BLASTX 7.6.2

Query= UN28031 /QuerySize=1640
        (1639 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G02820.1 | Symbols: RHL2, BIN5 | RHL2 (ROOT HA...    448   6e-126
TAIR9_protein||AT5G02830.1 | Symbols:  | pentatricopeptide (PPR)...    239   6e-063
TAIR9_protein||AT3G13170.1 | Symbols: ATSPO11-1 | ATSPO11-1; ATP...    178   1e-044
TAIR9_protein||AT1G63990.1 | Symbols: SPO11-2 | SPO11-2 (SPORULA...    152   9e-037

>TAIR9_protein||AT5G02820.1 | Symbols: RHL2, BIN5 | RHL2 (ROOT HAIRLESS 2); ATP
        binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ identical
        protein binding / protein binding | chr5:642658-644123 FORWARD

          Length = 428

 Score =  448 bits (1151), Expect = 6e-126
 Identities = 221/224 (98%), Positives = 222/224 (99%)
 Frame = +2

Query:   2 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 181
           AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY+RL
Sbjct: 205 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYMRL 264

Query: 182 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 361
           AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS
Sbjct: 265 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 324

Query: 362 KNMSYYSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPG 541
           KNMSY SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPG
Sbjct: 325 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPG 384

Query: 542 WVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL* 673
           WVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL*
Sbjct: 385 WVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL* 428

>TAIR9_protein||AT5G02830.1 | Symbols:  | pentatricopeptide (PPR)
        repeat-containing protein | chr5:644458-648421 REVERSE

          Length = 853

 Score =  239 bits (608), Expect = 6e-063
 Identities = 132/185 (71%), Positives = 151/185 (81%), Gaps = 9/185 (4%)
 Frame = -2

Query: 1482 CYATAPEHSQSINKASDQEGTDSGRPVSLLIEKVARHLQERTSGHLAIDLQGLTKVEARL 1303
            C     E+ QS +K SDQEG ++GRPVSLLIEKVA H+QERT+G+LAIDLQGLTK+EARL
Sbjct:  678 CEGVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAIDLQGLTKIEARL 737

Query: 1302 VVLAVLRMIKEDYTRGDVVKDDLVIILGTCEANTDSGKQEIDVKDVLVKLLKDELSLVVL 1123
            VVLAVLRMIKEDY RGDVV DD++II+GT EANT SGKQEI V++ LVKLL+DELSLVVL
Sbjct:  738 VVLAVLRMIKEDYMRGDVVIDDVLIIIGTDEANTVSGKQEITVQEALVKLLRDELSLVVL 797

Query: 1122 PARQRPVLDITQDAQHVDDADQNTEHTSKNTKWIVGIFSTRRPAILERLMVTKASLHKWL 943
            PA QR   +I QDA  VDDADQ      +NTK  V I STRRPAILERLMVTKASL++WL
Sbjct:  798 PAGQR---NIIQDAHCVDDADQ------ENTKSFVSISSTRRPAILERLMVTKASLYQWL 848

Query:  942 QRKK* 928
            QR+K*
Sbjct:  849 QRRK* 853


 Score =  57 bits (136), Expect = 3e-008
 Identities = 29/41 (70%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
 Frame = -2

Query: 1557 MRDLVIVFGSSSSVITNPHHHHHRRCYATAPEHSQSINKAS 1435
            MRD VIVFGSSS+ ITNP HHHHRRCYATAPE ++     S
Sbjct:    1 MRDFVIVFGSSSA-ITNP-HHHHRRCYATAPESNRKTKSNS 39

>TAIR9_protein||AT3G13170.1 | Symbols: ATSPO11-1 | ATSPO11-1; ATP binding / DNA
        binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic |
        chr3:4231560-4234192 REVERSE

          Length = 363

 Score =  178 bits (450), Expect = 1e-044
 Identities = 95/218 (43%), Positives = 134/218 (61%), Gaps = 1/218 (0%)
 Frame = +2

Query:  11 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 190
           G+V+G L F + G   DC         +P  ++ V D+ S A +IL+VEK+  + RLA D
Sbjct: 141 GLVMGWLKFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLAND 200

Query: 191 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNM 370
            F     CI++T +G PDV+TR FLR +  +L LPV  LVD DPYG +IL+ Y  GS  M
Sbjct: 201 MFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQM 260

Query: 371 SYYSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKN-PGWV 547
           +Y   +L  PD+KWLG  PSD + Y +P+QC LP+TE+D K  + ML   ++K+  P W 
Sbjct: 261 AYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQWR 320

Query: 548 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQ 661
            EL  M+K   K EI+ALS     +LSEVY+P K++++
Sbjct: 321 LELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIRRE 358

>TAIR9_protein||AT1G63990.1 | Symbols: SPO11-2 | SPO11-2 (SPORULATION 11-2); ATP
        binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic
        | chr1:23743323-23745351 REVERSE

          Length = 384

 Score =  152 bits (382), Expect = 9e-037
 Identities = 87/220 (39%), Positives = 136/220 (61%), Gaps = 10/220 (4%)
 Frame = +2

Query:  11 GVVVGRLIFSDNG-DMIDCTKMGMGGKAIPPNIDRVGD--MQSDAMFILLVEKDAAYIRL 181
           G+V GRL   + G + +DC+  G  G AI  +++ + +  M++DA +I++VEK A + RL
Sbjct: 166 GLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMRTDARYIIIVEKHAIFHRL 225

Query: 182 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCG 358
            EDR +N  PC+ +TAKG PD+ATR FL +M      LP+L LVD +P GL IL  +  G
Sbjct: 226 VEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLVDWNPAGLAILCTFKFG 285

Query: 359 SKNMSYYSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNP 538
           S  M    A     ++KW+G+R  DL+   IPE+  +P+  +D +  K +L    +++N 
Sbjct: 286 SIGMG-LEAYRYACNVKWIGLRGDDLN--LIPEESLVPLKPKDSQIAKSLLSSKILQEN- 341

Query: 539 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 658
            ++EEL+LMV+T ++AEI+AL   G+ YL + Y+  K+ Q
Sbjct: 342 -YIEELSLMVQTGKRAEIEALYCHGYNYLGK-YIATKIVQ 379

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,534,877,335
Number of Sequences: 33410
Number of Extensions: 14534877335
Number of Successful Extensions: 466470437
Number of sequences better than 0.0: 0