BLASTX 7.6.2
Query= UN28613 /QuerySize=1169
(1168 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27840.1 | Symbols: | FUNCTIONS IN: molecular... 357 1e-098
TAIR9_protein||AT5G52990.1 | Symbols: | vesicle-associated memb... 191 7e-049
>TAIR9_protein||AT4G27840.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: transport; LOCATED IN: endomembrane system;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST
Arabidopsis thaliana protein match is: vesicle-associated membrane
protein-related (TAIR:AT5G52990.1); Has 165 Blast hits to 165 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants
- 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr4:13865268-13866050 REVERSE
Length = 261
Score = 357 bits (914), Expect = 1e-098
Identities = 192/270 (71%), Positives = 214/270 (79%), Gaps = 26/270 (9%)
Frame = +1
Query: 136 MITNPRLLFYSCIAKGTVILAEFSSKDEPEIEALALRCIESVPPHHSMISHTVRKRTYAL 315
M +N R+LFYSCIAKGTVILAEF+SK+EP IE LALRCIE+VPPHHSMISHTV KRTYAL
Sbjct: 1 MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60
Query: 316 IIDRSFTYLAILDEAVTKTESLWLFNRLKSAVEALVSDGS---ALDNPTKHCLQSKLDHV 486
IID F+Y AILDE V K+ES+WLFNRLKSA E+L+ DGS +LDNPT+HCLQSKLD V
Sbjct: 61 IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120
Query: 487 FAEIATGGGNNNNKDLEPELGSVGS-PREIK--NPSLDSSS--KERSLKPLLAKPLMVLK 651
FAEIA GG N+NKDLE E GS S REIK N SLDSS K +L PLL KPL VL
Sbjct: 121 FAEIAAIGG-NHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRKGGALMPLLGKPLRVL- 178
Query: 652 KNKKRLRTEA---------KMDVGGGGGGVISSRGLPRNGLIHDHHHRQKAEQIWKKHVW 804
KNKKRL+TEA KMD+GGGG GV RNGLIHDHHHRQKA+QIW+KHVW
Sbjct: 179 KNKKRLQTEAKSEGHWNEKKMDLGGGGKGV-------RNGLIHDHHHRQKAKQIWRKHVW 231
Query: 805 VVLMFDVCICVVLFGIWLWVCQGFQCIQG* 894
+VLMFD+CIC+VLFGIWLW+CQGFQCI G*
Sbjct: 232 IVLMFDLCICLVLFGIWLWICQGFQCIDG* 261
>TAIR9_protein||AT5G52990.1 | Symbols: | vesicle-associated membrane
protein-related | chr5:21484188-21485006 FORWARD
Length = 273
Score = 191 bits (485), Expect = 7e-049
Identities = 112/194 (57%), Positives = 132/194 (68%), Gaps = 18/194 (9%)
Frame = +1
Query: 136 MITNPRLLFYSCIAKGTVILAEFSSKDEPEIEALALRCIESVPPHHSMISHTVRKRTYAL 315
MI+NP LL Y+CIAKGTV+LAEF S+ EP IEA+ALRCIE+ PPHHSM SHTV K+TY
Sbjct: 1 MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60
Query: 316 II-DRSFTYLAILDEAVTKTESLWLFNRLKSAVEALVSDGSA----LDNPTKHCLQSKLD 480
I D SF Y +I DE++ K ES W+ NRL+SA+E L+ DG + L NP HCLQ KLD
Sbjct: 61 AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVETLINPVSHCLQLKLD 120
Query: 481 HVFAEIATGGGNNNNKDLE-PELGSVGSP----REIKNPSLDSSSKER-SLKPLLAKPLM 642
VFAEI DLE ++ VGSP RE +NPS+DSS R +L PLL KPL
Sbjct: 121 PVFAEIV------GVVDLELLDMDLVGSPRSVARESRNPSIDSSKGRRAALMPLLGKPLK 174
Query: 643 VLKKNKKRLRTEAK 684
LKK KKRL EAK
Sbjct: 175 ALKK-KKRLHNEAK 187
Score = 117 bits (292), Expect = 2e-026
Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 673 TEAKMDVGGGGGGVISSRGLPRNGLIHDHHHRQKAEQIWKKHVWVVLMFDVCICVVLFGI 852
+E +D+ G G + + L RNGL+ DHHHRQKA+QIWKKHVWVVLMFD CIC VLFGI
Sbjct: 201 SEKNVDLCGNGNNGVLRKEL-RNGLLSDHHHRQKAKQIWKKHVWVVLMFDFCICAVLFGI 259
Query: 853 WLWVCQGFQCIQG* 894
WLW+C+GFQCIQG*
Sbjct: 260 WLWICEGFQCIQG* 273
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,884,282,999
Number of Sequences: 33410
Number of Extensions: 14884282999
Number of Successful Extensions: 477299960
Number of sequences better than 0.0: 0
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