Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN27601


BLASTX 7.6.2

Query= UN27601 /QuerySize=1164
        (1163 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18397991|ref|NP_565385.1| MD-2-related lipid recognition doma...     59   1e-006
gi|21618166|gb|AAM67216.1| unknown [Arabidopsis thaliana]               59   1e-006

>gi|18397991|ref|NP_565385.1| MD-2-related lipid recognition domain-containing
        protein [Arabidopsis thaliana]

          Length = 160

 Score =  59 bits (142), Expect = 1e-006
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
 Frame = +1

Query:  31 MAICHAQALLLLFVSILFLPAALGTAIEFSNDPHHLYQGVVKVTKVEIIPYPIKFHDNPI 210
           MAI H Q LLLL VS+ F PA  G   + + D    Y   +KV+ VEI P P+K   N  
Sbjct:   1 MAISHTQLLLLLLVSLFFSPALCGPKFQ-TCDTGKEYP--LKVSSVEISPDPVKRSGNGE 57

Query: 211 FKITAVTSQNLTEPERILHVEFTSLGGIRNGVFNLRYYLCSKTKCPIEPGRPFEITLANV 390
             IT VT++ +++   +       L      V    Y LC  T CP+ PG P  +TL N+
Sbjct:  58 ITITGVTNKEISDGVTV----NLKLAVGMFPVSTKSYSLCDITACPVAPG-PIVLTLPNI 112

Query: 391 Y 393
           +
Sbjct: 113 F 113

>gi|21618166|gb|AAM67216.1| unknown [Arabidopsis thaliana]

          Length = 160

 Score =  59 bits (142), Expect = 1e-006
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
 Frame = +1

Query:  31 MAICHAQALLLLFVSILFLPAALGTAIEFSNDPHHLYQGVVKVTKVEIIPYPIKFHDNPI 210
           MAI H Q LLLL VS+ F PA  G   + + D    Y   +KV+ VEI P P+K   N  
Sbjct:   1 MAISHTQLLLLLLVSLFFSPALCGPKFQ-TCDTGKEYP--LKVSSVEISPDPVKRSGNGE 57

Query: 211 FKITAVTSQNLTEPERILHVEFTSLGGIRNGVFNLRYYLCSKTKCPIEPGRPFEITLANV 390
             IT VT++ +++   +       L      V    Y LC  T CP+ PG P  +TL N+
Sbjct:  58 ITITGVTNKEISDGVTV----NLKLAVGMFPVSTKSYSLCDITACPVAPG-PIVLTLPNI 112

Query: 391 Y 393
           +
Sbjct: 113 F 113

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,260,724,810,775
Number of Sequences: 15229318
Number of Extensions: 3260724810775
Number of Successful Extensions: 797147887
Number of sequences better than 0.0: 0