Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN28631


BLASTX 7.6.2

Query= UN28631 /QuerySize=1287
        (1286 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G08950.1 | Symbols:  | electron transport SCO1...    581   3e-166
TAIR9_protein||AT4G39740.1 | Symbols:  | electron transport SCO1...    164   1e-040

>TAIR9_protein||AT3G08950.1 | Symbols:  | electron transport SCO1/SenC family
        protein | chr3:2727285-2729289 FORWARD

          Length = 335

 Score =  581 bits (1497), Expect = 3e-166
 Identities = 292/335 (87%), Positives = 308/335 (91%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1240 MASALCRTASRLRPVQIFRRIRASSDLLSSSSPPPPCISD---HGDFSLPRSFFSLSGGI 1070
            MASALCRTASRLR VQ+FRRIR SSDLLS+SSP P CISD   HGDFSLPRSFFSL+ GI
Sbjct:    1 MASALCRTASRLRSVQLFRRIRVSSDLLSASSPSPACISDALRHGDFSLPRSFFSLNCGI 60

Query: 1069 ERLEMDRRCLMSTSASGTASKPSSGDTETKSSGENEESGG---SDGGSDQKSDRASGKNA 899
            E L+MD+RCL+STSAS T SK  SG  ETKSS +NE+SGG   SDGGSD K++RASGK+ 
Sbjct:   61 EMLKMDQRCLLSTSASDTTSKHDSGKPETKSSEKNEKSGGSESSDGGSDHKNERASGKDV 120

Query:  898 RGAPVSWMSFFLLFATGAGLVYYYDREKKRHIEDINTNSKAVKEGPSAGKAAIGGPFSLI 719
            RG PVSWMSFFLLFATGAGLVYYYD +KKRHIEDIN NS AVKEGPSAGKAAIGGPFSLI
Sbjct:  121 RGGPVSWMSFFLLFATGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLI 180

Query:  718 RDDGKRITEKDLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKEKSGVDVVPVFISVD 539
            RDDGKR+TEK+LMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKE SGVDVVPVFISVD
Sbjct:  181 RDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVD 240

Query:  538 PERDTVQQVHEYVKEFHPKLIGLTGTPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMY 359
            PERDTVQQVHEYVKEFHPKLIGLTG+PEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMY
Sbjct:  241 PERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMY 300

Query:  358 LMSPEMNFVKFYGKNHDVDSLTDGVVKELRQYRK* 254
            LMSPEMNFVKFYGKNHDVDSLTDGVVKE+RQYRK*
Sbjct:  301 LMSPEMNFVKFYGKNHDVDSLTDGVVKEIRQYRK* 335

>TAIR9_protein||AT4G39740.1 | Symbols:  | electron transport SCO1/SenC family
        protein | chr4:18435586-18437095 REVERSE

          Length = 277

 Score =  164 bits (414), Expect = 1e-040
 Identities = 83/230 (36%), Positives = 135/230 (58%), Gaps = 17/230 (7%)
 Frame = -2

Query: 943 GGSDQKSDRASGKNARGAPVSWMSFFLLFATGAGLVYYYDREKKRHIEDINTN------S 782
           GG  Q   R+  + A  A        L FA   G ++Y D  +       ++N      S
Sbjct:  53 GGGTQAPSRSRARYAVPA------ILLGFAGFVGFLHYNDERRAVPRGQASSNSGCGCGS 106

Query: 781 KAVKEGPSAGKAAIGGPFSLIRDDGKRITEKDLMGKWTILYFGFTHCPDICPDELIKLAA 602
               +GP      IGGPF+L+  + K +TE D  GKW +LYFG++  PD+ P++L  ++ 
Sbjct: 107 NTTVKGP-----IIGGPFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSK 161

Query: 601 AIDKIKEKSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGTPEEIKSVARSYRV 422
           A+DK++ K    ++PVF+++DP+RDT   +H Y+KEF  +++GLTGT   ++ +A+ YRV
Sbjct: 162 AVDKLESKHNEKILPVFVTLDPQRDTPSHLHAYLKEFDSRILGLTGTASAMRQMAQEYRV 221

Query: 421 YYMKTEEEDSDYLVDHSIVMYLMSPEMNFVKFYGKNHDVDSLTDGVVKEL 272
           Y+ K +E+  DYLVD S  MYL++P+M  V+ +G  ++ D L+  ++KE+
Sbjct: 222 YFKKVQEDGEDYLVDTSHNMYLINPKMEIVRCFGVEYNPDELSQELLKEV 271

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,926,939,873
Number of Sequences: 33410
Number of Extensions: 14926939873
Number of Successful Extensions: 477308386
Number of sequences better than 0.0: 0