Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN29414


BLASTX 7.6.2

Query= UN29414 /QuerySize=645
        (644 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297823285|ref|XP_002879525.1| hypothetical protein ARALYDRAFT...    153   3e-035
gi|145330360|ref|NP_001078005.1| protein CLAVATA3/ESR-related 42...    148   8e-034
gi|297825079|ref|XP_002880422.1| hypothetical protein ARALYDRAFT...    118   6e-025

>gi|297823285|ref|XP_002879525.1| hypothetical protein ARALYDRAFT_482457
        [Arabidopsis lyrata subsp. lyrata]

          Length = 88

 Score =  153 bits (384), Expect = 3e-035
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = +1

Query: 163 MRSPHIIVSLALLFFLSLILQAHQRTIGQTHRIGSNVQHVNDAAVTSPEGRRRETFRVRR 342
           MRSPHII+SL L FFLSLILQ HQRT  QTH+IGSNVQH +D AVTSPEG+RRE FRVRR
Sbjct:   1 MRSPHIIISLVLFFFLSLILQTHQRTTDQTHQIGSNVQHFSDMAVTSPEGKRRERFRVRR 60

Query: 343 PMTSWRKGKMLNNSEHGVPSGPNPISNR 426
           PMT+WRKGKML  +EHGVPSGPNPISNR
Sbjct:  61 PMTTWRKGKMLGANEHGVPSGPNPISNR 88

>gi|145330360|ref|NP_001078005.1| protein CLAVATA3/ESR-related 42 [Arabidopsis
        thaliana]

          Length = 88

 Score =  148 bits (372), Expect = 8e-034
 Identities = 69/88 (78%), Positives = 77/88 (87%)
 Frame = +1

Query: 163 MRSPHIIVSLALLFFLSLILQAHQRTIGQTHRIGSNVQHVNDAAVTSPEGRRRETFRVRR 342
           MRSPHI +SL  LFFL LI+Q HQRTI QTH+IGSNVQHV+D AVTSPEG+RRE FRVRR
Sbjct:   1 MRSPHITISLVFLFFLFLIIQTHQRTIDQTHQIGSNVQHVSDMAVTSPEGKRRERFRVRR 60

Query: 343 PMTSWRKGKMLNNSEHGVPSGPNPISNR 426
           PMT+W KGKM+  +EHGVPSGPNPISNR
Sbjct:  61 PMTTWLKGKMIGANEHGVPSGPNPISNR 88

>gi|297825079|ref|XP_002880422.1| hypothetical protein ARALYDRAFT_481080
        [Arabidopsis lyrata subsp. lyrata]

          Length = 72

 Score =  118 bits (295), Expect = 6e-025
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +1

Query: 223 QAHQRTIGQTHRIGSNVQHVNDAAVTSPEGRRRETFRVRRPMTSWRKGKMLNNSEHGVPS 402
           + HQRTI QTHRI SNVQH+ D A T PEG+RRE FRVRRPMT+WRKGKML  SEHGVPS
Sbjct:   5 KTHQRTIDQTHRISSNVQHIRDMAATLPEGKRRERFRVRRPMTTWRKGKMLGASEHGVPS 64

Query: 403 GPNPISNR 426
           GPNPISNR
Sbjct:  65 GPNPISNR 72

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,445,843,930,514
Number of Sequences: 15229318
Number of Extensions: 3445843930514
Number of Successful Extensions: 826618224
Number of sequences better than 0.0: 0