BLASTX 7.6.2
Query= UN28839 /QuerySize=1007
(1006 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G38260.1 | Symbols: | unknown protein | chr4:... 369 2e-102
TAIR9_protein||AT1G20730.1 | Symbols: | FUNCTIONS IN: molecular... 87 2e-017
TAIR9_protein||AT1G20740.1 | Symbols: | unknown protein | chr1:... 74 1e-013
>TAIR9_protein||AT4G38260.1 | Symbols: | unknown protein |
chr4:17937077-17938210 REVERSE
Length = 276
Score = 369 bits (946), Expect = 2e-102
Identities = 181/223 (81%), Positives = 194/223 (86%), Gaps = 2/223 (0%)
Frame = +2
Query: 29 MCIAVFSWQSHPLYPFLLFLNRDEYHNRETEALRWWEDGETLGGRDLVGGGTWLGCTRKG 208
MCIAVF WQSHPLYPFLLFLNRDE HNR TEALRWWEDGET+GGRDLVGGGTWLGCTR G
Sbjct: 1 MCIAVFLWQSHPLYPFLLFLNRDEDHNRATEALRWWEDGETVGGRDLVGGGTWLGCTRHG 60
Query: 209 RIAFLTNFRETSSIPDAKSRVHLPLRYLQSEKSPAEFAQEIEKEASLYNGFNLLVAHVLS 388
R+AFLTNF+E SS P AKSR LPLRYLQSEKSPAEFA+EI+ E SLYNGFNL+VAHVLS
Sbjct: 61 RLAFLTNFKEASSFPAAKSRGDLPLRYLQSEKSPAEFAEEIQDEISLYNGFNLVVAHVLS 120
Query: 389 KSMFYITHRPLHGDKQHLVTLVSPGIHVLSNANLDSPWPKCLRLRDAFNQLLTQNQGVEF 568
KSM YIT+RP HGDK LVT VSPGIHVLSNANLDSPWPKCLRLR+ F QLL +N EF
Sbjct: 121 KSMIYITNRPPHGDK--LVTQVSPGIHVLSNANLDSPWPKCLRLREGFQQLLAENGSGEF 178
Query: 569 PLMTMVEEVMTDTVKDQEPVLPPVFTPEI*YHLSSIFVDIPRP 697
P+ TMVEEVMT+TVKD+E LP VFTPE YHLSSIFVD+ RP
Sbjct: 179 PVKTMVEEVMTNTVKDEETELPHVFTPETEYHLSSIFVDMQRP 221
>TAIR9_protein||AT1G20730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF833 (InterPro:IPR008551), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20740.1); Has 303 Blast hits to 300 proteins
in 118 species: Archae - 0; Bacteria - 180; Metazoa - 8; Fungi - 0;
Plants - 63; Viruses - 2; Other Eukaryotes - 50 (source: NCBI BLink). |
chr1:7194276-7198681 FORWARD
Length = 568
Score = 87 bits (213), Expect = 2e-017
Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 10/165 (6%)
Frame = +2
Query: 134 WEDGETLGGRDLVGGGTWLGCTRKGRIAFLTNFRETS--SIPDAKSRVHLPLRYLQSEKS 307
W++ + L GR GTWLG + +GR+AFL + I A+ R L +L+S S
Sbjct: 39 WDESQVLSGRCAETDGTWLGISIRGRVAFLVEAGPVNRDRIIGAECRT---LDFLKSNLS 95
Query: 308 PAEFAQEIEKEASLYNG--FNLLVAHVLSKSMFYITHRPLHGDKQHLVTLVSPGIHVLSN 481
P +FA + ++ G ++L+VA ++S SMFYI L D V PG+H LS+
Sbjct: 96 PEDFADSLALDSGRNTGIAYHLIVADIVSNSMFYIYKPSLSEDGMVYTEPVGPGVHTLSS 155
Query: 482 ANLDSP-WPKCLRLRDAFNQLLTQNQGVEFPLMTMVEEVMTDTVK 613
A LDS + LRL+ F++ + N+ + P+ + EEVM DTV+
Sbjct: 156 AGLDSEVGHRDLRLKRYFSERI--NRELPEPISGLAEEVMYDTVE 198
>TAIR9_protein||AT1G20740.1 | Symbols: | unknown protein | chr1:7200394-7201538
FORWARD
Length = 267
Score = 74 bits (180), Expect = 1e-013
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Frame = +2
Query: 137 EDGETLGGRDLVGGGTWLGCTRKGRIAFLTNFR--ETSSIPDAKSRVHLPLRYLQSEKSP 310
E + L GR GTWLG + +GR+AFL A+SR L +L+S +SP
Sbjct: 46 ETDQILSGRCPETDGTWLGISTRGRVAFLVEAGTINRDRFNGAESRT---LEFLESNESP 102
Query: 311 AEFAQEIEKEASLYN---GFNLLVAHVLSKSMFYITHRPLHGDKQHLVT-LVSPGIHVLS 478
+FA+ + F+L+VA + S SM YI+ +P D + T V PG+H LS
Sbjct: 103 EDFAKSSAADYIRNKNTAAFHLIVADIASNSMLYIS-KPRFSDYGIVYTEPVGPGVHTLS 161
Query: 479 NANLDSP-WPKCLRLRDAFNQLLTQNQGVEFPLMTMVEEVMTDTVKDQEPVL 631
+A LDS + LR+R +F +++ + + P + + E+M D VK E VL
Sbjct: 162 SAGLDSDVGYRDLRMRHSFCEMINRER---LPPIRDIAEIMYDPVKAYESVL 210
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,190,629,190
Number of Sequences: 33410
Number of Extensions: 15190629190
Number of Successful Extensions: 488031092
Number of sequences better than 0.0: 0
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