BLASTX 7.6.2
Query= UN28771 /QuerySize=978
(977 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING... 273 1e-073
>TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING PROTEIN 2);
double-stranded RNA binding | chr2:12134098-12135915 REVERSE
Length = 435
Score = 273 bits (697), Expect = 1e-073
Identities = 175/287 (60%), Positives = 201/287 (70%), Gaps = 41/287 (14%)
Frame = -2
Query: 955 NIDELEQVIIARALTNYRIKENIGSGSSSSAPVPFAKRFSMQSPRPTSPQPCRAATSRIL 776
NIDELEQVIIARAL NYRIKENIG+GSSSSAPVPFAK+F MQ+ RPTSPQP A TSRIL
Sbjct: 169 NIDELEQVIIARALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRIL 228
Query: 775 PFICPQPSSSSSRSRAAS---VERAMASALENRNY-RPQQRFATPGTAAVAPPYVPLRHL 608
PFICP+ S SSRS A+ ++R MA+ALE+R+Y RPQQRFA PPYVP+R
Sbjct: 229 PFICPKQPSRSSRSSLAATSGIDRIMAAALESRSYQRPQQRFAN-------PPYVPMRQF 281
Query: 607 ---CHRGMAPPVTIRTSVPVFSAPPMPPPPPSANTQQQLHPVYVPSMMRAAAPVRIAPPV 437
CH GMAPPVTIRT+VPVFSAPPMPPPP + NTQ VYVPS+MR A PVRIAPPV
Sbjct: 282 RSQCH-GMAPPVTIRTAVPVFSAPPMPPPPCTNNTQLP-SSVYVPSLMRTAPPVRIAPPV 339
Query: 436 TIRTVAPVFASVRKEAEPLPVRKANIQNPAKSTMIKVDETR---VQEKEGRTSPLLPE-- 272
TIRT PVFAS A P+ +R A K T ++ ETR VQEKE + P+LP+
Sbjct: 340 TIRTAVPVFAS----APPVRIRTA-----VKPT-VEAGETRISSVQEKE--SIPVLPDSL 387
Query: 271 ----EGSG---KPKISESAKETEKAAAAAAVK-EPETARERVENLKI 155
EGS ++KETE+A + K EPETARER+ENLKI
Sbjct: 388 EIGVEGSTITITDCEKTASKETERAEFKDSSKGEPETARERLENLKI 434
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,148,941,943
Number of Sequences: 33410
Number of Extensions: 15148941943
Number of Successful Extensions: 487983506
Number of sequences better than 0.0: 0
|