BLASTX 7.6.2
Query= UN27984 /QuerySize=1053
(1052 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53849|GIS2_YEAST Zinc finger protein GIS2 OS=Saccharomyces c... 94 2e-018
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 89 6e-017
sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 73 3e-012
sp|Q05313|GAG_FIVWO Gag polyprotein OS=Feline immunodeficiency v... 59 5e-008
sp|P31821|GAG_FIVT2 Gag polyprotein OS=Feline immunodeficiency v... 58 1e-007
>sp|P53849|GIS2_YEAST Zinc finger protein GIS2 OS=Saccharomyces cerevisiae
GN=GIS2 PE=1 SV=1
Length = 153
Score = 94 bits (231), Expect = 2e-018
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Frame = +2
Query: 383 RCWNCREPGHVASNCSNEGICHSCGKTGHRARDCTNPVSRAGDLRL-CNNCFKPGHLVAD 559
+C+NC E GHV S C+ + C +C +TGH +R+C P + ++ C C P H+ D
Sbjct: 48 QCYNCGETGHVRSECTVQR-CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKD 106
Query: 560 CTNDKA-----CKNCRTSGHIARDCQNDPVCNICSISGHVARNCPK 682
C + C C +GH++RDCQND +C C+ +GH++++CPK
Sbjct: 107 CMKEDGISGLKCYTCGQAGHMSRDCQNDRLCYNCNETGHISKDCPK 152
Score = 82 bits (202), Expect = 4e-015
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Frame = +2
Query: 329 CNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGI-----CHSCGKTGHRARDCTNP 493
C CG GH+A +C +E C+NC +PGHV ++C+ C++CG+TGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECT-- 63
Query: 494 VSRAGDLRLCNNCFKPGHLVADCTNDK--------ACKNCRTSGHIARDCQNDPVCNICS 649
++ C NC + GH+ +C K +C C H+A+DC +
Sbjct: 64 ------VQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKED-----G 112
Query: 650 ISGHVARNCPKGDSSYSDRDRDR 718
ISG C + D DR
Sbjct: 113 ISGLKCYTCGQAGHMSRDCQNDR 135
>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP
PE=4 SV=1
Length = 271
Score = 89 bits (218), Expect = 6e-017
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Frame = +2
Query: 224 RRGDREPRRAFSQTNLCNNCKRPGHFARDCPNVSVCNNCGLPGHIAAECTAESRCWNCRE 403
+RG + +S C C GH +RDCPN G G+ A + C+ C +
Sbjct: 126 KRGRSGAQGGYSGDRTCYKCGDAGHISRDCPN-------GQGGYSGA---GDRTCYKCGD 175
Query: 404 PGHVASNCSN---------EGICHSCGKTGHRARDCTNPVSRAGDLRLCNNCFKPGHLVA 556
GH++ +C N + C+ CG++GH +R+C + S R C C KPGH+
Sbjct: 176 AGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISR 235
Query: 557 DCT------------NDKACKNCRTSGHIARDC 619
+C D+ C C +GHI+RDC
Sbjct: 236 ECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1
Length = 179
Score = 73 bits (177), Expect = 3e-012
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Frame = +2
Query: 272 CNNCKRPGHFARDCPNVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGICHS 451
C C R GH ARDC + GH + C+ C GH A +C+ C+S
Sbjct: 85 CYKCGRVGHIARDCRTNGQQSGGRFGGH-----RSNMNCYACGSYGHQARDCTMGVKCYS 139
Query: 452 CGKTGHRARDCTNPVSRAGDLRLCNNCFKPGHLVADCTN 568
CGK GHR+ +C +A D +LC C +PGH+ +CT+
Sbjct: 140 CGKIGHRSFEC----QQASDGQLCYKCNQPGHIAVNCTS 174
>sp|Q05313|GAG_FIVWO Gag polyprotein OS=Feline immunodeficiency virus (isolate
Wo) GN=gag PE=3 SV=1
Length = 450
Score = 59 bits (141), Expect = 5e-008
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 269 LCNNCKRPGHFARDCPNVSVCNNCGLPGHIAAEC 370
+C NCKRPGH AR C +V CN CG PGH+AA+C
Sbjct: 376 VCFNCKRPGHLARQCRDVKKCNKCGKPGHLAAKC 409
>sp|P31821|GAG_FIVT2 Gag polyprotein OS=Feline immunodeficiency virus (isolate
TM2) GN=gag PE=3 SV=1
Length = 449
Score = 58 bits (138), Expect = 1e-007
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2
Query: 269 LCNNCKRPGHFARDCPNVSVCNNCGLPGHIAAEC 370
+C NCK+PGH AR C CNNCG PGH+AA C
Sbjct: 376 VCFNCKKPGHLARQCKEAKRCNNCGKPGHLAANC 409
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,323,427,680
Number of Sequences: 518415
Number of Extensions: 116323427680
Number of Successful Extensions: 743337835
Number of sequences better than 0.0: 0
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