BLASTX 7.6.2
Query= UN28679 /QuerySize=1073
(1072 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G80150.1 | Symbols: | pentatricopeptide (PPR)... 362 3e-100
TAIR9_protein||AT1G62670.1 | Symbols: | pentatricopeptide (PPR)... 107 2e-023
TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological... 105 6e-023
TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)... 100 2e-021
TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)... 100 2e-021
TAIR9_protein||AT1G63330.1 | Symbols: | pentatricopeptide (PPR)... 99 5e-021
TAIR9_protein||AT1G55890.1 | Symbols: | pentatricopeptide (PPR)... 97 1e-020
TAIR9_protein||AT3G22470.1 | Symbols: | pentatricopeptide (PPR)... 97 1e-020
TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)... 97 2e-020
TAIR9_protein||AT1G12775.1 | Symbols: | LOCATED IN: mitochondri... 96 3e-020
TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-contain... 95 6e-020
TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast... 94 1e-019
TAIR9_protein||AT1G12300.1 | Symbols: | pentatricopeptide (PPR)... 94 2e-019
TAIR9_protein||AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-gl... 92 4e-019
TAIR9_protein||AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-gl... 92 4e-019
TAIR9_protein||AT1G64580.1 | Symbols: | pentatricopeptide (PPR)... 91 9e-019
>TAIR9_protein||AT1G80150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:30148738-30149931 FORWARD
Length = 398
Score = 362 bits (928), Expect = 3e-100
Identities = 172/204 (84%), Positives = 187/204 (91%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G LD A +AM+EMEKSGL PDVVTYTTLISA YKH+R V+GNGLWN MVLKGC+PNLTTF
Sbjct: 191 GILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTF 250
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
NVRIQFLVNR RAWDA+DLL+LMPKLQ+EPD++TYNMVIKGFF+A FP+MAERVYTAMHG
Sbjct: 251 NVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHG 310
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
KGYKPN+KIYQTMIHYLCKAG FDL YTMCKDCMRKKWYPNLDTV +LL GLVKKGQLDQ
Sbjct: 311 KGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQ 370
Query: 541 AKLIMGLVHKRVPPFSSKQLLPLK 612
AK IM LVH+RVPPF SKQLL LK
Sbjct: 371 AKSIMELVHRRVPPFRSKQLLSLK 394
>TAIR9_protein||AT1G62670.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23204773-23206665 REVERSE
Length = 631
Score = 107 bits (266), Expect = 2e-023
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G L +A EM K + P +VTY++LI+ F HDR ++ MV K C P++ T+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N I+ R + ++ M + + + VTYN++I+G F AG +MA+ ++ M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
G PN+ Y T++ LCK GK + + + R K P + T ++++G+ K G+++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 541 A-KLIMGLVHKRVPP 582
L L K V P
Sbjct: 520 GWDLFCNLSLKGVKP 534
Score = 95 bits (234), Expect = 8e-020
Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
+D A KEME G++P+VVTY++LIS + R+ + L + M+ + P++ TF+
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I V G+ +A L M K ++P VTY+ +I GF + + A++++ M K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQA- 543
P+V Y T+I CK + + G + ++ ++ N T +L+ GL + G D A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 544 KLIMGLVHKRVPP 582
++ +V VPP
Sbjct: 452 EIFKEMVSDGVPP 464
>TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1);
Has 29147 Blast hits to 6292 proteins in 192 species: Archae - 8;
Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants - 25291; Viruses -
0; Other Eukaryotes - 1710 (source: NCBI BLink). |
chr1:23306534-23308423 FORWARD
Length = 630
Score = 105 bits (261), Expect = 6e-023
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G L +A EM K + PD+ TY++LI+ F HDR ++ M+ K C PN+ T+
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N I+ R + +L M + + + VTYN +I+G F AG +MA++++ M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
G P++ Y ++ LCK GK + + + + K P++ T ++++G+ K G+++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 541 A-KLIMGLVHKRVPP 582
L L K V P
Sbjct: 519 GWDLFCSLSLKGVKP 533
Score = 96 bits (237), Expect = 3e-020
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Frame = +1
Query: 34 EMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNVRIQFLVNRG 213
EM+ G++P+VVTY +LI + R+ + L + M+ + PN+ TF+ I V G
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 214 RAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKGYKPNVKIYQ 393
+ +A L M K ++PD TY+ +I GF + + A+ ++ M K PNV Y
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 394 TMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQA-KLIMGLVHK 570
T+I CKA + + G + ++ ++ N T L+ GL + G D A K+ +V
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 571 RVPP 582
VPP
Sbjct: 460 GVPP 463
Score = 91 bits (224), Expect = 1e-018
Identities = 56/185 (30%), Positives = 93/185 (50%)
Frame = +1
Query: 16 ASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNVRIQ 195
AS + +M + + P+VVT++ LI AF K + V L++ M+ + P++ T++ I
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 196 FLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKGYKP 375
R +A + LM P+ VTYN +IKGF A E ++ M +G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 376 NVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAKLIM 555
N Y T+I L +AG D+ + K + P++ T +LLDGL K G+L++A ++
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 556 GLVHK 570
+ K
Sbjct: 489 EYLQK 493
>TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23419399-23421288 FORWARD
Length = 630
Score = 100 bits (248), Expect = 2e-021
Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Frame = +1
Query: 34 EMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNVRIQFLVNRG 213
EME G++P+VVTY +LI+ + R+ + L + M+ K PN+ TFN I G
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 214 RAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKGYKPNVKIYQ 393
+ +A L M + ++PD +TYN++I GF + + A++++ M K PN++ Y
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 394 TMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAKLIM-GLVHK 570
T+I+ CK + + G + ++ ++ N T ++ G + G D A+++ +V
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 571 RVP 579
RVP
Sbjct: 463 RVP 465
>TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23177294-23179198 REVERSE
Length = 635
Score = 100 bits (247), Expect = 2e-021
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
+D A KEME G++P+VVTY++LIS + R+ + L + M+ K PNL TFN
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I V G+ +A L M K ++PD TYN ++ GF + + A++++ M K
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQA- 543
P+V Y T+I CK+ + + G + ++ + + T L+ GL G D A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 544 KLIMGLVHKRVPP 582
K+ +V VPP
Sbjct: 456 KVFKQMVSDGVPP 468
>TAIR9_protein||AT1G63330.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23489628-23491519 FORWARD
Length = 559
Score = 99 bits (244), Expect = 5e-021
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
+D A KEME G++P+VVTY++LIS + R+ + L + M+ K PNL TFN
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I V G+ +A L M K ++PD TYN +I GF + + A++++ M K
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQA- 543
P++ Y T+I CK+ + + G + ++ + + T L+ GL G D A
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 544 KLIMGLVHKRVPP 582
K+ +V VPP
Sbjct: 380 KVFKQMVSDGVPP 392
>TAIR9_protein||AT1G55890.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:20901364-20902560 FORWARD
Length = 399
Score = 97 bits (241), Expect = 1e-020
Identities = 52/183 (28%), Positives = 99/183 (54%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
L +A + E+E GLKPD+VT+ TL+ + Y ++ +G +W +MV K ++ T+N
Sbjct: 196 LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNA 255
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
R+ L N ++ + +L + ++PD ++N +I+G G + AE Y + G
Sbjct: 256 RLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAK 546
Y+P+ + ++ +CKAG F+ + K+ K++ T+ L+D LVK + ++A+
Sbjct: 316 YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAE 375
Query: 547 LIM 555
I+
Sbjct: 376 EIV 378
>TAIR9_protein||AT3G22470.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:7966066-7967925 REVERSE
Length = 620
Score = 97 bits (241), Expect = 1e-020
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G D + ++EM + PDVVT++ LI F K + + L+N M+ +G P+ T+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N I +A+ + LM EPD VTY+++I + A + R++ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
KG PN Y T++ C++GK + + ++ + + P++ T G+LLDGL G+L++
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 541 AKLIMGLVHKRVPPFSSKQLLPLKVHFVTVLHG 639
A I + K S+ L + ++ + ++HG
Sbjct: 474 ALEIFEKMQK------SRMTLGIGIYNI-IIHG 499
>TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23388884-23390728 REVERSE
Length = 615
Score = 97 bits (239), Expect = 2e-020
Identities = 56/182 (30%), Positives = 93/182 (51%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
+D A EM+ G++PDV TY++LIS + R+ + L + M+ + PN+ TFN
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I G+ +A L M + ++P+ VTYN +I GF + + A++++T M K
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAK 546
P+V Y T+I+ CKA K G + +D R+ N T L+ G + D A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 547 LI 552
++
Sbjct: 436 MV 437
>TAIR9_protein||AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED
IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G12300.1);
Has 27792 Blast hits to 6269 proteins in 197 species: Archae - 2;
Bacteria - 23; Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). | chr1:4353906-4355840
FORWARD
Length = 645
Score = 96 bits (237), Expect = 3e-020
Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G D + +++M K + P+VVT++ LI +F K + + L M+ +G PN T+
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N I R +A ++ LM +PD +T+N++I G+ A + ++ M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
+G N Y T++ C++GK ++ + ++ + ++ P++ + +LLDGL G+L++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 541 AKLIMGLVHKRVPPFSSKQLLPLKVHFVTVLHG 639
A I G + K SK L + ++ + ++HG
Sbjct: 492 ALEIFGKIEK------SKMELDIGIYMI-IIHG 517
>TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 829
Score = 95 bits (235), Expect = 6e-020
Identities = 49/181 (27%), Positives = 95/181 (52%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G + +L +K+M + P+V+T+ L+ F K + N L+ M+ +G PN+ T+
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N + + R +A+++L LM + + PD VT+ +IKG+ + + +V+ +
Sbjct: 327 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 386
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
+G N Y ++ C++GK L + ++ + P++ T G+LLDGL G+L++
Sbjct: 387 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446
Query: 541 A 543
A
Sbjct: 447 A 447
>TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to
6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845;
Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421
(source: NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 549
Score = 94 bits (232), Expect = 1e-019
Identities = 49/172 (28%), Positives = 92/172 (53%)
Frame = +1
Query: 31 KEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNVRIQFLVNR 210
KE+E+ G++P+VVTYT L++ R+ L + M+ K PN+ T++ + V
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 211 GRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKGYKPNVKIY 390
G+ +A +L M ++ ++PD VTY+ +I G + + A +++ M KG +V Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 391 QTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAK 546
T+I+ CKA + + G + ++ ++ N T L+ G + G +D+A+
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Score = 93 bits (230), Expect = 2e-019
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Frame = +1
Query: 13 KASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNVRI 192
+A +EM + + PD+VTY++LI+ HDR N +++ MV KGC ++ ++N I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 193 QFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKGYK 372
R D L M + + + VTYN +I+GFF AG + A+ ++ M G
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 373 PNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQA-KL 549
P++ Y ++ LC G+ + + +D +++ ++ T ++ G+ K G++++A L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 550 IMGLVHKRVPPFSSKQLLPLKVHFVTVLHG 639
L S K L P V + T++ G
Sbjct: 458 FCSL--------SLKGLKPDIVTYTTMMSG 479
>TAIR9_protein||AT1G12300.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4184163-4186076 REVERSE
Length = 638
Score = 94 bits (231), Expect = 2e-019
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G L +A KEM G+ PD +TYT+LI F K + N + + MV KGC PN+ TF
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
N+ I R D +L M + D VTYN +I+GF G +A+ ++ M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
+ PN+ Y+ ++ LC G+ + + + + K ++ +++ G+ ++D
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 541 A-KLIMGLVHKRVPP 582
A L L K V P
Sbjct: 527 AWDLFCSLPLKGVKP 541
>TAIR9_protein||AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl
transferase family protein | chr1:1698574-1702715 REVERSE
Length = 1185
Score = 92 bits (228), Expect = 4e-019
Identities = 58/184 (31%), Positives = 88/184 (47%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
L +A A EM + G+ PD V YTTLI F K + + M + P++ T+
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I G +A L M +EPD+VT+ +I G+ AG + A RV+ M G
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAK 546
PNV Y T+I LCK G D + + + PN+ T +++GL K G +++A
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 547 LIMG 558
++G
Sbjct: 955 KLVG 958
>TAIR9_protein||AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl
transferase family protein | chr1:1698574-1702715 REVERSE
Length = 1185
Score = 92 bits (228), Expect = 4e-019
Identities = 58/184 (31%), Positives = 88/184 (47%)
Frame = +1
Query: 7 LDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTFNV 186
L +A A EM + G+ PD V YTTLI F K + + M + P++ T+
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 187 RIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHGKG 366
I G +A L M +EPD+VT+ +I G+ AG + A RV+ M G
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 367 YKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQAK 546
PNV Y T+I LCK G D + + + PN+ T +++GL K G +++A
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 547 LIMG 558
++G
Sbjct: 955 KLVG 958
>TAIR9_protein||AT1G64580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23985078-23988740 REVERSE
Length = 1053
Score = 91 bits (225), Expect = 9e-019
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 GFLDKASLAMKEMEKSGLKPDVVTYTTLISAFYKHDRYVVGNGLWNRMVLKGCRPNLTTF 180
G L+ A + EMEK GL DVVTY TL++ R+ + M+ + P++ TF
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 181 NVRIQFLVNRGRAWDASDLLMLMPKLQMEPDNVTYNMVIKGFFVAGFPEMAERVYTAMHG 360
I V +G +A +L M + ++P+NVTYN +I G + G A++ + M
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 361 KGYKPNVKIYQTMIHYLCKAGKFDLGYTMCKDCMRKKWYPNLDTVGVLLDGLVKKGQLDQ 540
KG PNV Y T+I CK D G + + + + ++ T L+ G + G+L
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 541 A-KLIMGLVHKRVPP 582
A + +V +RV P
Sbjct: 370 ALDIFCWMVSRRVTP 384
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,019,097,638
Number of Sequences: 33410
Number of Extensions: 15019097638
Number of Successful Extensions: 482539161
Number of sequences better than 0.0: 0
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