BLASTX 7.6.2
Query= UN27503 /QuerySize=1343
(1342 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 ... 209 4e-054
TAIR9_protein||AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INH... 179 5e-045
TAIR9_protein||AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALI... 157 2e-038
TAIR9_protein||AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALI... 155 6e-038
TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box p... 124 2e-028
TAIR9_protein||AT4G24390.2 | Symbols: | F-box family protein (F... 121 1e-027
TAIR9_protein||AT4G24390.1 | Symbols: | F-box family protein (F... 121 1e-027
TAIR9_protein||AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE IN... 104 1e-022
>TAIR9_protein||AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE
PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase
| chr4:1405108-1407057 REVERSE
Length = 586
Score = 209 bits (531), Expect = 4e-054
Identities = 99/110 (90%), Positives = 103/110 (93%)
Frame = +3
Query: 3 RVFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPS 182
RVFV NCYAV+PAAV RRFP MRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMA KS S
Sbjct: 43 RVFVGNCYAVSPAAVTRRFPEMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSS 102
Query: 183 LEELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
LEE+R+KRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDG+AAIA CR
Sbjct: 103 LEEIRMKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGIAAIAATCR 152
>TAIR9_protein||AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE
1); auxin binding / protein binding / ubiquitin-protein ligase |
chr3:23273479-23276181 REVERSE
Length = 595
Score = 179 bits (452), Expect = 5e-045
Identities = 83/110 (75%), Positives = 95/110 (86%)
Frame = +3
Query: 3 RVFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPS 182
+VF+ NCYAV+PA V RRFP +RS+ LKGKPHFAD+NLVPDGWGGY +PWIEAM+
Sbjct: 47 KVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106
Query: 183 LEELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
LEE+RLKRMVVTD+CLE IA SFK+FKVLVL+SCEGFSTDGLAAIA CR
Sbjct: 107 LEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCR 156
>TAIR9_protein||AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2);
auxin binding / ubiquitin-protein ligase | chr3:9868342-9870464
FORWARD
Length = 576
Score = 157 bits (395), Expect = 2e-038
Identities = 73/110 (66%), Positives = 87/110 (79%)
Frame = +3
Query: 3 RVFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPS 182
+VF+ NCYA+ P + RRFP ++SLTLKGKPHFAD+NLVP WGG+ PWIEA+A
Sbjct: 42 KVFIGNCYAINPERLLRRFPCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVG 101
Query: 183 LEELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
LEELRLKRMVVTDE LE ++ SF +FK LVL SCEGF+TDGLA+IA CR
Sbjct: 102 LEELRLKRMVVTDESLELLSRSFVNFKSLVLVSCEGFTTDGLASIAANCR 151
>TAIR9_protein||AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3);
auxin binding / ubiquitin-protein ligase | chr1:4368879-4370780
REVERSE
Length = 578
Score = 155 bits (391), Expect = 6e-038
Identities = 72/109 (66%), Positives = 86/109 (78%)
Frame = +3
Query: 6 VFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPSL 185
VF+ NCYA+ P + RRFP ++SLTLKGKPHFAD+NLVP WGG+ PWIEA+A L
Sbjct: 43 VFIGNCYAINPERLIRRFPCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGL 102
Query: 186 EELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
EELRLKRMVVTDE L+ ++ SF +FK LVL SCEGF+TDGLA+IA CR
Sbjct: 103 EELRLKRMVVTDESLDLLSRSFANFKSLVLVSCEGFTTDGLASIAANCR 151
>TAIR9_protein||AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5);
ubiquitin-protein ligase | chr5:20334420-20336531 REVERSE
Length = 620
Score = 124 bits (309), Expect = 2e-028
Identities = 57/109 (52%), Positives = 75/109 (68%)
Frame = +3
Query: 6 VFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPSL 185
VF+ NCYA++PA + +RF +RSL LKGKP FAD+NL+P WG PW+ MA+ P L
Sbjct: 93 VFIGNCYALSPARLTQRFKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCL 152
Query: 186 EELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
E++ LKRM VTD+ L +A SF FK L+L CEGF T G++ +A CR
Sbjct: 153 EKVDLKRMFVTDDDLALLADSFPGFKELILVCCEGFGTSGISIVANKCR 201
>TAIR9_protein||AT4G24390.2 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 624
Score = 121 bits (303), Expect = 1e-027
Identities = 57/109 (52%), Positives = 73/109 (66%)
Frame = +3
Query: 6 VFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPSL 185
VF+ NCY+++PA + RF +RSL LKGKP FAD+NL+P WG PW+ A A+ P L
Sbjct: 93 VFIGNCYSLSPARLIHRFKRVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWL 152
Query: 186 EELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
E++ LKRM VTD+ L +A SF FK L L CEGF T G+A +A CR
Sbjct: 153 EKVHLKRMFVTDDDLALLAESFPGFKELTLVCCEGFGTSGIAIVANKCR 201
>TAIR9_protein||AT4G24390.1 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 624
Score = 121 bits (303), Expect = 1e-027
Identities = 57/109 (52%), Positives = 73/109 (66%)
Frame = +3
Query: 6 VFVRNCYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPSL 185
VF+ NCY+++PA + RF +RSL LKGKP FAD+NL+P WG PW+ A A+ P L
Sbjct: 93 VFIGNCYSLSPARLIHRFKRVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWL 152
Query: 186 EELRLKRMVVTDECLEKIAASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
E++ LKRM VTD+ L +A SF FK L L CEGF T G+A +A CR
Sbjct: 153 EKVHLKRMFVTDDDLALLAESFPGFKELTLVCCEGFGTSGIAIVANKCR 201
>TAIR9_protein||AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1);
protein binding / ubiquitin-protein ligase | chr2:16672848-16675486
REVERSE
Length = 593
Score = 104 bits (259), Expect = 1e-022
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +3
Query: 21 CYAVTPAAVARRFPGMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAEKSPSLEELRL 200
CY TP ++RRFP +RSL LKGKP A +NL+P+ WGGY PW+ ++ L+ +
Sbjct: 60 CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHF 119
Query: 201 KRMVVTDECLEKIA-ASFKDFKVLVLTSCEGFSTDGLAAIAVACR 332
+RM+V+D L+++A A D + L L C GF+TDGL +I CR
Sbjct: 120 RRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCR 164
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,407,369,805
Number of Sequences: 33410
Number of Extensions: 14407369805
Number of Successful Extensions: 466427076
Number of sequences better than 0.0: 0
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