQEQGPWVPGLTQLSTTSAPSENSYQKFQ 493
Query: 1166 GQDGFYGTTNSPSSMTPVTRQ* 1231
GQDGFYG NS +TPVTRQ*
Sbjct: 494 GQDGFYG-INSSVPITPVTRQ* 514
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 85 bits (209), Expect = 9e-017
Identities = 52/183 (28%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Frame = +2
Query: 239 ERVVSAVEALHGVQIDEHDIVGKCTNVVGYLEKAAQEVDRDLSSGHTP-GPAVVKEVQGQ 415
E++VSA + +E + KC + V + K ++V+ S+ P ++ KE++ +
Sbjct: 169 EKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEE 228
Query: 416 HTILRDCIVQLVAMETSRTSLISHLREALQEQEVKLEQVRNHLQLARFQSDRTGDLCKQL 595
ILR + +L ++E SRTSL++HLREAL+EQE +LE +++ +Q+A+ Q++ ++ K+L
Sbjct: 229 ENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRL 288
Query: 596 INHGSSSHPPATEEESKEVVKVSFTASAPVMFASNPPTQSVVVDPRKTEAAAMVAKLTAS 775
N ++ T +S ++ S A A ++ +S S+++ + AA + +
Sbjct: 289 NNETPVNNNNGTSGQSAKITPASIAAMAEMLTSST--NSSMIMHSVLSSFAAEATQTSGL 346
Query: 776 TSS 784
T S
Sbjct: 347 TKS 349
Score = 67 bits (163), Expect = 2e-011
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 5 EFVGEFWNVLPEALRDVIQNGDDSEKKSALRLVNIWEERKVFGSSGQILKEEVL 166
EFV EFW VLP AL+D++ GDD K RLVNIWEER+VFGS + LK+ +L
Sbjct: 77 EFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGSRSKSLKDVML 130
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 85 bits (209), Expect = 9e-017
Identities = 52/183 (28%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Frame = +2
Query: 239 ERVVSAVEALHGVQIDEHDIVGKCTNVVGYLEKAAQEVDRDLSSGHTP-GPAVVKEVQGQ 415
E++VSA + +E + KC + V + K ++V+ S+ P ++ KE++ +
Sbjct: 41 EKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEE 100
Query: 416 HTILRDCIVQLVAMETSRTSLISHLREALQEQEVKLEQVRNHLQLARFQSDRTGDLCKQL 595
ILR + +L ++E SRTSL++HLREAL+EQE +LE +++ +Q+A+ Q++ ++ K+L
Sbjct: 101 ENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRL 160
Query: 596 INHGSSSHPPATEEESKEVVKVSFTASAPVMFASNPPTQSVVVDPRKTEAAAMVAKLTAS 775
N ++ T +S ++ S A A ++ +S S+++ + AA + +
Sbjct: 161 NNETPVNNNNGTSGQSAKITPASIAAMAEMLTSST--NSSMIMHSVLSSFAAEATQTSGL 218
Query: 776 TSS 784
T S
Sbjct: 219 TKS 221
>TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA
protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G65180.1); Has 4531 Blast hits to 4161 proteins in 412
species: Archae - 14; Bacteria - 404; Metazoa - 1999; Fungi - 666;
Plants - 262; Viruses - 36; Other Eukaryotes - 1150 (source: NCBI
BLink). | chr5:3145994-3148049 REVERSE
Length = 470
Score = 72 bits (174), Expect = 1e-012
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +2
Query: 5 EFVGEFWNVLPEALRDVIQNGDDSEKKSALRLVNIWEERKVFGSSGQILKEEVL 166
EFV EFWNVLP+AL+D++ GDD+ K + R++ IWEER+VFGS + LK+ +L
Sbjct: 77 EFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGSRSKSLKDVML 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,365,656,735
Number of Sequences: 33410
Number of Extensions: 14365656735
Number of Successful Extensions: 466371375
Number of sequences better than 0.0: 0
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