BLASTX 7.6.2
Query= UN28263 /QuerySize=1154
(1153 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15238374|ref|NP_196112.1| vacuolar protein sorting-associated... 117 3e-024
gi|297810583|ref|XP_002873175.1| vacuolar protein sorting 36 fam... 117 3e-024
gi|110737344|dbj|BAF00617.1| hypothetical protein [Arabidopsis t... 84 5e-014
>gi|15238374|ref|NP_196112.1| vacuolar protein sorting-associated protein 36
[Arabidopsis thaliana]
Length = 440
Score = 117 bits (293), Expect = 3e-024
Identities = 70/100 (70%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = -1
Query: 625 GYLRKEQEQWESTDKSLQDAFQ--NALMSKG*GDGEFSGKMGQKLLSAPSSQNGSRDDEE 452
G LRKEQEQWESTDKSLQDAFQ NALMSK + KM QKLLSAPSSQNGS DDEE
Sbjct: 178 GILRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGSTDDEE 237
Query: 451 MGSKEEMQQPTVDVVECWYYLTSVKGSAGALYHQELSRQV 332
MGSKEEMQQ + V K SAGALYHQELSRQ+
Sbjct: 238 MGSKEEMQQWMLSV---GIISPVTKESAGALYHQELSRQL 274
Score = 84 bits (205), Expect = 5e-014
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Frame = -2
Query: 846 KKPVNSMFQSPRIRFQADRGSNGRHHRFQGKR*LVIFDGFLKKLWECWRGRAWEKEDEKS 667
KK + SMF SPRIRFQAD GS F+GK FDGFL KLWECWRGRAWE E+EKS
Sbjct: 93 KKSIKSMFHSPRIRFQADPGSIVVTIVFRGKG---DFDGFLSKLWECWRGRAWE-EEEKS 148
Query: 666 ESESGLYGNSGLGRDI*GKSKNSGRVQI 583
ESE+ G+ + + + G N G V++
Sbjct: 149 ESETSKSGSGTVAQGLYG---NDGTVRM 173
Score = 78 bits (191), Expect = 2e-012
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = -1
Query: 1054 MATSGRPILRRNEVECFLLSSVDRDSEDSPP*GPETLS-------*PLIWIPSSPVKP*T 896
+ TSGRP+LRRNEVECFLLSS+D DSED PP S LIWIPS + +
Sbjct: 19 VTTSGRPVLRRNEVECFLLSSIDIDSEDDPPRFTALRSGNLILTTHRLIWIPSQSNE--S 76
Query: 895 LPSSLPLSSITHIFSFKET 839
+PSS+PLS++THI+S K++
Sbjct: 77 VPSSIPLSAVTHIYSHKKS 95
>gi|297810583|ref|XP_002873175.1| vacuolar protein sorting 36 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 436
Score = 117 bits (293), Expect = 3e-024
Identities = 70/100 (70%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = -1
Query: 625 GYLRKEQEQWESTDKSLQDAFQ--NALMSKG*GDGEFSGKMGQKLLSAPSSQNGSRDDEE 452
G LRKEQEQWESTDKSLQDAFQ NALMSK + KM QKLLSAPSSQNGS DDEE
Sbjct: 178 GILRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGSTDDEE 237
Query: 451 MGSKEEMQQPTVDVVECWYYLTSVKGSAGALYHQELSRQV 332
MGSKEEMQQ + V K SAGALYHQELSRQ+
Sbjct: 238 MGSKEEMQQWMLSV---GIISPVTKESAGALYHQELSRQL 274
Score = 78 bits (191), Expect = 2e-012
Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Frame = -2
Query: 846 KKPVNSMFQSPRIRFQADRGSNGRHHRFQGKR*LVIFDGFLKKLWECWRGRAWEKEDEKS 667
KK + SMF SPRIRFQA+ GS F+GK FD FL KLWECWRGRAWE E+EKS
Sbjct: 93 KKSIKSMFHSPRIRFQANPGSIVVTIVFRGKG---DFDEFLTKLWECWRGRAWE-EEEKS 148
Query: 666 ESESGLYGNSGLGRDI*GKSKNSGRVQI 583
ESE+ G+ + + + G N G V++
Sbjct: 149 ESETSRSGSGTVAQGLYG---NDGTVRM 173
Score = 77 bits (187), Expect = 6e-012
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 9/79 (11%)
Frame = -1
Query: 1054 MATSGRPILRRNEVECFLLSSVDRDSEDSPP*GPETLS-------*PLIWIPSSPVKP*T 896
+ TSGRP+LRRNEVECFLLSSVD DSED PP S LIWIPS
Sbjct: 19 VTTSGRPVLRRNEVECFLLSSVDIDSEDDPPRFTALRSGNLILTTHRLIWIPSQ--SNGA 76
Query: 895 LPSSLPLSSITHIFSFKET 839
+PSS+PL+++THIFS K++
Sbjct: 77 VPSSVPLAAVTHIFSHKKS 95
>gi|110737344|dbj|BAF00617.1| hypothetical protein [Arabidopsis thaliana]
Length = 231
Score = 84 bits (205), Expect = 5e-014
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Frame = -2
Query: 846 KKPVNSMFQSPRIRFQADRGSNGRHHRFQGKR*LVIFDGFLKKLWECWRGRAWEKEDEKS 667
KK + SMF SPRIRFQAD GS F+GK FDGFL KLWECWRGRAWE E+EKS
Sbjct: 93 KKSIKSMFHSPRIRFQADPGSIVVTIVFRGKG---DFDGFLSKLWECWRGRAWE-EEEKS 148
Query: 666 ESESGLYGNSGLGRDI*GKSKNSGRVQI 583
ESE+ G+ + + + G N G V++
Sbjct: 149 ESETSKSGSGTVAQGLYG---NDGTVRM 173
Score = 78 bits (191), Expect = 2e-012
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = -1
Query: 1054 MATSGRPILRRNEVECFLLSSVDRDSEDSPP*GPETLS-------*PLIWIPSSPVKP*T 896
+ TSGRP+LRRNEVECFLLSS+D DSED PP S LIWIPS + +
Sbjct: 19 VTTSGRPVLRRNEVECFLLSSIDIDSEDDPPRFTALRSGNLILTTHRLIWIPSQSNE--S 76
Query: 895 LPSSLPLSSITHIFSFKET 839
+PSS+PLS++THI+S K++
Sbjct: 77 VPSSIPLSAVTHIYSHKKS 95
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,347,872,817,511
Number of Sequences: 15229318
Number of Extensions: 3347872817511
Number of Successful Extensions: 807712604
Number of sequences better than 0.0: 0
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