BLASTX 7.6.2
Query= UN27740 /QuerySize=1040
(1039 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (... 353 1e-097
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 73 2e-013
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 73 2e-013
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 73 2e-013
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 72 4e-013
TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABI... 69 3e-012
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 68 1e-011
TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular... 63 2e-010
TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular... 63 2e-010
TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-re... 63 3e-010
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 55 7e-008
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 55 9e-008
TAIR9_protein||AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular... 54 1e-007
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 53 2e-007
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 53 3e-007
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 52 6e-007
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 51 9e-007
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 51 1e-006
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 50 2e-006
>TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component response
regulator | chr5:24675540-24678176 FORWARD
Length = 619
Score = 353 bits (905), Expect = 1e-097
Identities = 195/255 (76%), Positives = 204/255 (80%), Gaps = 24/255 (9%)
Frame = +1
Query: 16 LHSSKSYQEVPNSLERSRTLPPPMELHGGRSCYQEGAMDDTRVAAKDS--SSQIDASRFA 189
L + SY P+SLERSRTLP ME HG YQEG M+ +VA S SSQ+D S F+
Sbjct: 385 LQNGASY---PHSLERSRTLPTSMESHGRN--YQEGNMNIPQVAMNRSKDSSQVDGSGFS 439
Query: 190 AQNAYPYYMHGVMNQVMMQSAGMMPQYGHQHPHCPPNHLNGMTGFPYYHHHPMNTSLQHS 369
A NAYPYYMHGVMNQVMMQSA MMPQYGHQ PHC PNH NGMTG+PYY HHPMNTSLQHS
Sbjct: 440 APNAYPYYMHGVMNQVMMQSAAMMPQYGHQIPHCQPNHPNGMTGYPYY-HHPMNTSLQHS 498
Query: 370 QMSQNGQVPLQNGQMPMVHHHHHHSWPQTQIGNHPSPNEVRVTKLDRREEALLKFRRKRN 549
QMS LQNGQM MV HHSW + GN PS NEVRV KLDRREEALLKFRRKRN
Sbjct: 499 QMS------LQNGQMSMV----HHSW--SPAGNPPS-NEVRVNKLDRREEALLKFRRKRN 545
Query: 550 QRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPEPDFADYDD-EEEEDEEE 726
QRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ PD ADYDD EEEE+EEE
Sbjct: 546 QRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ--PDSADYDDEEEEEEEEE 603
Query: 727 EENRDSSPQDDALGT 771
EENRDSSPQDDALGT
Sbjct: 604 EENRDSSPQDDALGT 618
Score = 190 bits (482), Expect = 1e-048
Identities = 104/130 (80%), Positives = 109/130 (83%), Gaps = 9/130 (6%)
Frame = +1
Query: 397 LQNGQMPMVHHHH---HHSWPQTQIGNHPSPNEVRVTKLDRREEALLKFRRKRNQRCFDK 567
LQ+ QM + + HHSW + GN PS NEVRV KLDRREEALLKFRRKRNQRCFDK
Sbjct: 495 LQHSQMSLQNGQMSMVHHSW--SPAGNPPS-NEVRVNKLDRREEALLKFRRKRNQRCFDK 551
Query: 568 KIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPEPDFADYDD-EEEEDEEEEENRDS 744
KIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ PD ADYDD EEEE+EEEEENRDS
Sbjct: 552 KIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ--PDSADYDDEEEEEEEEEEENRDS 609
Query: 745 SPQDDALGT* 774
SPQDDALGT*
Sbjct: 610 SPQDDALGT* 619
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 73 bits (178), Expect = 2e-013
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 645
+RE AL+KFR KR RCFDKK+RY +RK+LAE+RPRVKGQFVR +N
Sbjct: 299 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 344
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 73 bits (178), Expect = 2e-013
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 645
+RE AL+KFR KR RCFDKK+RY +RK+LAE+RPRVKGQFVR +N
Sbjct: 131 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 176
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 73 bits (178), Expect = 2e-013
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 645
+RE AL+KFR KR RCFDKK+RY +RK+LAE+RPRVKGQFVR +N
Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 461
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 72 bits (176), Expect = 4e-013
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = +1
Query: 475 SPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
S N K+ +RE AL KFR+KR +RCF KK+RY +RK+LAE+RPRV+GQFVRK
Sbjct: 657 SGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 711
>TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator | chr5:24198215-24200502 REVERSE
Length = 496
Score = 69 bits (168), Expect = 3e-012
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
+RE AL+KFR KR +RCF+KK+RY +RK+LAE+RP VKGQF+RK
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 68 bits (164), Expect = 1e-011
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKM 642
+RE AL KFR KR RC++KK+RY +RK+LAE+RPR+KGQFVR++
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants
- 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 411
Score = 63 bits (152), Expect = 2e-010
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +1
Query: 481 NEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 660
N+V ++R+E + ++ +KRN+R F+KKI+Y RK LA+ RPRV+G+F + D
Sbjct: 301 NKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKN------D 354
Query: 661 LNGQPEPD-FADYDDEEEEDE----EEEENRDSS 747
G+P F+ + D+E+ED+ +EE+ DSS
Sbjct: 355 EFGEPNRQAFSSHHDDEDEDDMGVKDEEQLVDSS 388
>TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7688 Blast hits to 4734 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 118; Plants
- 919; Viruses - 0; Other Eukaryotes - 6470 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 410
Score = 63 bits (152), Expect = 2e-010
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +1
Query: 481 NEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 660
N+V ++R+E + ++ +KRN+R F+KKI+Y RK LA+ RPRV+G+F + D
Sbjct: 300 NKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKN------D 353
Query: 661 LNGQPEPD-FADYDDEEEEDE----EEEENRDSS 747
G+P F+ + D+E+ED+ +EE+ DSS
Sbjct: 354 EFGEPNRQAFSSHHDDEDEDDMGVKDEEQLVDSS 387
>TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-related |
chr1:1221757-1224235 REVERSE
Length = 387
Score = 63 bits (151), Expect = 3e-010
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Frame = +1
Query: 472 PSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGV 651
PS N+V ++R+E + ++ +KRN+R F KKI+Y RK LA+ RPRV+G+F +
Sbjct: 275 PSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN---- 330
Query: 652 NVDLNGQPEPDFADYDDEEEEDE----EEEENRDSS 747
D G+P E+++D+ EEE+ DSS
Sbjct: 331 --DEFGEPNRQACSSHHEDDDDDVGVKEEEQLVDSS 364
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 55 bits (131), Expect = 7e-008
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = +1
Query: 337 HHPMNTSLQHSQMSQNGQVPLQNGQMPMVHHHHHHSWPQTQIGNHPSP--NEVRVTKLD- 507
H+ N S+ H+ + + + V H P+ + P P + VT+L
Sbjct: 244 HYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQPDPASQMITVTQLSP 303
Query: 508 -RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
RE +L++R KR R F+K IRY +RK AE RPRV G+F ++
Sbjct: 304 MDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 55 bits (130), Expect = 9e-008
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +1
Query: 511 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNV 657
RE ++L+++ KR R F KKIRY RK A++RPR+KG+FVR+ N N+
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNARNL 389
>TAIR9_protein||AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G63820.1); Has 952 Blast
hits to 949 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa -
12; Fungi - 2; Plants - 890; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink). | chr5:16562129-16563553 REVERSE
Length = 308
Score = 54 bits (128), Expect = 1e-007
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Frame = +1
Query: 505 DRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPEPD 684
+ R+E + K+R KRNQR F K I+Y RK LA+ RPR++G+F R V + P+
Sbjct: 213 EERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEI-------PN 265
Query: 685 FADYDDE 705
D D E
Sbjct: 266 IEDDDSE 272
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 53 bits (126), Expect = 2e-007
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +1
Query: 511 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
RE +LL+++ KR R F K+IRY RK AE+RPRVKG+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 53 bits (125), Expect = 3e-007
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +1
Query: 511 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 645
RE ++L+++ KR R F KKIRY RK A++RPR+KG+FVR+ N
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 427
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 52 bits (123), Expect = 6e-007
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +1
Query: 508 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
RRE ++L+++ KR R F KKIRY RK A++RPR KG+FV++
Sbjct: 150 RREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 51 bits (121), Expect = 9e-007
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 511 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
RE +L+++ KR R F KKIRY RK AE+RPR+KG+FV++
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 51 bits (120), Expect = 1e-006
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 505 DRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVR 636
+ R+E + K+R KR QR F K I+Y RK LA+ RPRV+G+F R
Sbjct: 190 EERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR 233
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 50 bits (119), Expect = 2e-006
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 472 PSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 639
P E RV RE + ++R KR R F+KKIRY RK A++RPR+KG+FVR+
Sbjct: 267 PGIEEKRVR--SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 320
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,450,418,344
Number of Sequences: 33410
Number of Extensions: 14450418344
Number of Successful Extensions: 466444168
Number of sequences better than 0.0: 0
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