BLASTX 7.6.2
Query= UN28238 /QuerySize=718
(717 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 177 9e-045
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 162 2e-040
TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 158 3e-039
TAIR9_protein||AT4G25990.2 | Symbols: CIL | CIL | chr4:13191937-... 150 9e-037
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 89 2e-018
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 81 5e-016
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 80 8e-016
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 80 8e-016
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 77 7e-015
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 76 2e-014
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 75 4e-014
TAIR9_protein||AT5G57180.3 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 69 3e-012
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 61 7e-010
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 59 3e-009
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 58 5e-009
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 58 6e-009
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 57 1e-008
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 57 1e-008
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 55 4e-008
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 55 4e-008
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 177 bits (447), Expect = 9e-045
Identities = 96/155 (61%), Positives = 113/155 (72%), Gaps = 5/155 (3%)
Frame = +2
Query: 74 TVDLDRIQTTVTVVDEVKKSKKKKKKVAVVPLAKVSSKE--EETEERS---GGPMLKLEY 238
TVD ++ V+ K +KKKKKK V ++ + E+TEE S GP+LKL+Y
Sbjct: 282 TVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDY 341
Query: 239 DGVLEAWFDKATPFGEESEVTTGADVNARLAQIDLFGDSGVREASVLRYKEKRQTRLFYK 418
DGVLEAW DK +PF +E + + DVNARLAQIDLFGDSG+REASVLRYKEKR+TRLF K
Sbjct: 342 DGVLEAWSDKTSPFPDEIQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSK 401
Query: 419 KIRYQVRKLNADQRPRVKGRFVRRSCASPPSCQR* 523
KIRYQVRKLNADQRPR+KGRFVRR S PS QR*
Sbjct: 402 KIRYQVRKLNADQRPRMKGRFVRRPNESTPSGQR* 436
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 162 bits (409), Expect = 2e-040
Identities = 89/152 (58%), Positives = 106/152 (69%), Gaps = 8/152 (5%)
Frame = +2
Query: 56 DDARFHTVDLDRIQTTVTVVDEVKKSKKKKKKVAVVPLAKVSSKEEETE-----ERSGGP 220
DD + + VD +I+T VT + KK KKKKKK V P A S E T+ E+ P
Sbjct: 233 DDGQSNVVDSSKIKTIVTAEGD-KKKKKKKKKKKVAPAAAESKSSEVTDSNPKLEQRVSP 291
Query: 221 MLKLEYDGVLEAWFDKATPFGEE--SEVTTGADVNARLAQIDLFGDSGVREASVLRYKEK 394
+LKL+YDGVLEAW K +PF +E G D + RL +IDLFG+SG+REASVLRYKEK
Sbjct: 292 LLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLFGESGMREASVLRYKEK 351
Query: 395 RQTRLFYKKIRYQVRKLNADQRPRVKGRFVRR 490
R+ RLF KKIRYQVRKLNADQRPR+KGRFVRR
Sbjct: 352 RRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 383
>TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170294 FORWARD
Length = 425
Score = 158 bits (399), Expect = 3e-039
Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 5/138 (3%)
Frame = +2
Query: 74 TVDLDRIQTTVTVVDEVKKSKKKKKKVAVVPLAKVSSKE--EETEERS---GGPMLKLEY 238
TVD ++ V+ K +KKKKKK V ++ + E+TEE S GP+LKL+Y
Sbjct: 282 TVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDY 341
Query: 239 DGVLEAWFDKATPFGEESEVTTGADVNARLAQIDLFGDSGVREASVLRYKEKRQTRLFYK 418
DGVLEAW DK +PF +E + + DVNARLAQIDLFGDSG+REASVLRYKEKR+TRLF K
Sbjct: 342 DGVLEAWSDKTSPFPDEIQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSK 401
Query: 419 KIRYQVRKLNADQRPRVK 472
KIRYQVRKLNADQRPR+K
Sbjct: 402 KIRYQVRKLNADQRPRMK 419
>TAIR9_protein||AT4G25990.2 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 410
Score = 150 bits (378), Expect = 9e-037
Identities = 83/146 (56%), Positives = 100/146 (68%), Gaps = 8/146 (5%)
Frame = +2
Query: 56 DDARFHTVDLDRIQTTVTVVDEVKKSKKKKKKVAVVPLAKVSSKEEETE-----ERSGGP 220
DD + + VD +I+T VT + KK KKKKKK V P A S E T+ E+ P
Sbjct: 233 DDGQSNVVDSSKIKTIVTAEGD-KKKKKKKKKKKVAPAAAESKSSEVTDSNPKLEQRVSP 291
Query: 221 MLKLEYDGVLEAWFDKATPFGEE--SEVTTGADVNARLAQIDLFGDSGVREASVLRYKEK 394
+LKL+YDGVLEAW K +PF +E G D + RL +IDLFG+SG+REASVLRYKEK
Sbjct: 292 LLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLFGESGMREASVLRYKEK 351
Query: 395 RQTRLFYKKIRYQVRKLNADQRPRVK 472
R+ RLF KKIRYQVRKLNADQRPR+K
Sbjct: 352 RRNRLFSKKIRYQVRKLNADQRPRMK 377
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 89 bits (219), Expect = 2e-018
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +2
Query: 182 SKEEETEERSGGPMLKLEYDGVLEAWFDKATPFGEESEVTTGADVNARLAQIDLFGDSGV 361
+K + E++ G L L + V++AW D P ++ + + I+ +
Sbjct: 92 NKPTDYEDKDLGLKLNLNHQEVIDAWSDHQKPLWTDTSTLDNSVYRGEVPVIEEKRNMR- 150
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRR 490
REASVLRYKEKRQ+RLF KKIRYQVRKLNAD+RPR KGRFV+R
Sbjct: 151 REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 81 bits (199), Expect = 5e-016
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +2
Query: 347 GDSGVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRS 493
G G REA VLRYKEKR+TRLF KKIRY+VRKLNA+QRPR+KGRFV+R+
Sbjct: 340 GSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 80 bits (197), Expect = 8e-016
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +2
Query: 176 VSSKEEETEE-RSGGPMLKLEYDGVLEAWFDKATPFGEESEVTTGADVNARLAQIDLFGD 352
VS K EE E+ +L Y+ V+ AW + +P ++ ++ V + + + +
Sbjct: 218 VSEKTEEIEDCYENNARHRLNYENVIAAWDKQESPRDVKNNTSSFQLVPPGIEEKRVRSE 277
Query: 353 SGVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRSCA 499
REA V RY++KR+ RLF KKIRY+VRK+NAD+RPR+KGRFVRRS A
Sbjct: 278 ---REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLA 323
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 80 bits (197), Expect = 8e-016
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +2
Query: 176 VSSKEEETEE-RSGGPMLKLEYDGVLEAWFDKATPFGEESEVTTGADVNARLAQIDLFGD 352
VS K EE E+ +L Y+ V+ AW + +P ++ ++ V + + + +
Sbjct: 211 VSEKTEEIEDCYENNARHRLNYENVIAAWDKQESPRDVKNNTSSFQLVPPGIEEKRVRSE 270
Query: 353 SGVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRSCA 499
REA V RY++KR+ RLF KKIRY+VRK+NAD+RPR+KGRFVRRS A
Sbjct: 271 ---REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLA 316
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 77 bits (189), Expect = 7e-015
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +2
Query: 356 GVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRR 490
G REAS+LRYKEKRQ RLF K+IRYQVRKLNA++RPRVKGRFV+R
Sbjct: 292 GHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 76 bits (186), Expect = 2e-014
Identities = 37/50 (74%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
Frame = +2
Query: 344 FGDSGVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRS 493
FGD G REA V RY+EKR+TRLF KKIRY+VRKLNA++RPR+KGRFV+R+
Sbjct: 356 FGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 404
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 75 bits (183), Expect = 4e-014
Identities = 37/49 (75%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Frame = +2
Query: 347 GDSGVREASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRS 493
GD G REA V RY+EKR+TRLF KKIRY+VRKLNA++RPR+KGRFV+RS
Sbjct: 353 GDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400
>TAIR9_protein||AT5G57180.3 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23169523 FORWARD
Length = 377
Score = 69 bits (167), Expect = 3e-012
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = +2
Query: 74 TVDLDRIQTTVTVVDEVKKSKKKKKKVAVVPLAKVSSKE--EETEERS---GGPMLKLEY 238
TVD ++ V+ K +KKKKKK V ++ + E+TEE S GP+LKL+Y
Sbjct: 282 TVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDY 341
Query: 239 DGVLEAWFDKATPFGEESEVTTGADVNARLAQI 337
DGVLEAW DK +PF +E + + DVN L I
Sbjct: 342 DGVLEAWSDKTSPFPDEIQGSEAVDVNVCLTLI 374
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 61 bits (146), Expect = 7e-010
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +2
Query: 263 DKATPFGEESEVTTGADVNARLAQIDLFGDSGVREASVLRYKEKRQTRLFYKKIRYQVRK 442
D + P+G T+GAD + A + L S REA V+RY+EKR+ R F K IRY RK
Sbjct: 311 DVSYPYG--GPATSGADPGTQRA-VPL--TSAEREARVMRYREKRKNRKFEKTIRYASRK 365
Query: 443 LNADQRPRVKGRFVRRS 493
A+ RPR+KGRF +R+
Sbjct: 366 AYAEMRPRIKGRFAKRT 382
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 59 bits (140), Expect = 3e-009
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 275 PFGEESEVTTGADVNARLAQIDLFGDSGVREASVLRYKEKRQTRLFYKKIRYQVRKLNAD 454
P ES T N + L REA VLRY+EKR+ R F K IRY RK A+
Sbjct: 202 PLVPESGGVTAEMTNTETPAVQL--SPAEREARVLRYREKRKNRKFEKTIRYASRKAYAE 259
Query: 455 QRPRVKGRFVRRS 493
RPR+KGRF +R+
Sbjct: 260 MRPRIKGRFAKRT 272
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 58 bits (139), Expect = 5e-009
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRSCAS 502
REA++ ++++KR+ R F KK+RYQ RK A+QRPRV+G+FVR++ A+
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAA 715
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 58 bits (138), Expect = 6e-009
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRRS 493
REA VLRY+EKR+ R F K IRY RK A+ RPR+KGRF +R+
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 328
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 57 bits (135), Expect = 1e-008
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRR 490
REA VLRY+EK++TR F K IRY RK A+ RPR+KGRF +R
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 57 bits (135), Expect = 1e-008
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVRR 490
REA VLRY+EKR+TR F K IRY RK A+ RPRV GRF +R
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 55 bits (131), Expect = 4e-008
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVR 487
REA++++++ KR+ R F KK+RYQ RK A+QRPRVKG+FVR
Sbjct: 300 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 341
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 55 bits (131), Expect = 4e-008
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = +2
Query: 362 REASVLRYKEKRQTRLFYKKIRYQVRKLNADQRPRVKGRFVR 487
REA++++++ KR+ R F KK+RYQ RK A+QRPRVKG+FVR
Sbjct: 132 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,712,254,296
Number of Sequences: 33410
Number of Extensions: 14712254296
Number of Successful Extensions: 477126131
Number of sequences better than 0.0: 0
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