BLASTX 7.6.2
Query= UN27819 /QuerySize=1191
(1190 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|A1A6J3|A1A6J3_ARATH Pseudouridylate synthase OS=Arabidopsis t... 565 5e-159
tr|Q0WPX6|Q0WPX6_ARATH Pseudouridylate synthase OS=Arabidopsis t... 562 4e-158
tr|Q9M904|Q9M904_ARATH Pseudouridylate synthase OS=Arabidopsis t... 526 2e-147
tr|B9S012|B9S012_RICCO Pseudouridylate synthase OS=Ricinus commu... 426 2e-117
tr|Q1ZY14|Q1ZY14_BETVU Pseudouridylate synthase OS=Beta vulgaris... 367 2e-099
tr|B9FNM5|B9FNM5_ORYSJ Pseudouridylate synthase OS=Oryza sativa ... 311 1e-082
tr|B7EV41|B7EV41_ORYSJ Pseudouridylate synthase OS=Oryza sativa ... 292 5e-077
tr|B8A3F7|B8A3F7_MAIZE Pseudouridylate synthase OS=Zea mays PE=2... 290 3e-076
tr|B9HMQ8|B9HMQ8_POPTR Pseudouridylate synthase (Fragment) OS=Po... 277 2e-072
tr|C5XVS8|C5XVS8_SORBI Pseudouridylate synthase OS=Sorghum bicol... 264 2e-068
tr|B4FLG8|B4FLG8_MAIZE Pseudouridylate synthase OS=Zea mays PE=2... 262 6e-068
tr|A9RTE3|A9RTE3_PHYPA Pseudouridylate synthase OS=Physcomitrell... 258 1e-066
tr|A5BHS7|A5BHS7_VITVI Pseudouridylate synthase OS=Vitis vinifer... 255 9e-066
tr|C1ECC9|C1ECC9_9CHLO Pseudouridylate synthase (Fragment) OS=Mi... 182 8e-044
tr|D1R655|D1R655_9CHLA Putative uncharacterized protein OS=Parac... 170 3e-040
tr|C2DZZ6|C2DZZ6_9LACO tRNA pseudouridine synthase A OS=Lactobac... 162 8e-038
tr|C7Y1L6|C7Y1L6_9LACO tRNA pseudouridine synthase A OS=Lactobac... 162 8e-038
tr|D4YT89|D4YT89_9LACO tRNA pseudouridine synthase A OS=Lactobac... 159 5e-037
tr|C2EQX8|C2EQX8_9LACO tRNA pseudouridine synthase A OS=Lactobac... 159 7e-037
>tr|A1A6J3|A1A6J3_ARATH Pseudouridylate synthase OS=Arabidopsis thaliana
GN=At3g06950 PE=2 SV=1
Length = 323
Score = 565 bits (1454), Expect = 5e-159
Identities = 281/323 (86%), Positives = 294/323 (91%), Gaps = 1/323 (0%)
Frame = +2
Query: 20 MSSATPALPTSLFTNGSLSSPQNISKTELNSFVKVSDPAIYKWRLVIAYDGTKFAGWQYQ 199
MS TPALP SLFTNG LSSPQNIS T LNS VKVSD YKWRLVIAYDGT+FAGWQYQ
Sbjct: 1 MSCVTPALPPSLFTNGYLSSPQNISMTNLNSSVKVSDSGAYKWRLVIAYDGTRFAGWQYQ 60
Query: 200 ESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSLDSIHA 379
ESPPTIQSMLEKAL QIT+L RK+L L+GAGRTDAGVHAWGQVAHFVTPFNYTSLDS HA
Sbjct: 61 ESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQVAHFVTPFNYTSLDSFHA 120
Query: 380 ALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNA 559
ALNGLLP+DIRVRE+ AAV EFHARFS SKVYRYQIY+DTFMDPFQRH AYH AYKLNA
Sbjct: 121 ALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYNDTFMDPFQRHWAYHCAYKLNA 180
Query: 560 SKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQ 739
SKMREAA FVGKHDFSAFANATREDG PDPLKTISRFDVI+MGSLLQLEVEGSGF+YRQ
Sbjct: 181 SKMREAANLFVGKHDFSAFANATREDGVPDPLKTISRFDVIQMGSLLQLEVEGSGFLYRQ 240
Query: 740 VRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYT-LPAPPHGLCLVSVKYKEDHLQL 916
VRNMVALL+Q+GKEALDSDIVPMILETKDRR LAKYT LPA PHGLCLVSVKYKEDHL+L
Sbjct: 241 VRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLPASPHGLCLVSVKYKEDHLKL 300
Query: 917 PPDSPLTSFGRHHTITKCKLPFY 985
P D P+TS GRHHTITKCKLPFY
Sbjct: 301 PLDCPVTSSGRHHTITKCKLPFY 323
>tr|Q0WPX6|Q0WPX6_ARATH Pseudouridylate synthase OS=Arabidopsis thaliana
GN=At3g06950 PE=2 SV=1
Length = 323
Score = 562 bits (1447), Expect = 4e-158
Identities = 280/323 (86%), Positives = 293/323 (90%), Gaps = 1/323 (0%)
Frame = +2
Query: 20 MSSATPALPTSLFTNGSLSSPQNISKTELNSFVKVSDPAIYKWRLVIAYDGTKFAGWQYQ 199
MS TPALP SLFTNG LSSPQNIS T LNS VKVS YKWRLVIAYDGT+FAGWQYQ
Sbjct: 1 MSCVTPALPPSLFTNGYLSSPQNISMTNLNSSVKVSGSGAYKWRLVIAYDGTRFAGWQYQ 60
Query: 200 ESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSLDSIHA 379
ESPPTIQSMLEKAL QIT+L RK+L L+GAGRTDAGVHAWGQVAHFVTPFNYTSLDS HA
Sbjct: 61 ESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQVAHFVTPFNYTSLDSFHA 120
Query: 380 ALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNA 559
ALNGLLP+DIRVRE+ AAV EFHARFS SKVYRYQIY+DTFMDPFQRH AYH AYKLNA
Sbjct: 121 ALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYNDTFMDPFQRHWAYHCAYKLNA 180
Query: 560 SKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQ 739
SKMREAA FVGKHDFSAFANATREDG PDPLKTISRFDVI+MGSLLQLEVEGSGF+YRQ
Sbjct: 181 SKMREAANLFVGKHDFSAFANATREDGVPDPLKTISRFDVIQMGSLLQLEVEGSGFLYRQ 240
Query: 740 VRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYT-LPAPPHGLCLVSVKYKEDHLQL 916
VRNMVALL+Q+GKEALDSDIVPMILETKDRR LAKYT LPA PHGLCLVSVKYKEDHL+L
Sbjct: 241 VRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLPASPHGLCLVSVKYKEDHLKL 300
Query: 917 PPDSPLTSFGRHHTITKCKLPFY 985
P D P+TS GRHHTITKCKLPFY
Sbjct: 301 PLDCPVTSSGRHHTITKCKLPFY 323
>tr|Q9M904|Q9M904_ARATH Pseudouridylate synthase OS=Arabidopsis thaliana
GN=F17A9.10 PE=3 SV=1
Length = 298
Score = 526 bits (1354), Expect = 2e-147
Identities = 260/297 (87%), Positives = 273/297 (91%), Gaps = 1/297 (0%)
Frame = +2
Query: 98 TELNSFVKVSDPAIYKWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLH 277
T LNS VKVSD YKWRLVIAYDGT+FAGWQYQESPPTIQSMLEKAL QIT+L RK+L
Sbjct: 2 TNLNSSVKVSDSGAYKWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQ 61
Query: 278 LVGAGRTDAGVHAWGQVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARF 457
L+GAGRTDAGVHAWGQVAHFVTPFNYTSLDS HAALNGLLP+DIRVRE+ AAV EFHARF
Sbjct: 62 LIGAGRTDAGVHAWGQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARF 121
Query: 458 SCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATRED 637
S SKVYRYQIY+DTFMDPFQRH AYH AYKLNASKMREAA FVGKHDFSAFANATRED
Sbjct: 122 SASSKVYRYQIYNDTFMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFSAFANATRED 181
Query: 638 GAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILE 817
G PDPLKTISRFDVI+MGSLLQLEVEGSGF+YRQVRNMVALL+Q+GKEALDSDIVPMILE
Sbjct: 182 GVPDPLKTISRFDVIQMGSLLQLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILE 241
Query: 818 TKDRRELAKYT-LPAPPHGLCLVSVKYKEDHLQLPPDSPLTSFGRHHTITKCKLPFY 985
TKDRR LAKYT LPA PHGLCLVSVKYKEDHL+LP D P+TS GRHHTITKCKLPFY
Sbjct: 242 TKDRRVLAKYTSLPASPHGLCLVSVKYKEDHLKLPLDCPVTSSGRHHTITKCKLPFY 298
>tr|B9S012|B9S012_RICCO Pseudouridylate synthase OS=Ricinus communis
GN=RCOM_1003810 PE=3 SV=1
Length = 344
Score = 426 bits (1095), Expect = 2e-117
Identities = 203/274 (74%), Positives = 236/274 (86%)
Frame = +2
Query: 140 YKWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAW 319
+KWRLVIAYDGT++AGWQ+Q+SPPTIQ LEKAL Q+TKL RK L LVGA RTD GVHA+
Sbjct: 71 FKWRLVIAYDGTRYAGWQFQQSPPTIQCYLEKALIQVTKLDRKDLLLVGASRTDTGVHAF 130
Query: 320 GQVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSD 499
GQVAHFVTPFNY SLD+IHAALNGLLP DIRVREI AV EFHARFS SK+Y Y+IY+D
Sbjct: 131 GQVAHFVTPFNYPSLDTIHAALNGLLPPDIRVREISPAVPEFHARFSTISKLYHYKIYND 190
Query: 500 TFMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDV 679
TFMDPF RH AYH+ YKLNA+ MR+AA++F+G HDFSAFANA+R+D P+P+KTI RFDV
Sbjct: 191 TFMDPFLRHYAYHSTYKLNAAAMRQAAKYFIGSHDFSAFANASRDDRVPNPVKTIFRFDV 250
Query: 680 IEMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPA 859
IEMG+LLQLEVEG+GF+YRQVRNMVALL+Q+GKEA+ +IVP IL +DRRELAKY LP
Sbjct: 251 IEMGALLQLEVEGTGFLYRQVRNMVALLLQIGKEAVPPEIVPKILAARDRRELAKYALPT 310
Query: 860 PPHGLCLVSVKYKEDHLQLPPDSPLTSFGRHHTI 961
PPHGLCLVS+KY E+HL+LP P TSFGR T+
Sbjct: 311 PPHGLCLVSIKYNEEHLRLPSGCPTTSFGRWFTV 344
>tr|Q1ZY14|Q1ZY14_BETVU Pseudouridylate synthase OS=Beta vulgaris PE=3 SV=1
Length = 278
Score = 367 bits (941), Expect = 2e-099
Identities = 175/248 (70%), Positives = 202/248 (81%)
Frame = +2
Query: 188 WQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSLD 367
WQYQ SPPT+Q +EKALT+IT L RK+L +VGAGRTD GVHAWGQVAHF TPFNY SLD
Sbjct: 26 WQYQASPPTVQCAIEKALTKITHLDRKELSVVGAGRTDTGVHAWGQVAHFFTPFNYDSLD 85
Query: 368 SIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAY 547
+HAA NGLLP DIRVRE+ A +FHARFS + K+YRY IY+ +FMDPF R+ YH+ Y
Sbjct: 86 EVHAAFNGLLPSDIRVREVSPASPQFHARFSAKGKIYRYSIYNSSFMDPFLRYHVYHSTY 145
Query: 548 KLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGF 727
KLNA+ M EAA++F GKHDF+AFANA R D DP+KTISRFDV E G LL+LEVEGSGF
Sbjct: 146 KLNAAVMAEAARYFTGKHDFTAFANAIRNDRVRDPIKTISRFDVTERGPLLELEVEGSGF 205
Query: 728 MYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKEDH 907
+YRQVRNMVALL+Q+G+EA+ DIVP ILETK+RRELAKYT PPHGL LVSVKY EDH
Sbjct: 206 LYRQVRNMVALLLQIGREAIPPDIVPEILETKNRRELAKYTKSTPPHGLSLVSVKYNEDH 265
Query: 908 LQLPPDSP 931
L+LP P
Sbjct: 266 LKLPSGCP 273
>tr|B9FNM5|B9FNM5_ORYSJ Pseudouridylate synthase OS=Oryza sativa subsp. japonica
GN=OsJ_17893 PE=3 SV=1
Length = 279
Score = 311 bits (796), Expect = 1e-082
Identities = 146/211 (69%), Positives = 172/211 (81%)
Frame = +2
Query: 119 KVSDPAIYKWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRT 298
+ ++ A YKWR+VIAYDGTKF GWQYQ SPPTIQ +E ALT+ITKL RK+L LVGAGRT
Sbjct: 56 ETTEGASYKWRMVIAYDGTKFKGWQYQPSPPTIQCSIENALTRITKLDRKELCLVGAGRT 115
Query: 299 DAGVHAWGQVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVY 478
D GVHAWGQVAHF TPF+Y LDS+H+A+NGLLP +IRVREI AA EFHAR S RSK+Y
Sbjct: 116 DTGVHAWGQVAHFTTPFSYHCLDSMHSAINGLLPHEIRVREISAAKPEFHARTSTRSKIY 175
Query: 479 RYQIYSDTFMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLK 658
Y+IY+ MDPF H AYH+AYKLN+ MREAA+HFVG HDF++FANA D P+K
Sbjct: 176 HYKIYNGPVMDPFHNHYAYHSAYKLNSQAMREAAKHFVGTHDFTSFANAVHNDRVRSPIK 235
Query: 659 TISRFDVIEMGSLLQLEVEGSGFMYRQVRNM 751
I RFDVIEMG++LQLE+EG+GF+YRQVRNM
Sbjct: 236 KIMRFDVIEMGAILQLEIEGTGFLYRQVRNM 266
>tr|B7EV41|B7EV41_ORYSJ Pseudouridylate synthase OS=Oryza sativa subsp. japonica
PE=2 SV=1
Length = 223
Score = 292 bits (747), Expect = 5e-077
Identities = 142/220 (64%), Positives = 171/220 (77%)
Frame = +2
Query: 326 VAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTF 505
VAHF TPF+Y LDS+H+A+NGLLP +IRVREI AA EFHAR S RSK+Y Y+IY+
Sbjct: 4 VAHFTTPFSYHCLDSMHSAINGLLPHEIRVREISAAKPEFHARTSTRSKIYHYKIYNGPV 63
Query: 506 MDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIE 685
MDPF H AYH+AYKLN+ MREAA+HFVG HDF++FANA D P+K I RFDVIE
Sbjct: 64 MDPFHNHYAYHSAYKLNSQAMREAAKHFVGTHDFTSFANAVHNDRVRSPIKKIMRFDVIE 123
Query: 686 MGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAPP 865
MG++LQLE+EG+GF+YRQVRNMVALL+QVG+EAL DIV I+ +DR+ELAK L APP
Sbjct: 124 MGAILQLEIEGTGFLYRQVRNMVALLLQVGREALPPDIVAKIIAARDRKELAKVALSAPP 183
Query: 866 HGLCLVSVKYKEDHLQLPPDSPLTSFGRHHTITKCKLPFY 985
HGL L+SV Y ++ LQ P +P SFGR H I+KCKL FY
Sbjct: 184 HGLYLMSVNYDKEMLQPPEGAPHISFGRTHQISKCKLLFY 223
>tr|B8A3F7|B8A3F7_MAIZE Pseudouridylate synthase OS=Zea mays PE=2 SV=1
Length = 271
Score = 290 bits (740), Expect = 3e-076
Identities = 143/221 (64%), Positives = 171/221 (77%)
Frame = +2
Query: 323 QVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDT 502
QVAHF TPF+Y+ L SIH+A+NGL P +IRVREI AA EFHAR S +SKVYRY+IY++
Sbjct: 51 QVAHFTTPFSYSCLSSIHSAMNGLPPPEIRVREISAARPEFHARSSTKSKVYRYKIYNEA 110
Query: 503 FMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVI 682
MDPF H AYH+AYKLN M+EAA +FVG HDF++FANA DG P K I+RFDV
Sbjct: 111 IMDPFHNHYAYHSAYKLNPHAMQEAANYFVGIHDFTSFANAAHNDGERRPTKKITRFDVT 170
Query: 683 EMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAP 862
EMG++LQLEVEG+GF+YRQVRNMVALL+QVGKEAL DIVP I+ +DR+ELAK L AP
Sbjct: 171 EMGAVLQLEVEGTGFLYRQVRNMVALLLQVGKEALPPDIVPAIIAARDRKELAKVALSAP 230
Query: 863 PHGLCLVSVKYKEDHLQLPPDSPLTSFGRHHTITKCKLPFY 985
PHGL L+SV Y E+ L+ P SP SFGR H ++KCKL Y
Sbjct: 231 PHGLYLMSVNYDEEILKPPEGSPPISFGRTHHLSKCKLTLY 271
>tr|B9HMQ8|B9HMQ8_POPTR Pseudouridylate synthase (Fragment) OS=Populus
trichocarpa GN=POPTRDRAFT_721191 PE=3 SV=1
Length = 232
Score = 277 bits (707), Expect = 2e-072
Identities = 139/221 (62%), Positives = 168/221 (76%), Gaps = 8/221 (3%)
Frame = +2
Query: 26 SATPAL-PTSLFTNGSLSSPQNISKTELNSF-----VKVSDPAI--YKWRLVIAYDGTKF 181
+A P+L PT+L T S SS ++ ++ S V P + +KWRL+I+YDGT +
Sbjct: 11 AALPSLPPTTLTTLPSSSSNTSVRVRDVGSGGAEHPNTVLKPTVDGFKWRLLISYDGTHY 70
Query: 182 AGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTS 361
GWQ+Q++PPTIQ +LEKALT+ TKL+RK LHLVGA RTD GVHAWGQVAHFVTPFNY S
Sbjct: 71 KGWQFQQTPPTIQCILEKALTRATKLERKDLHLVGASRTDGGVHAWGQVAHFVTPFNYDS 130
Query: 362 LDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHT 541
LDSIHAALNGLLP DIRVREI A V EFHARFS + K Y Y+I++DT MDPFQR AYH
Sbjct: 131 LDSIHAALNGLLPPDIRVREISAVVPEFHARFSAKGKTYHYKIFNDTVMDPFQRLYAYHV 190
Query: 542 AYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTI 664
+KLNA+ MREAA HF+G DFSAF N++R DG P+P+KTI
Sbjct: 191 THKLNAAVMREAANHFIGTRDFSAFVNSSRNDGVPNPVKTI 231
>tr|C5XVS8|C5XVS8_SORBI Pseudouridylate synthase OS=Sorghum bicolor
GN=Sb04g024110 PE=3 SV=1
Length = 201
Score = 264 bits (673), Expect = 2e-068
Identities = 130/201 (64%), Positives = 155/201 (77%)
Frame = +2
Query: 383 LNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNAS 562
+NGLLP +IRVREI AA EFHAR S +SKVYRY+IY++ MDPF AYH+AYKLN
Sbjct: 1 MNGLLPPEIRVREISAARPEFHARTSTKSKVYRYKIYNEAIMDPFHNRYAYHSAYKLNPH 60
Query: 563 KMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQV 742
M+EAA +FVG HDF++FANA D K I+RFDV EMG++LQLEVEG+GF+YRQV
Sbjct: 61 AMQEAANYFVGTHDFTSFANAAHNDRERRSTKKITRFDVTEMGAVLQLEVEGTGFLYRQV 120
Query: 743 RNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKEDHLQLPP 922
RNMVALL+QVGKEAL DIVP I+ +DR+ELAK L APPHGLCL+SV Y E+ L+ P
Sbjct: 121 RNMVALLLQVGKEALPPDIVPAIIAVRDRKELAKVALSAPPHGLCLMSVNYDEEILKPPE 180
Query: 923 DSPLTSFGRHHTITKCKLPFY 985
SP SFGR H ++KCKLPFY
Sbjct: 181 GSPPVSFGRTHHLSKCKLPFY 201
>tr|B4FLG8|B4FLG8_MAIZE Pseudouridylate synthase OS=Zea mays PE=2 SV=1
Length = 201
Score = 262 bits (669), Expect = 6e-068
Identities = 130/201 (64%), Positives = 155/201 (77%)
Frame = +2
Query: 383 LNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNAS 562
+NGLLP +IRVREI AA EFHAR S +SKVYRY+IY++ MDPF H AYH+AYKLN
Sbjct: 1 MNGLLPPEIRVREISAARPEFHARSSTKSKVYRYKIYNEAIMDPFHNHYAYHSAYKLNPH 60
Query: 563 KMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQV 742
M+EAA +FVG HDF++FANA DG P K I+RFDV EMG++LQLEVEG+GF+YRQV
Sbjct: 61 AMQEAANYFVGIHDFTSFANAAHNDGERRPTKKITRFDVTEMGAVLQLEVEGTGFLYRQV 120
Query: 743 RNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKEDHLQLPP 922
RNMVALL+QVGKEAL DIVP I+ +DR+ELAK L APPHGL L+SV Y E+ L+ P
Sbjct: 121 RNMVALLLQVGKEALPPDIVPAIIAARDRKELAKVALSAPPHGLYLMSVNYDEEILKPPE 180
Query: 923 DSPLTSFGRHHTITKCKLPFY 985
SP SFGR H ++KCKL Y
Sbjct: 181 GSPPISFGRTHHLSKCKLTLY 201
>tr|A9RTE3|A9RTE3_PHYPA Pseudouridylate synthase OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_56067 PE=3 SV=1
Length = 299
Score = 258 bits (658), Expect = 1e-066
Identities = 131/254 (51%), Positives = 171/254 (67%)
Frame = +2
Query: 188 WQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSLD 367
WQ Q++ +IQ +E AL++ T+L R +L LVGAGRTDAGVHAWGQVAHF TP + L+
Sbjct: 36 WQIQKNYVSIQEKVEDALSKFTRLPRDELKLVGAGRTDAGVHAWGQVAHFTTPTCFCDLE 95
Query: 368 SIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAY 547
+H +LNG+LP DIR+ E+ + +FHAR+S K Y+Y+ Y MDPFQ AYH
Sbjct: 96 PLHTSLNGILPPDIRILEVSSVQPDFHARYSACRKTYQYKAYVSPVMDPFQHAYAYHIKN 155
Query: 548 KLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGF 727
+N + M EAA +FVG H+FSAFAN + + + D L+ + F V +G L EVEG F
Sbjct: 156 SVNIAAMEEAASYFVGTHNFSAFANHSADTASRDTLRDLLSFTVSSIGPQLLFEVEGKSF 215
Query: 728 MYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKEDH 907
MY+QVRNMV LLVQVGKE + +V IL T+DRRELAK + AP HGL L+SV Y +
Sbjct: 216 MYKQVRNMVGLLVQVGKELVPPSMVRTILLTEDRRELAKISPVAPAHGLYLMSVGYDDKV 275
Query: 908 LQLPPDSPLTSFGR 949
L+ P++P SFGR
Sbjct: 276 LRPVPNAPKASFGR 289
>tr|A5BHS7|A5BHS7_VITVI Pseudouridylate synthase OS=Vitis vinifera
GN=VITISV_020811 PE=3 SV=1
Length = 403
Score = 255 bits (650), Expect = 9e-066
Identities = 119/168 (70%), Positives = 138/168 (82%)
Frame = +2
Query: 185 GWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSL 364
GWQYQ+SPPTIQ ++EKALT+ TKL+R+ L+LVGA RTD GVHAWGQVAHF+TPFNY L
Sbjct: 124 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 183
Query: 365 DSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTA 544
+SIHAALNGLLP DIRVREI AV EFHARFS +SK+Y Y+IY+D MDPF RH YH+
Sbjct: 184 ESIHAALNGLLPPDIRVREISPAVPEFHARFSXKSKIYHYKIYNDAVMDPFLRHYVYHSV 243
Query: 545 YKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVIEM 688
YKLN MREAA+HF GKHDFSAF NA+ D +P+P+K I RFDV EM
Sbjct: 244 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEM 291
Score = 163 bits (410), Expect = 6e-038
Identities = 75/103 (72%), Positives = 88/103 (85%)
Frame = +2
Query: 677 VIEMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLP 856
+I G+LLQLEVEGSGF+YRQVRNMVALL+Q+G+EA+ +IVP IL T+DR+ELAKY L
Sbjct: 301 IIAQGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALS 360
Query: 857 APPHGLCLVSVKYKEDHLQLPPDSPLTSFGRHHTITKCKLPFY 985
APPHGLCL+SVKY E+HLQLP P TS GRHHT+ KCKLPFY
Sbjct: 361 APPHGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 403
>tr|C1ECC9|C1ECC9_9CHLO Pseudouridylate synthase (Fragment) OS=Micromonas sp.
RCC299 GN=MICPUN_71216 PE=3 SV=1
Length = 253
Score = 182 bits (461), Expect = 8e-044
Identities = 106/256 (41%), Positives = 153/256 (59%), Gaps = 9/256 (3%)
Frame = +2
Query: 140 YKWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAW 319
+ + L +AYDG + G+QYQ T+Q +E+ALT++T R+ L + +GRTD GVHA
Sbjct: 1 HTYALKLAYDGEAYLGFQYQPKGKTVQGEVERALTKLTGHDREFLGMQASGRTDTGVHAR 60
Query: 320 GQVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSD 499
GQ+ HF T + L+ H +LNG++P+D+R E+ FHARF K Y Y +
Sbjct: 61 GQILHFYTKEPVSDLERFHKSLNGIMPKDVRCVEVMRPHPAFHARFHAVRKTYHYFLDPR 120
Query: 500 TFMDPFQRHLAYHTAYK-LNASKMREAAQHFVGKHDFSAFANATREDG-APDPLKTISRF 673
+DPF R A H +K + ++REAA FVG HDF++F+N +R+ P +TI RF
Sbjct: 121 LVLDPFVRRHALHCGWKPPSVERLREAAAVFVGTHDFTSFSNKSRDKTLVRSPTRTIYRF 180
Query: 674 DVIEM-GSLLQLEVEGSGFMYRQVRNMVA--LLVQVGKEA-LDSDIVPMILETKDRRELA 841
DV+E L++LEVEG+GF+YR VRNMV +L G++ ++ + +LE KDR
Sbjct: 181 DVVEQPDGLIRLEVEGNGFLYRMVRNMVGALMLAATGEDGKFTAEDLRDMLEGKDR---G 237
Query: 842 KYTLPAPPHGLCLVSV 889
+ APPHGL L V
Sbjct: 238 VAPMGAPPHGLFLHEV 253
>tr|D1R655|D1R655_9CHLA Putative uncharacterized protein OS=Parachlamydia
acanthamoebae str. Hall's coccus GN=pah_c014o179 PE=3 SV=1
Length = 231
Score = 170 bits (430), Expect = 3e-040
Identities = 93/219 (42%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Frame = +2
Query: 245 QITKLQRKQLHLVGAGRTDAGVHAWGQVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREI 424
+I K+ R+ + +V +GRTDAGVHA GQVAHF T L ++NGLLP+DIRV++I
Sbjct: 10 EIGKIVRQPVRVVASGRTDAGVHARGQVAHFSTNAE-IDLRRFLVSINGLLPKDIRVKDI 68
Query: 425 GAAVHEFHARFSCRSKVYRYQIYSDTFMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHD 604
+FHA++S K Y Y + PF R A+H KL+ S+++ AAQ FVG HD
Sbjct: 69 CQVPPDFHAQYSVSGKAYHYHLTLSRVQSPFSRFYAWHIRQKLDLSQLQVAAQLFVGTHD 128
Query: 605 FSAFANATREDGAPDPLKTISRFDVIEMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEA 784
F++FAN + + ++TI R DVI +LE EG GF+Y+ VRNMV +L++V
Sbjct: 129 FTSFANEAHREHPQNAVRTIKRVDVIMEDEGCRLEFEGDGFLYKMVRNMVGILIEVATGY 188
Query: 785 LDSDIVPMILETKDRRELAKYTLPAPPHGLCLVSVKYKE 901
+P I KDR++ K APPHGL L V + E
Sbjct: 189 RPITDIPAIFAAKDRKKAGK---AAPPHGLFLHQVNFPE 224
>tr|C2DZZ6|C2DZZ6_9LACO tRNA pseudouridine synthase A OS=Lactobacillus jensenii
JV-V16 GN=truA PE=3 SV=1
Length = 262
Score = 162 bits (409), Expect = 8e-038
Identities = 95/255 (37%), Positives = 147/255 (57%), Gaps = 9/255 (3%)
Frame = +2
Query: 143 KWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWG 322
++++ +AYDG F G+Q Q + T+Q +E+AL ++ K QR +H G+GRTDAGVHA G
Sbjct: 3 RFKMTMAYDGHLFHGFQKQPNQRTVQGTIEEALKKMAKGQRIVVH--GSGRTDAGVHALG 60
Query: 323 QVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDT 502
QV HF P + + + ALN ++P DI ++ +FH ++S K YRY + D
Sbjct: 61 QVIHFDFPNDNIPANRMVLALNSMMPTDIIFKDAEIVNEDFHVQYSTHGKWYRYIVNQDR 120
Query: 503 FMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVI 682
F+DPF+R H YKLN SKM+EAA +G+HDF++FA + + D ++TI +
Sbjct: 121 FVDPFKRFYTGHYPYKLNVSKMQEAALDLLGEHDFTSFAASGGQ--IIDKVRTIYYVKIW 178
Query: 683 EMGSLLQL--EVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLP 856
+ ++ + G+GF+Y VR MV L+++G E + ++ KDR+E+
Sbjct: 179 QKSEENEIIFDFIGNGFLYNMVRIMVGALLEIGNERRPVHDLKRVILAKDRQEVRN---T 235
Query: 857 APPHGLCLVSVKYKE 901
AP GL L V Y+E
Sbjct: 236 APASGLYLYHVFYEE 250
>tr|C7Y1L6|C7Y1L6_9LACO tRNA pseudouridine synthase A OS=Lactobacillus jensenii
27-2-CHN GN=truA PE=3 SV=1
Length = 262
Score = 162 bits (409), Expect = 8e-038
Identities = 95/255 (37%), Positives = 147/255 (57%), Gaps = 9/255 (3%)
Frame = +2
Query: 143 KWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWG 322
++++ +AYDG F G+Q Q + T+Q +E+AL ++ K QR +H G+GRTDAGVHA G
Sbjct: 3 RFKMTMAYDGHLFHGFQKQPNQRTVQGTIEEALKKMAKGQRIVVH--GSGRTDAGVHALG 60
Query: 323 QVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDT 502
QV HF P + + + ALN ++P DI ++ +FH ++S K YRY + D
Sbjct: 61 QVIHFDFPNDNIPANRMVLALNSMMPTDIIFKDAEIVNEDFHVQYSTHGKWYRYIVNQDR 120
Query: 503 FMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVI 682
F+DPF+R H YKLN SKM+EAA +G+HDF++FA + + D ++TI +
Sbjct: 121 FVDPFKRFYTGHYPYKLNVSKMQEAALDLLGEHDFTSFAASGGQ--IIDKVRTIYYVKIW 178
Query: 683 EMGSLLQL--EVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLP 856
+ ++ + G+GF+Y VR MV L+++G E + ++ KDR+E+
Sbjct: 179 QKSEENEIIFDFIGNGFLYNMVRIMVGALLEIGNERRPVHDLKRVILAKDRQEVIN---T 235
Query: 857 APPHGLCLVSVKYKE 901
AP GL L V Y+E
Sbjct: 236 APASGLYLYHVFYEE 250
>tr|D4YT89|D4YT89_9LACO tRNA pseudouridine synthase A OS=Lactobacillus
amylolyticus DSM 11664 GN=truA PE=3 SV=1
Length = 262
Score = 159 bits (402), Expect = 5e-037
Identities = 98/265 (36%), Positives = 156/265 (58%), Gaps = 16/265 (6%)
Frame = +2
Query: 143 KWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWG 322
++++++AYDG F G+Q Q + T+Q +E+AL ++TK K++ + G+GRTDAGVHA G
Sbjct: 4 RYKMLMAYDGHLFHGFQVQPNQRTVQGTVEEALKKMTK--GKRVIVEGSGRTDAGVHAMG 61
Query: 323 QVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDT 502
QV F P N + + ALN ++P DI +E A +FH R+S + K YRY++ D
Sbjct: 62 QVIQFDYPGNRIPAEKMILALNSMMPMDIIFKECEIASPDFHVRYSIKGKWYRYRMSLDH 121
Query: 503 FMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDVI 682
F++PF+R H Y ++ SKM+EAA+ +GKHDF++FA + + + ++T+ +V
Sbjct: 122 FVNPFKRFYTGHYPYPIDVSKMKEAAKDLLGKHDFTSFAASGGQ--IKNKVRTMYYVNVE 179
Query: 683 EMGSLLQLEVE--GSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLP 856
+ S +L + SGF+Y VR +VA L+++G P I++ KDR ++ T
Sbjct: 180 KNESQNELVFDFICSGFLYNMVRILVATLLEIGSGKRPVHDFPRIIKAKDRLQV---TQT 236
Query: 857 APPHGLCLVSV-------KYKEDHL 910
AP GL L V KY++D L
Sbjct: 237 APASGLYLYHVFYDKLPDKYRQDLL 261
>tr|C2EQX8|C2EQX8_9LACO tRNA pseudouridine synthase A OS=Lactobacillus
ultunensis DSM 16047 GN=truA PE=3 SV=1
Length = 262
Score = 159 bits (401), Expect = 7e-037
Identities = 94/255 (36%), Positives = 149/255 (58%), Gaps = 9/255 (3%)
Frame = +2
Query: 143 KWRLVIAYDGTKFAGWQYQESPPTIQSMLEKALTQITKLQRKQLHLVGAGRTDAGVHAWG 322
++++ +AYDG F G+Q Q T+Q +E AL ++TK K++ + G+GRTDAGVHA G
Sbjct: 4 RYKMTMAYDGHLFHGFQLQPDQRTVQGTVEDALKKMTK--GKRVIVQGSGRTDAGVHAIG 61
Query: 323 QVAHFVTPFNYTSLDSIHAALNGLLPQDIRVREIGAAVHEFHARFSCRSKVYRYQIYSDT 502
QV HF P + + A+N ++P DI + +FHAR+S + K YRY++ D
Sbjct: 62 QVIHFDYPGKTIPANRMILAMNSMMPMDIIFNKCQIVDEDFHARYSIKGKWYRYRVSLDH 121
Query: 503 FMDPFQRHLAYHTAYKLNASKMREAAQHFVGKHDFSAFANATREDGAPDPLKTISRFDV- 679
F++PF+R H Y+LN SKM+EAA+ +GKHDF++FA + + D ++TI ++
Sbjct: 122 FVNPFKRFYTGHFPYQLNISKMQEAARDLLGKHDFTSFAASGGQ--IEDKVRTIYYVNIE 179
Query: 680 -IEMGSLLQLEVEGSGFMYRQVRNMVALLVQVGKEALDSDIVPMILETKDRRELAKYTLP 856
E + + + GSGF+Y VR MVA L+++G + ++ KDR+E+ +
Sbjct: 180 KDEKENEVIFDFIGSGFLYNMVRIMVAALLEIGNGRRPIHDLKRVISAKDRQEVRQ---T 236
Query: 857 APPHGLCLVSVKYKE 901
A GL L V Y++
Sbjct: 237 AQASGLYLYHVFYED 251
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,303,052,906,266
Number of Sequences: 11397958
Number of Extensions: 2303052906266
Number of Successful Extensions: 819112179
Number of sequences better than 0.0: 0
|
