BLASTX 7.6.2
Query= UN29714 /QuerySize=1165
(1164 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 382 4e-106
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 230 2e-060
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 159 4e-039
TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:... 84 2e-016
TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein | chr1:... 58 1e-008
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 382 bits (979), Expect = 4e-106
Identities = 213/277 (76%), Positives = 229/277 (82%), Gaps = 19/277 (6%)
Frame = +1
Query: 67 VCGSKRSLFEDLSAASSSSSSSPPVSKKLRCFSSSSPPRFPPPPASSSSLLLNHLAAIFP 246
VCG KRSLFEDL+AA SPPVSKKLRCFSSSS RF PP SSSLLL+HLAAIFP
Sbjct: 5 VCG-KRSLFEDLAAA------SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFP 57
Query: 247 DMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESSI-QGEAKVEAPQQQQQQQQQ 423
DMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ Q ++ P + QQQ
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGS 117
Query: 424 GEEE--VLNMDGAEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARAGGADAAAAA 597
+EE VLN+DG EWV+LFVREMMNASDMKDAK RAARALEALEKSI AR G DA
Sbjct: 118 AKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINART-GTDA---- 172
Query: 598 AAQSSSLQQENSMLRQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQ 777
+LQQEN ML+QQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQ+VTQYQ
Sbjct: 173 ---MQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQ 229
Query: 778 EQLRTLEVNNYALTLHLKQAQQNNGSIPGRFHPDVF* 888
EQLRTLEVNNYALTLHLKQAQQN+ SIPGR+HPDVF*
Sbjct: 230 EQLRTLEVNNYALTLHLKQAQQNS-SIPGRYHPDVF* 265
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 230 bits (585), Expect = 2e-060
Identities = 127/172 (73%), Positives = 138/172 (80%), Gaps = 10/172 (5%)
Frame = +1
Query: 67 VCGSKRSLFEDLSAASSSSSSSPPVSKKLRCFSSSSPPRFPPPPASSSSLLLNHLAAIFP 246
VCG KRSLFEDL+AA SPPVSKKLRCFSSSS RF PP SSSLLL+HLAAIFP
Sbjct: 5 VCG-KRSLFEDLAAA------SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFP 57
Query: 247 DMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESSI-QGEAKVEAPQQQQQQQQQ 423
DMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ Q ++ P + QQQ
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGS 117
Query: 424 GEEE--VLNMDGAEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARAG 573
+EE VLN+DG EWV+LFVREMMNASDMKDAK RAARALEALEKSI AR G
Sbjct: 118 AKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTG 169
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 159 bits (401), Expect = 4e-039
Identities = 95/242 (39%), Positives = 140/242 (57%), Gaps = 20/242 (8%)
Frame = +1
Query: 124 SSSPPVSKKLRCFSSSSPPRFPPPPASSSSLLLNHLAAIFPDMDHQILERAIEECGDDID 303
+SSPP SK+ RCFS S+ P + PP+SS L+ L + FP ++ +L +A+E+ G D +
Sbjct: 16 NSSPPSSKRFRCFSPSNSPIWSSPPSSS----LDQLHSAFPHIELTVLVKALEDNGSDFN 71
Query: 304 SAIRCLNQLRLESTNKNSESSIQGEAKVEAPQQQQQQQQQGEEEVLNMDGAEWVDLFVRE 483
+A++ L K E + G A Q+ G G +WV+L VRE
Sbjct: 72 AAMKSLYSFASSEEKKAEELAAGG-----AATQETDAVCGGNPPT---SGDDWVELLVRE 123
Query: 484 MMNASDMKDAKDRAARALEALEKSIKARAGGADAAAAAAAQSSSLQQENSMLRQQLEAIV 663
++ +S DAK RAAR LEALEK + AR A + Q+E ++QQ+E +V
Sbjct: 124 VLQSSGTDDAKVRAARVLEALEKMLSAR--------AREEAGNKFQEEKVAVQQQVETLV 175
Query: 664 QENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQEQLRTLEVNNYALTLHLKQAQQ 843
++N++LKRAV Q +RQ+ ED + +L L+Q+V QYQE+LR LEVNNYAL + L+Q +
Sbjct: 176 KDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEH 235
Query: 844 NN 849
N
Sbjct: 236 GN 237
Score = 97 bits (240), Expect = 2e-020
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Frame = +1
Query: 517 DRAARALEALEKSIKARAGGADAAAAAAAQSSSLQQENSMLRQQLEAIVQENSLLKRAVV 696
D RA LE K +A A + Q+E ++QQ+E +V++N++LKRAV
Sbjct: 132 DAKVRAARVLEALEKML-----SARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVA 186
Query: 697 TQQKRQRESEDQSQELQHLRQMVTQYQEQLRTLEVNNYALTLHLKQAQQNNGSIPGRFHP 876
Q +RQ+ ED + +L L+Q+V QYQE+LR LEVNNYAL + L+Q + N S+P RF+P
Sbjct: 187 IQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGN-SMPARFNP 245
Query: 877 DVF 885
DVF
Sbjct: 246 DVF 248
>TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:560135-560860
FORWARD
Length = 180
Score = 84 bits (206), Expect = 2e-016
Identities = 34/94 (36%), Positives = 66/94 (70%)
Frame = +1
Query: 607 SSSLQQENSMLRQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQEQL 786
++S + E + +++ L++++ +N +LKR + Q +R E+E++++++ HLR +V QYQEQ+
Sbjct: 87 NASKKLEYASMKESLQSLINDNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQV 146
Query: 787 RTLEVNNYALTLHLKQAQQNNGSIPGRFHPDVF* 888
LE++NYA+ LHL+++QQ S G PD++*
Sbjct: 147 HKLELSNYAMKLHLQRSQQQQTSFSGNLPPDIY* 180
>TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein |
chr1:30110059-30111051 REVERSE
Length = 181
Score = 58 bits (138), Expect = 1e-008
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 124 SSSPPVSKKLRCFSSSSPPRFPPPPASSSSLLLNHLAAIFPDMDHQILERAIEECGDDID 303
+SSPP SK+ RCFS S+ P + PP+SS L+ L + FP ++ +L +A+E+ G D +
Sbjct: 16 NSSPPSSKRFRCFSPSNSPIWSSPPSSS----LDQLHSAFPHIELTVLVKALEDNGSDFN 71
Query: 304 SAIRCLNQLRLESTNKNSESSIQGEAKVE 390
+A++ L K E + G A E
Sbjct: 72 AAMKSLYSFASSEEKKAEELAAGGAATQE 100
Score = 50 bits (117), Expect = 3e-006
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1
Query: 451 GAEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARA 570
G +WV+L VRE++ +S DAK RAAR LEALEK + ARA
Sbjct: 113 GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARA 152
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,532,711,110
Number of Sequences: 33410
Number of Extensions: 15532711110
Number of Successful Extensions: 498626190
Number of sequences better than 0.0: 0
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