BLASTX 7.6.2
Query= UN28635 /QuerySize=636
(635 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01740.1 | Symbols: | FUNCTIONS IN: molecular... 159 2e-039
TAIR9_protein||AT5G14290.1 | Symbols: | FUNCTIONS IN: molecular... 130 1e-030
>TAIR9_protein||AT3G01740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14290.1); Has 117 Blast hits to 117 proteins in 58 species:
Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 22; Plants - 27;
Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
chr3:268118-268498 FORWARD
Length = 127
Score = 159 bits (400), Expect = 2e-039
Identities = 94/128 (73%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Frame = +2
Query: 107 RIQELMATGSKNVVRRTF-AAAGKAKKGG-GGGGGDGPKGSSLTLRKEIKSTTVVGANTL 280
RI + + SK+VVRRTF AAA KAKKGG GGG D PKGSSLT KEIKSTTVVGANTL
Sbjct: 3 RIGLIRGSSSKDVVRRTFAAAASKAKKGGKGGGASDAPKGSSLT--KEIKSTTVVGANTL 60
Query: 281 KDGCDPKISTDSSDYPDWLCRLLHNRPALSELSRKNVEN---DDLKRFVKLNTRVHIKEN 451
KDG DPKI D SDYPDWL LL RPALSEL RKNVE DDLKRFVKL+TR IKEN
Sbjct: 61 KDGSDPKILPD-SDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRGKIKEN 119
Query: 452 NSIKANN* 475
NSIKA N*
Sbjct: 120 NSIKAKN* 127
>TAIR9_protein||AT5G14290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT3G01740.1); Has 31
Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:4612212-4612610 REVERSE
Length = 133
Score = 130 bits (325), Expect = 1e-030
Identities = 81/123 (65%), Positives = 91/123 (73%), Gaps = 12/123 (9%)
Frame = +2
Query: 134 SKNVVR----RTFA-AAGKAKK-GGGGGGGDGPKGSSLTLRKEIKSTTVVGANTLKDGCD 295
SK+V+R RTFA AAGKAKK G G GG D PK S+L+ KEIKS+ VV ANTLKDG D
Sbjct: 14 SKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLS--KEIKSSMVVSANTLKDGLD 71
Query: 296 PKISTDSSDYPDWLCRLLHNRPALSELSRKNVEN---DDLKRFVKLNTRVHIKENNSIKA 466
PKI +SD+PD+L LL RPALSEL RKNVE DDLKRFVKL+TR IKEN+SIKA
Sbjct: 72 PKI-LPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTRARIKENHSIKA 130
Query: 467 NN* 475
N*
Sbjct: 131 KN* 133
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,926,939,873
Number of Sequences: 33410
Number of Extensions: 14926939873
Number of Successful Extensions: 477308386
Number of sequences better than 0.0: 0
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