BLASTX 7.6.2
Query= UN29276 /QuerySize=865
(864 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G69935.1 | Symbols: SHW1 | SHW1 (SHORT HYPOCOT... 139 3e-033
TAIR9_protein||AT4G33780.1 | Symbols: | FUNCTIONS IN: molecular... 81 7e-016
>TAIR9_protein||AT1G69935.1 | Symbols: SHW1 | SHW1 (SHORT HYPOCOTYL IN WHITE
LIGHT1) | chr1:26342072-26343082 REVERSE
Length = 193
Score = 139 bits (349), Expect = 3e-033
Identities = 77/98 (78%), Positives = 81/98 (82%), Gaps = 8/98 (8%)
Frame = -2
Query: 770 RRYDESDDRFFFDGYEYDVVSDDD--------DDERESSVDLLVRFLTSMFRKVSKRAKR 615
RR ESDDRFF G YDVV DDD +DERESSVDLL+RFL SMF+KVSKR K+
Sbjct: 58 RRRYESDDRFFGGGDNYDVVPDDDGFSDDDDEEDERESSVDLLIRFLRSMFKKVSKRTKK 117
Query: 614 ASRRILPAAMSPRLVSFAVDGILLLGSLSITRAFLEVI 501
ASRRILPAAMSPRLVSFAVDGILLLGSLSITRAFLEVI
Sbjct: 118 ASRRILPAAMSPRLVSFAVDGILLLGSLSITRAFLEVI 155
>TAIR9_protein||AT4G33780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is: SHW1 (SHORT
HYPOCOTYL IN WHITE LIGHT1) (TAIR:AT1G69935.1); Has 20 Blast hits to 20
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:16202174-16203617 REVERSE
Length = 204
Score = 81 bits (199), Expect = 7e-016
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -2
Query: 725 EYDVVSDDDDDERES-SVDLLVRFLTSMFRKVSKRAKRASRRILPAAMSPRLVSFAVDGI 549
+YD DDDD E E S+DLL+RF+ ++FRK+SKRA++A R ILP ++S +LV F+V+G+
Sbjct: 79 DYDGEEDDDDHEEEDRSLDLLLRFVENVFRKISKRARKAVRSILPVSISTKLVGFSVNGV 138
Query: 548 LLLGSLSITRAFLEV 504
L+L L I +AFLEV
Sbjct: 139 LILAFLWILKAFLEV 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,317,458,694
Number of Sequences: 33410
Number of Extensions: 15317458694
Number of Successful Extensions: 488059017
Number of sequences better than 0.0: 0
|