BLASTX 7.6.2
Query= UN28084 /QuerySize=744
(743 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G29520.1 | Symbols: | AWPM-19-like membrane f... 299 2e-081
TAIR9_protein||AT5G46530.1 | Symbols: | FUNCTIONS IN: molecular... 248 3e-066
TAIR9_protein||AT5G18970.1 | Symbols: | AWPM-19-like membrane f... 141 6e-034
TAIR9_protein||AT1G04560.1 | Symbols: | AWPM-19-like membrane f... 96 3e-020
>TAIR9_protein||AT1G29520.1 | Symbols: | AWPM-19-like membrane family protein |
chr1:10323735-10324525 FORWARD
Length = 159
Score = 299 bits (763), Expect = 2e-081
Identities = 148/158 (93%), Positives = 155/158 (98%)
Frame = +3
Query: 51 MAGEQMKPVASLLLVLNFCMYVIVLGIGGWAMNRAIDHGFEIGPDLKLPAHFSPIYFPMG 230
MAGEQ+KPVAS LLVLNFCMYVIVLGIGGWAMNRAIDHGFE+GP+L+LPAHFSPIYFPMG
Sbjct: 1 MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60
Query: 231 NAATGFFVVFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 410
NAATGFFV+FALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK
Sbjct: 61 NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120
Query: 411 EIELHVRNARLRTMEAFLIILSVTQLLYIAAVHGVRRP 524
EIEL RNA+LRTMEAFLIILSVTQL+YIAAVHGVRRP
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHGVRRP 158
>TAIR9_protein||AT5G46530.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like
(InterPro:IPR008390); BEST Arabidopsis thaliana protein match is:
AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast
hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr5:18875576-18876779 FORWARD
Length = 158
Score = 248 bits (632), Expect = 3e-066
Identities = 121/157 (77%), Positives = 138/157 (87%)
Frame = +3
Query: 51 MAGEQMKPVASLLLVLNFCMYVIVLGIGGWAMNRAIDHGFEIGPDLKLPAHFSPIYFPMG 230
M QMKPVAS LLVLNFCMY IVLGIG W+MN+AI+HGF IG D LPAHFSPI+FPMG
Sbjct: 1 MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60
Query: 231 NAATGFFVVFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 410
NAATGFF++FAL+AGV GAAS ISG+SH++SWT SLPAA +AATIAW+LT+LAMGF K
Sbjct: 61 NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120
Query: 411 EIELHVRNARLRTMEAFLIILSVTQLLYIAAVHGVRR 521
EIEL +RNARLRTMEAFLIILS TQLLYIAA++GVR+
Sbjct: 121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYGVRK 157
>TAIR9_protein||AT5G18970.1 | Symbols: | AWPM-19-like membrane family protein |
chr5:6333714-6334539 REVERSE
Length = 172
Score = 141 bits (354), Expect = 6e-034
Identities = 71/153 (46%), Positives = 99/153 (64%)
Frame = +3
Query: 51 MAGEQMKPVASLLLVLNFCMYVIVLGIGGWAMNRAIDHGFEIGPDLKLPAHFSPIYFPMG 230
MA K A +LL+LN +Y ++ I WA+N I+ E L LPA PIYFP+G
Sbjct: 1 MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60
Query: 231 NAATGFFVVFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 410
N ATGFFV+F L+AGVVG A++++G+ ++ W +L +AA ++ I+W+LT+LAMG A K
Sbjct: 61 NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120
Query: 411 EIELHVRNARLRTMEAFLIILSVTQLLYIAAVH 509
EI + A LRT+E II+S TQLL A+H
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIH 153
>TAIR9_protein||AT1G04560.1 | Symbols: | AWPM-19-like membrane family protein |
chr1:1245070-1245888 FORWARD
Length = 187
Score = 96 bits (236), Expect = 3e-020
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 GNAATGFFVVFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAW 407
GN AT FF+ F++LA VVG AS ++G +HIR W SL AA ++ +AW +T LAMG A
Sbjct: 47 GNGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLAC 106
Query: 408 KEIEL-HVRNARLRTMEAFLIILSVTQLLYIAAVH 509
K+I + R RL+ +EAF+IIL+ TQLLY+ +H
Sbjct: 107 KQINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIH 141
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,619,950,576
Number of Sequences: 33410
Number of Extensions: 14619950576
Number of Successful Extensions: 471640795
Number of sequences better than 0.0: 0
|