Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN28635


BLASTX 7.6.2

Query= UN28635 /QuerySize=636
        (635 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G01740.1 | Symbols:  | FUNCTIONS IN: molecular...    159   2e-039
TAIR9_protein||AT5G14290.1 | Symbols:  | FUNCTIONS IN: molecular...    130   1e-030

>TAIR9_protein||AT3G01740.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
        plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
        DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870);
        BEST Arabidopsis thaliana protein match is: unknown protein
        (TAIR:AT5G14290.1); Has 117 Blast hits to 117 proteins in 58 species:
        Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 22; Plants - 27;
        Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
        chr3:268118-268498 FORWARD

          Length = 127

 Score =  159 bits (400), Expect = 2e-039
 Identities = 94/128 (73%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
 Frame = +2

Query: 107 RIQELMATGSKNVVRRTF-AAAGKAKKGG-GGGGGDGPKGSSLTLRKEIKSTTVVGANTL 280
           RI  +  + SK+VVRRTF AAA KAKKGG GGG  D PKGSSLT  KEIKSTTVVGANTL
Sbjct:   3 RIGLIRGSSSKDVVRRTFAAAASKAKKGGKGGGASDAPKGSSLT--KEIKSTTVVGANTL 60

Query: 281 KDGCDPKISTDSSDYPDWLCRLLHNRPALSELSRKNVEN---DDLKRFVKLNTRVHIKEN 451
           KDG DPKI  D SDYPDWL  LL  RPALSEL RKNVE    DDLKRFVKL+TR  IKEN
Sbjct:  61 KDGSDPKILPD-SDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRGKIKEN 119

Query: 452 NSIKANN* 475
           NSIKA N*
Sbjct: 120 NSIKAKN* 127

>TAIR9_protein||AT5G14290.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosomal
        protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis
        thaliana protein match is: unknown protein (TAIR:AT3G01740.1); Has 31
        Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0;
        Metazoa - 4; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
        (source: NCBI BLink). | chr5:4612212-4612610 REVERSE

          Length = 133

 Score =  130 bits (325), Expect = 1e-030
 Identities = 81/123 (65%), Positives = 91/123 (73%), Gaps = 12/123 (9%)
 Frame = +2

Query: 134 SKNVVR----RTFA-AAGKAKK-GGGGGGGDGPKGSSLTLRKEIKSTTVVGANTLKDGCD 295
           SK+V+R    RTFA AAGKAKK G G GG D PK S+L+  KEIKS+ VV ANTLKDG D
Sbjct:  14 SKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLS--KEIKSSMVVSANTLKDGLD 71

Query: 296 PKISTDSSDYPDWLCRLLHNRPALSELSRKNVEN---DDLKRFVKLNTRVHIKENNSIKA 466
           PKI   +SD+PD+L  LL  RPALSEL RKNVE    DDLKRFVKL+TR  IKEN+SIKA
Sbjct:  72 PKI-LPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTRARIKENHSIKA 130

Query: 467 NN* 475
            N*
Sbjct: 131 KN* 133

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,926,939,873
Number of Sequences: 33410
Number of Extensions: 14926939873
Number of Successful Extensions: 477308386
Number of sequences better than 0.0: 0