BLASTX 7.6.2
Query= UN29705 /QuerySize=877
(876 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9ZQC0|Q9ZQC0_ARATH DNA-directed RNA polymerase subunit OS=Ar... 106 3e-021
tr|Q8LE40|Q8LE40_ARATH DNA-directed RNA polymerase subunit OS=Ar... 106 6e-021
tr|Q9LNK0|Q9LNK0_ARATH DNA-directed RNA polymerase subunit OS=Ar... 102 5e-020
tr|C6T364|C6T364_SOYBN Putative uncharacterized protein OS=Glyci... 83 4e-014
tr|Q9YEZ3|Q9YEZ3_AERPE Archaeal transcription factor S OS=Aeropy... 68 1e-009
tr|A4WLS3|A4WLS3_PYRAR DNA-directed RNA polymerase, subunit M OS... 68 1e-009
tr|A4RUS3|A4RUS3_OSTLU Predicted protein OS=Ostreococcus lucimar... 67 2e-009
tr|B1YAF4|B1YAF4_THENV Transcription termination factor Tfs OS=T... 65 8e-009
tr|A1RRN5|A1RRN5_PYRIL DNA-directed RNA polymerase, subunit M OS... 65 1e-008
tr|A3MUU7|A3MUU7_PYRCJ DNA-directed RNA polymerase, subunit M OS... 65 1e-008
tr|Q8ZTX9|Q8ZTX9_PYRAE DNA-directed RNA polymerase subunit M OS=... 65 1e-008
tr|B1L5R4|B1L5R4_KORCO DNA-directed RNA polymerase, subunit M OS... 64 1e-008
tr|B3L0T6|B3L0T6_PLAKH Transcription factor, putative OS=Plasmod... 64 2e-008
tr|C1DZH6|C1DZH6_9CHLO DNA-directed RNA polymerase subunit OS=Mi... 64 2e-008
tr|D5VRR1|D5VRR1_9EURY Transcription termination factor Tfs OS=M... 64 2e-008
tr|A8NJC4|A8NJC4_COPC7 DNA-directed RNA polymerase subunit OS=Co... 64 2e-008
tr|C7P7U4|C7P7U4_METFA Transcription termination factor Tfs OS=M... 63 3e-008
>tr|Q9ZQC0|Q9ZQC0_ARATH DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=AT4g07950 PE=3 SV=1
Length = 106
Score = 106 bits (264), Expect = 3e-021
Identities = 51/65 (78%), Positives = 56/65 (86%), Gaps = 3/65 (4%)
Frame = +3
Query: 153 MEFCPTCGNLLRYV---PSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPVLKKDDIPT 323
MEFCPTCGNLLRY S+FFCSTCPY+A IER+VEIKKKQLLVKKSI+PV+ KDDIPT
Sbjct: 1 MEFCPTCGNLLRYEGGGSSRFFCSTCPYVANIERRVEIKKKQLLVKKSIEPVVTKDDIPT 60
Query: 324 GPETE 338
ETE
Sbjct: 61 AAETE 65
Score = 91 bits (223), Expect = 2e-016
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 553 APCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWREE 675
APCPRCGHDKAYFK+MQIRSADEPESRFYRC+KCE TWREE
Sbjct: 66 APCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE 106
>tr|Q8LE40|Q8LE40_ARATH DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana PE=3 SV=1
Length = 106
Score = 106 bits (262), Expect = 6e-021
Identities = 51/65 (78%), Positives = 56/65 (86%), Gaps = 3/65 (4%)
Frame = +3
Query: 153 MEFCPTCGNLLRYV---PSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPVLKKDDIPT 323
MEFCPTCGNLLRY S+FFCSTCPY+A IER+VEIKKKQLLVKKSI+PV+ KDDIPT
Sbjct: 1 MEFCPTCGNLLRYEGGGSSRFFCSTCPYVAYIERRVEIKKKQLLVKKSIEPVVTKDDIPT 60
Query: 324 GPETE 338
ETE
Sbjct: 61 AAETE 65
Score = 91 bits (223), Expect = 2e-016
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 553 APCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWREE 675
APCPRCGHDKAYFK+MQIRSADEPESRFYRC+KCE TWREE
Sbjct: 66 APCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE 106
>tr|Q9LNK0|Q9LNK0_ARATH DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=At1g01210 PE=2 SV=1
Length = 106
Score = 102 bits (254), Expect = 5e-020
Identities = 50/65 (76%), Positives = 55/65 (84%), Gaps = 3/65 (4%)
Frame = +3
Query: 153 MEFCPTCGNLLRYV---PSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPVLKKDDIPT 323
MEFCPTCGNLLRY S+FFCSTCPY+A I+RQVEIKKKQLLVKKSI+ V+ KDDIPT
Sbjct: 1 MEFCPTCGNLLRYEGGGNSRFFCSTCPYVAYIQRQVEIKKKQLLVKKSIEAVVTKDDIPT 60
Query: 324 GPETE 338
ETE
Sbjct: 61 AAETE 65
Score = 91 bits (223), Expect = 2e-016
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 553 APCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWREE 675
APCPRCGHDKAYFK+MQIRSADEPESRFYRC+KCE TWREE
Sbjct: 66 APCPRCGHDKAYFKSMQIRSADEPESRFYRCLKCEFTWREE 106
>tr|C6T364|C6T364_SOYBN Putative uncharacterized protein OS=Glycine max PE=4
SV=1
Length = 111
Score = 83 bits (203), Expect = 4e-014
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 6/68 (8%)
Frame = +3
Query: 153 MEFCPTCGNLLRYV------PSQFFCSTCPYIARIERQVEIKKKQLLVKKSIDPVLKKDD 314
MEFCPTCGN+L+Y PS+FFCS CPY+ IE +VEIK+KQ LV K I+P+ +DD
Sbjct: 1 MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60
Query: 315 IPTGPETE 338
+ TE
Sbjct: 61 MTNAASTE 68
>tr|Q9YEZ3|Q9YEZ3_AERPE Archaeal transcription factor S OS=Aeropyrum pernix
GN=tfs PE=3 SV=2
Length = 118
Score = 68 bits (165), Expect = 1e-009
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1
Query: 550 SAPCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
S CP+CGHD+ YF MQ RSADEP +RFYRC +C TWRE
Sbjct: 76 SVTCPKCGHDEVYFWMMQTRSADEPMTRFYRCKRCRYTWRE 116
>tr|A4WLS3|A4WLS3_PYRAR DNA-directed RNA polymerase, subunit M OS=Pyrobaculum
arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1789 PE=3 SV=1
Length = 110
Score = 68 bits (164), Expect = 1e-009
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGHD+AYF Q R+ADEP +RFYRC KC TWRE
Sbjct: 71 CPKCGHDEAYFWVQQTRAADEPPTRFYRCTKCGHTWRE 108
>tr|A4RUS3|A4RUS3_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_34016 PE=4 SV=1
Length = 120
Score = 67 bits (162), Expect = 2e-009
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +1
Query: 550 SAPCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
SA CP C HD+AYF +QIRSADEP S FY+CVKC + WRE
Sbjct: 79 SATCPGCAHDEAYFMQIQIRSADEPMSVFYKCVKCARQWRE 119
>tr|B1YAF4|B1YAF4_THENV Transcription termination factor Tfs OS=Thermoproteus
neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1681 PE=4
SV=1
Length = 110
Score = 65 bits (157), Expect = 8e-009
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGHD+AY Q R+ADEP +RFYRC KC TWRE
Sbjct: 71 CPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGHTWRE 108
>tr|A1RRN5|A1RRN5_PYRIL DNA-directed RNA polymerase, subunit M OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0439 PE=3 SV=1
Length = 110
Score = 65 bits (156), Expect = 1e-008
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGHD+AY Q R+ADEP +RFYRC KC TWRE
Sbjct: 71 CPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGYTWRE 108
>tr|A3MUU7|A3MUU7_PYRCJ DNA-directed RNA polymerase, subunit M OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=Pcal_0989 PE=3 SV=1
Length = 124
Score = 65 bits (156), Expect = 1e-008
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGHD+AYF Q R+ADEP +RFY+C KC WRE
Sbjct: 85 CPKCGHDEAYFWVQQTRAADEPPTRFYKCTKCGHVWRE 122
>tr|Q8ZTX9|Q8ZTX9_PYRAE DNA-directed RNA polymerase subunit M OS=Pyrobaculum
aerophilum GN=PAE3040 PE=3 SV=1
Length = 110
Score = 65 bits (156), Expect = 1e-008
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGHD+AY Q R+ADEP +RFYRC KC TWRE
Sbjct: 71 CPKCGHDEAYVWVQQTRAADEPPTRFYRCTKCGYTWRE 108
>tr|B1L5R4|B1L5R4_KORCO DNA-directed RNA polymerase, subunit M OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1047 PE=3 SV=1
Length = 108
Score = 64 bits (155), Expect = 1e-008
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +1
Query: 544 LLSAPCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
++ A CP+CG+DKAYF+ +Q R+ADEP +R Y+C KC +WRE
Sbjct: 64 VVEARCPKCGNDKAYFQIVQTRAADEPPTRIYKCTKCGYSWRE 106
>tr|B3L0T6|B3L0T6_PLAKH Transcription factor, putative OS=Plasmodium knowlesi
(strain H) GN=PKH_041330 PE=4 SV=1
Length = 106
Score = 64 bits (154), Expect = 2e-008
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 553 APCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
A CP+C HD+AYF +MQIRSADEP + FY C+KC W+E
Sbjct: 67 AVCPKCTHDEAYFYSMQIRSADEPSTLFYICIKCNHHWKE 106
>tr|C1DZH6|C1DZH6_9CHLO DNA-directed RNA polymerase subunit OS=Micromonas sp.
RCC299 GN=MICPUN_78504 PE=3 SV=1
Length = 109
Score = 64 bits (154), Expect = 2e-008
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 550 SAPCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
SA CP+C H +AYF +QIRSADEP S FY+C KC WRE
Sbjct: 68 SATCPKCDHGQAYFMQIQIRSADEPMSTFYKCCKCANQWRE 108
>tr|D5VRR1|D5VRR1_9EURY Transcription termination factor Tfs
OS=Methanocaldococcus infernus ME GN=Metin_0595 PE=4 SV=1
Length = 104
Score = 64 bits (153), Expect = 2e-008
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGH +AY+ Q R ADEPE+RFYRC KC TWRE
Sbjct: 65 CPKCGHTEAYWWLQQTRCADEPETRFYRCKKCGHTWRE 102
>tr|A8NJC4|A8NJC4_COPC7 DNA-directed RNA polymerase subunit OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_09692 PE=3 SV=1
Length = 106
Score = 64 bits (153), Expect = 2e-008
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1
Query: 553 APCPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
A CP+C DKAYF +QIRSADEP + FYRCV C WRE
Sbjct: 66 ASCPKCNFDKAYFYQLQIRSADEPMTTFYRCVNCAHQWRE 105
>tr|C7P7U4|C7P7U4_METFA Transcription termination factor Tfs
OS=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86)
GN=Mefer_0808 PE=3 SV=1
Length = 108
Score = 63 bits (152), Expect = 3e-008
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 559 CPRCGHDKAYFKTMQIRSADEPESRFYRCVKCEQTWRE 672
CP+CGH++AY+ Q R ADEPE+RFY+C KC TWRE
Sbjct: 69 CPKCGHNEAYWWLQQTRCADEPETRFYKCKKCGHTWRE 106
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,429,664,036,568
Number of Sequences: 11397958
Number of Extensions: 2429664036568
Number of Successful Extensions: 849142406
Number of sequences better than 0.0: 0
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