Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN28205


BLASTX 7.6.2

Query= UN28205 /QuerySize=855
        (854 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18394294|ref|NP_563984.1| Mitochondrial glycoprotein family p...    217   2e-054
gi|297844502|ref|XP_002890132.1| mitochondrial glycoprotein fami...    214   2e-053
gi|297842791|ref|XP_002889277.1| hypothetical protein ARALYDRAFT...    182   7e-044
gi|21618310|gb|AAM67360.1| unknown [Arabidopsis thaliana]              175   1e-041
gi|18412890|ref|NP_565244.1| Mitochondrial glycoprotein family p...    172   7e-041
gi|224057557|ref|XP_002299266.1| predicted protein [Populus tric...    156   7e-036
gi|255572765|ref|XP_002527315.1| conserved hypothetical protein ...    155   1e-035
gi|225443095|ref|XP_002274018.1| PREDICTED: hypothetical protein...    137   3e-030
gi|297743612|emb|CBI36479.3| unnamed protein product [Vitis vini...    137   3e-030
gi|224141941|ref|XP_002324319.1| predicted protein [Populus tric...    121   2e-025
gi|255640346|gb|ACU20461.1| unknown [Glycine max]                      119   7e-025
gi|255548788|ref|XP_002515450.1| conserved hypothetical protein ...    119   9e-025
gi|296082082|emb|CBI21087.3| unnamed protein product [Vitis vini...    117   2e-024
gi|225430382|ref|XP_002285343.1| PREDICTED: hypothetical protein...    117   2e-024

>gi|18394294|ref|NP_563984.1| Mitochondrial glycoprotein family protein
        [Arabidopsis thaliana]

          Length = 242

 Score =  217 bits (552), Expect = 2e-054
 Identities = 104/117 (88%), Positives = 113/117 (96%), Gaps = 1/117 (0%)
 Frame = -1

Query: 431 KVCSSDPEDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVG 252
           K  +SDPEDVQLHITF+VNISK GDG+TLE+MCSAWPDTIQI+KFFVRKSS+NSPNAY+G
Sbjct: 127 KSTTSDPEDVQLHITFIVNISK-GDGETLEIMCSAWPDTIQITKFFVRKSSQNSPNAYIG 185

Query: 251 PEFEEMEDELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           PEF+EMEDELQDSVY+FLEERGISDDLA FLHQYMKNKDKAEYIRWMETVKSYVEQK
Sbjct: 186 PEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWMETVKSYVEQK 242


 Score =  187 bits (474), Expect = 2e-045
 Identities = 96/128 (75%), Positives = 109/128 (85%), Gaps = 1/128 (0%)
 Frame = -2

Query: 808 SRLVRCLRRTVISTNLSPSFSCRNHRVCVQPIQNPSLLIVPKFLSSGSYASEMRKSAFEG 629
           +RL+RCLRR+ I ++ S S + RN R+CVQ  Q+   L   KFLSSGSY SEMR++AFEG
Sbjct:   2 ARLLRCLRRSFIFSS-STSIAYRNPRICVQSNQSYIFLSSRKFLSSGSYVSEMRRTAFEG 60

Query: 628 NILRLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDIKIEATMFD 449
           NILRLIR EIQSELDHSP LQPEE FGPFTVDERPGEQW+SLRRK+G+KEDIKIEATMFD
Sbjct:  61 NILRLIRLEIQSELDHSPILQPEESFGPFTVDERPGEQWISLRRKFGEKEDIKIEATMFD 120

Query: 448 GSVPSSKS 425
           GSVPSSKS
Sbjct: 121 GSVPSSKS 128

>gi|297844502|ref|XP_002890132.1| mitochondrial glycoprotein family protein
        [Arabidopsis lyrata subsp. lyrata]

          Length = 242

 Score =  214 bits (544), Expect = 2e-053
 Identities = 104/117 (88%), Positives = 110/117 (94%), Gaps = 1/117 (0%)
 Frame = -1

Query: 431 KVCSSDPEDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVG 252
           K  SSDP+DVQLHITF+VNISK GDG TLE+MCSAWPDTIQISKFFVRKSSKNSPN+Y G
Sbjct: 127 KSTSSDPQDVQLHITFIVNISK-GDGGTLEIMCSAWPDTIQISKFFVRKSSKNSPNSYTG 185

Query: 251 PEFEEMEDELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           PEF+EMEDELQDSVY+FLEERGISDDLA FLHQYMKNKDKAEYIRWME VKSYVEQK
Sbjct: 186 PEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWMEAVKSYVEQK 242


 Score =  201 bits (511), Expect = 1e-049
 Identities = 102/130 (78%), Positives = 115/130 (88%), Gaps = 1/130 (0%)
 Frame = -2

Query: 808 SRLVRCLRRTVISTNLSPSFSCRNHRVCVQPIQNPSLLIVPKFLSSGSYASEMRKSAFEG 629
           +RL+RCLRR+VI ++ SPS S RN R+CVQ  QNPS LI  KFLSSGSY SEMRKSAF+G
Sbjct:   2 ARLLRCLRRSVILSS-SPSISYRNPRICVQSNQNPSFLISRKFLSSGSYVSEMRKSAFQG 60

Query: 628 NILRLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDIKIEATMFD 449
           NILRLIRSEIQSELDHSP L+ E++FGPFTVDERPGEQW+SLRR +GDKEDIKIEATMFD
Sbjct:  61 NILRLIRSEIQSELDHSPILKLEDRFGPFTVDERPGEQWISLRRNFGDKEDIKIEATMFD 120

Query: 448 GSVPSSKSAA 419
           GSVPSSKS +
Sbjct: 121 GSVPSSKSTS 130

>gi|297842791|ref|XP_002889277.1| hypothetical protein ARALYDRAFT_340150
        [Arabidopsis lyrata subsp. lyrata]

          Length = 242

 Score =  182 bits (461), Expect = 7e-044
 Identities = 91/128 (71%), Positives = 107/128 (83%), Gaps = 1/128 (0%)
 Frame = -2

Query: 808 SRLVRCLRRTVISTNLSPSFSCRNHRVCVQPIQNPSLLIVPKFLSSGSYASEMRKSAFEG 629
           +R VRCLRRT+ S N SPS + R+ R+ +   QNP  LI  + LSSGSY SEM+KSAF+G
Sbjct:   2 ARFVRCLRRTLFS-NSSPSIAYRSPRIGLPSNQNPKFLISRRCLSSGSYVSEMQKSAFQG 60

Query: 628 NILRLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDIKIEATMFD 449
           NILRLIR+EI+ ELDHSPPLQP + FGPFTVDERPGEQW+SL+RK+GDKEDIKIEATMFD
Sbjct:  61 NILRLIRNEIEYELDHSPPLQPPDSFGPFTVDERPGEQWISLKRKFGDKEDIKIEATMFD 120

Query: 448 GSVPSSKS 425
            SVP+SKS
Sbjct: 121 RSVPTSKS 128


 Score =  170 bits (430), Expect = 3e-040
 Identities = 78/109 (71%), Positives = 94/109 (86%)
 Frame = -1

Query: 407 DVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEMED 228
           D  LHITF+VNISK G  + LE+MCSAWPDTI+ISK  +RK    S ++Y GPEFEE++D
Sbjct: 134 DYILHITFIVNISKGGASEVLEIMCSAWPDTIEISKLCIRKGINTSASSYGGPEFEELDD 193

Query: 227 ELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           +LQD++YQFLEERGISD+LAVFLH+YMKNK KAEY+RWME+VKSYVEQK
Sbjct: 194 QLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQK 242

>gi|21618310|gb|AAM67360.1| unknown [Arabidopsis thaliana]

          Length = 240

 Score =  175 bits (442), Expect = 1e-041
 Identities = 88/125 (70%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = -2

Query: 799 VRCLRRTVISTNLSPSFSCRNHRVCVQPIQNPSLLIVPKFLSSGSYASEMRKSAFEGNIL 620
           VRCLRRT+ S N SPS + R+ R+ +    NP +LI  + LSSGSY SEM+KSAF+GNIL
Sbjct:   3 VRCLRRTLFS-NSSPSIAHRSPRIGLPTNLNPKILISRRCLSSGSYVSEMQKSAFQGNIL 61

Query: 619 RLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDIKIEATMFDGSV 440
           RLIR+EI+ ELDHSPPLQP   FGPFTVDERPGEQW+SL+R +GDKEDIKIEATMFD SV
Sbjct:  62 RLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDIKIEATMFDRSV 121

Query: 439 PSSKS 425
           P+SKS
Sbjct: 122 PTSKS 126


 Score =  172 bits (435), Expect = 7e-041
 Identities = 80/117 (68%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 431 KVCSSDPEDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVG 252
           K   ++PE + LHITF+VNISK G  + LE+MCSAWPDTI+ISK  +R+    SP++Y G
Sbjct: 125 KSTKTEPEYI-LHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIRRGINTSPSSYGG 183

Query: 251 PEFEEMEDELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           PEFEE++D+LQD++YQFLEERGISD+LAVFLH+YMKNK KAEY+RWME+VKSYVEQK
Sbjct: 184 PEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQK 240

>gi|18412890|ref|NP_565244.1| Mitochondrial glycoprotein family protein
        [Arabidopsis thaliana]

          Length = 190

 Score =  172 bits (435), Expect = 7e-041
 Identities = 80/117 (68%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 431 KVCSSDPEDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVG 252
           K   ++PE + LHITF+VNISK G  + LE+MCSAWPDTI+ISK  +R+    SP++Y G
Sbjct:  75 KSTKTEPEYI-LHITFIVNISKAGATEALEIMCSAWPDTIEISKLCIRRGINTSPSSYGG 133

Query: 251 PEFEEMEDELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           PEFEE++D+LQD++YQFLEERGISD+LAVFLH+YMKNK KAEY+RWME+VKSYVEQK
Sbjct: 134 PEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQK 190


 Score =  134 bits (335), Expect = 3e-029
 Identities = 62/76 (81%), Positives = 70/76 (92%)
 Frame = -2

Query: 652 MRKSAFEGNILRLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDI 473
           M+KSAF+GNILRLIR+EI+ ELDHSPPLQP   FGPFTVDERPGEQW+SL+R +GDKEDI
Sbjct:   1 MQKSAFQGNILRLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDI 60

Query: 472 KIEATMFDGSVPSSKS 425
           KIEATMFD SVP+SKS
Sbjct:  61 KIEATMFDRSVPTSKS 76

>gi|224057557|ref|XP_002299266.1| predicted protein [Populus trichocarpa]

          Length = 251

 Score =  156 bits (392), Expect = 7e-036
 Identities = 67/110 (60%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           ED+ LHIT ++NI K GDG  LE++CSAWPD+I+I+K F+R+S+K S   Y GPEF+E++
Sbjct: 143 EDMLLHITLIINILK-GDGDVLEILCSAWPDSIEITKLFIRRSNKTSHQVYDGPEFKELD 201

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           DELQD++Y+FLE RGI+D++A+FLH+Y++NK K E+IRWM TVKSY+E K
Sbjct: 202 DELQDTLYEFLEARGINDEMAIFLHEYIRNKGKTEFIRWMGTVKSYIESK 251

>gi|255572765|ref|XP_002527315.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 238

 Score =  155 bits (390), Expect = 1e-035
 Identities = 69/109 (63%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
 Frame = -1

Query: 407 DVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEMED 228
           +VQLHIT +VNI K GDG  LE+MCSAWP++I+I+K F+R S K    AYVGP+F+E++D
Sbjct: 131 NVQLHITLIVNILK-GDGDALEIMCSAWPNSIEITKLFIRGSVKMPDKAYVGPDFKELDD 189

Query: 227 ELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           ELQ+S+Y+FLE RGI D++A FLH+YMKNK + EYIRW++TVKSY+E+K
Sbjct: 190 ELQESLYEFLEARGIDDEMAAFLHEYMKNKGRTEYIRWIDTVKSYIEKK 238


 Score =  119 bits (298), Expect = 5e-025
 Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 10/127 (7%)
 Frame = -2

Query: 805 RLVRCLRRTVIST--NLSPSFSCRNHRVCVQPIQNP-SLLIVP-KFLSSGSYASEMRKSA 638
           RL+R ++RT+IST   L P      H+  +Q  QNP S L  P +F+ + +Y SEMRKSA
Sbjct:   3 RLIRTMKRTLISTPKTLIPQL----HQQLLQ--QNPISELKDPFQFVLTRNYISEMRKSA 56

Query: 637 FEGNILRLIRSEIQSELDHSPPLQPEEKFGPFTVDERPGEQWVSLRRKYGDKEDIKIEAT 458
           F+ NILRL+R+EIQ ELD +PP Q   KF  F +DERPGEQW++L+ K+ + E+IK+EAT
Sbjct:  57 FQDNILRLLRNEIQYELDRAPPKQLVTKFKSFAIDERPGEQWITLKTKFAESEEIKVEAT 116

Query: 457 MFDGSVP 437
           MFDG++P
Sbjct: 117 MFDGAIP 123

>gi|225443095|ref|XP_002274018.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 239

 Score =  137 bits (343), Expect = 3e-030
 Identities = 59/110 (53%), Positives = 82/110 (74%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           ++V+LHIT +VNISK      LE +CSAWP +++I    V          Y+ P+F++++
Sbjct: 130 QEVELHITLIVNISKGEGSDVLEFVCSAWPQSVEIVNVLVHGKDGRPNQLYMSPKFKDLD 189

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           DELQ+S+Y+FLE RGI DDLA+F+H+YMKNKDK E+IRWM TVKS++EQK
Sbjct: 190 DELQESLYEFLETRGIDDDLAIFVHEYMKNKDKTEFIRWMGTVKSFIEQK 239

>gi|297743612|emb|CBI36479.3| unnamed protein product [Vitis vinifera]

          Length = 193

 Score =  137 bits (343), Expect = 3e-030
 Identities = 59/110 (53%), Positives = 82/110 (74%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           ++V+LHIT +VNISK      LE +CSAWP +++I    V          Y+ P+F++++
Sbjct:  84 QEVELHITLIVNISKGEGSDVLEFVCSAWPQSVEIVNVLVHGKDGRPNQLYMSPKFKDLD 143

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQK 81
           DELQ+S+Y+FLE RGI DDLA+F+H+YMKNKDK E+IRWM TVKS++EQK
Sbjct: 144 DELQESLYEFLETRGIDDDLAIFVHEYMKNKDKTEFIRWMGTVKSFIEQK 193

>gi|224141941|ref|XP_002324319.1| predicted protein [Populus trichocarpa]

          Length = 189

 Score =  121 bits (302), Expect = 2e-025
 Identities = 51/109 (46%), Positives = 79/109 (72%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           EDV+LHI+F+V++SK   G+ LE +CSAWPD ++I K ++ +  K     Y+GP+F ++ 
Sbjct:  81 EDVRLHISFIVDVSKGDGGENLEFLCSAWPDRLEIQKVYLLRGEKMPGRPYMGPDFRKLN 140

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQ 84
            ELQ  + ++LE RG++D+L+ FLH YM NKD+ E I+W+  VKS+VE+
Sbjct: 141 KELQKRLREYLEARGVNDELSFFLHDYMLNKDRIELIQWLGKVKSFVEK 189

>gi|255640346|gb|ACU20461.1| unknown [Glycine max]

          Length = 210

 Score =  119 bits (297), Expect = 7e-025
 Identities = 53/91 (58%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           +++Q+HIT +VNISK G+G+ LE+MCSAWPD+I+I + F+R + K     Y GPEF E++
Sbjct: 121 DEMQMHITVIVNISK-GEGRVLEIMCSAWPDSIEIKRLFIRANEKIIAEPYAGPEFTELD 179

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNK 138
           DELQD +Y FLE RGI+D+LA FLHQYMK +
Sbjct: 180 DELQDKLYDFLEVRGINDELADFLHQYMKTR 210

>gi|255548788|ref|XP_002515450.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 225

 Score =  119 bits (296), Expect = 9e-025
 Identities = 53/112 (47%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
 Frame = -1

Query: 419 SDPEDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFE 240
           S  EDV+LHI+ +V+ISK+GD  +LE +CS+WPD ++I K ++ +        Y+GP+F 
Sbjct: 116 SSGEDVRLHISLLVDISKNGD--SLEFVCSSWPDRLEIHKVYLLRRDHELSRPYMGPDFR 173

Query: 239 EMEDELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQ 84
            +  ELQ  + ++LEERG++D+L+VFLH+YM NKD+ E I+W   VKS+VE+
Sbjct: 174 NLNGELQKRLREYLEERGVNDELSVFLHEYMTNKDRIELIQWFANVKSFVEK 225

>gi|296082082|emb|CBI21087.3| unnamed protein product [Vitis vinifera]

          Length = 250

 Score =  117 bits (293), Expect = 2e-024
 Identities = 49/109 (44%), Positives = 83/109 (76%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           ++++ HI+ +V+ISK  D   LE +CSAWPD+++I K F+ +  +  P  ++GP F+ ++
Sbjct: 142 QELRPHISLLVDISKGEDCDMLEFVCSAWPDSLEIQKVFIYRHGRLLPRPWLGPGFKSLD 201

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQ 84
            +LQ+++ +FLEERG++D+L+VFLH+YM NKD+ E I+W+  VKS+VE+
Sbjct: 202 YKLQNALCEFLEERGVNDELSVFLHEYMMNKDRTELIQWLRNVKSFVEK 250

>gi|225430382|ref|XP_002285343.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 252

 Score =  117 bits (293), Expect = 2e-024
 Identities = 49/109 (44%), Positives = 83/109 (76%)
 Frame = -1

Query: 410 EDVQLHITFVVNISKDGDGQTLEVMCSAWPDTIQISKFFVRKSSKNSPNAYVGPEFEEME 231
           ++++ HI+ +V+ISK  D   LE +CSAWPD+++I K F+ +  +  P  ++GP F+ ++
Sbjct: 144 QELRPHISLLVDISKGEDCDMLEFVCSAWPDSLEIQKVFIYRHGRLLPRPWLGPGFKSLD 203

Query: 230 DELQDSVYQFLEERGISDDLAVFLHQYMKNKDKAEYIRWMETVKSYVEQ 84
            +LQ+++ +FLEERG++D+L+VFLH+YM NKD+ E I+W+  VKS+VE+
Sbjct: 204 YKLQNALCEFLEERGVNDELSVFLHEYMMNKDRTELIQWLRNVKSFVEK 252

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,347,872,817,511
Number of Sequences: 15229318
Number of Extensions: 3347872817511
Number of Successful Extensions: 807712604
Number of sequences better than 0.0: 0