BLASTX 7.6.2
Query= UN28263 /QuerySize=1154
(1153 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G04920.1 | Symbols: | vacuolar protein sortin... 117 1e-026
TAIR9_protein||AT5G04890.1 | Symbols: RTM2 | RTM2 (RESTRICTED TE... 52 5e-007
>TAIR9_protein||AT5G04920.1 | Symbols: | vacuolar protein sorting 36 family
protein / VPS36 family protein | chr5:1439172-1441545 REVERSE
Length = 441
Score = 117 bits (293), Expect = 1e-026
Identities = 70/100 (70%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = -1
Query: 625 GYLRKEQEQWESTDKSLQDAFQ--NALMSKG*GDGEFSGKMGQKLLSAPSSQNGSRDDEE 452
G LRKEQEQWESTDKSLQDAFQ NALMSK + KM QKLLSAPSSQNGS DDEE
Sbjct: 178 GILRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGSTDDEE 237
Query: 451 MGSKEEMQQPTVDVVECWYYLTSVKGSAGALYHQELSRQV 332
MGSKEEMQQ + V K SAGALYHQELSRQ+
Sbjct: 238 MGSKEEMQQWMLSV---GIISPVTKESAGALYHQELSRQL 274
Score = 90 bits (222), Expect = 2e-018
Identities = 64/129 (49%), Positives = 74/129 (57%), Gaps = 21/129 (16%)
Frame = -2
Query: 846 KKPVNSMFQSPRIRFQADRGSNGRHHRFQGKR*LVIFDGFLKKLWECWRGRAWEKEDEKS 667
KK + SMF SPRIRFQAD GS F+GK FDGFL KLWECWRGRAWE E+EKS
Sbjct: 93 KKSIKSMFHSPRIRFQADPGSIVVTIVFRGKG---DFDGFLSKLWECWRGRAWE-EEEKS 148
Query: 666 ESES----------GLYGNSGLGR-----DI*GKSKNSGRVQIRACRMLFRML--L*VRA 538
ESE+ GLYGN G R I K + ++ + F+ L L +A
Sbjct: 149 ESETSKSGSGTVAQGLYGNDGTVRMVGLAGILRKEQEQWESTDKSLQDAFQDLNALMSKA 208
Query: 537 KEMVSLAGK 511
KEMVSLA K
Sbjct: 209 KEMVSLAEK 217
Score = 78 bits (191), Expect = 8e-015
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = -1
Query: 1054 MATSGRPILRRNEVECFLLSSVDRDSEDSPP*GPETLS-------*PLIWIPSSPVKP*T 896
+ TSGRP+LRRNEVECFLLSS+D DSED PP S LIWIPS + +
Sbjct: 19 VTTSGRPVLRRNEVECFLLSSIDIDSEDDPPRFTALRSGNLILTTHRLIWIPSQSNE--S 76
Query: 895 LPSSLPLSSITHIFSFKET 839
+PSS+PLS++THI+S K++
Sbjct: 77 VPSSIPLSAVTHIYSHKKS 95
>TAIR9_protein||AT5G04890.1 | Symbols: RTM2 | RTM2 (RESTRICTED TEV MOVEMENT 2) |
chr5:1427217-1428390 FORWARD
Length = 367
Score = 52 bits (124), Expect = 5e-007
Identities = 29/39 (74%), Gaps = 5/39 (12%)
Frame = +3
Query: 3 FALGVYVSYTFCSSSSPSSSSSSTSTSPSSSSPSTTPE* 119
FALG YVSYTFCSSSS SSSS SPSSSS ST PE*
Sbjct: 334 FALGAYVSYTFCSSSSSSSSS-----SPSSSSSSTKPE* 367
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,712,254,296
Number of Sequences: 33410
Number of Extensions: 14712254296
Number of Successful Extensions: 477126131
Number of sequences better than 0.0: 0
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