BLASTX 7.6.2
Query= UN29784 /QuerySize=742
(741 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G30475.1 | Symbols: | FUNCTIONS IN: molecular... 212 3e-055
TAIR9_protein||AT1G30475.2 | Symbols: | FUNCTIONS IN: molecular... 202 3e-052
TAIR9_protein||AT1G30475.3 | Symbols: | FUNCTIONS IN: molecular... 202 3e-052
TAIR9_protein||AT1G56200.1 | Symbols: emb1303 | emb1303 (embryo ... 154 8e-038
TAIR9_protein||AT1G56200.2 | Symbols: emb1303 | emb1303 (embryo ... 154 8e-038
TAIR9_protein||AT1G30475.4 | Symbols: | FUNCTIONS IN: molecular... 91 7e-019
>TAIR9_protein||AT1G30475.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 127 Blast hits to 127 proteins in 31 species:
Archae - 0; Bacteria - 14; Metazoa - 65; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789943 REVERSE
Length = 192
Score = 212 bits (538), Expect = 3e-055
Identities = 114/174 (65%), Positives = 123/174 (70%), Gaps = 16/174 (9%)
Frame = +3
Query: 42 MTVMNPSLCIDTQPFVYLPPLSSHF---GKFDGRYYPPTGVPMQSH--SQIKSPSLKAVA 206
M VMNPSLCI TQ VYL P F G RY PT V MQ SQ K PSL+
Sbjct: 30 MPVMNPSLCIGTQTSVYLAPREKSFTSNGNSQRRY--PTSVSMQRQPWSQSKFPSLQDAV 87
Query: 207 STGGAFSTKGFGFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPK 386
SK+K VFACN+ALN+KCSQGQTQTVTR+SPT T APTHGK KSPK
Sbjct: 88 QPVVV---------SKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPK 138
Query: 387 LDDGGSGFPPRDDGGGGGGGGGGESFSGGFFLFGFLMFMGYLKDLEGEHESSH* 548
LDDGG+GFPPRDDGGGGGGGGGG S SGGFFLFGFL+FMGYLKDLEGEHE++H*
Sbjct: 139 LDDGGNGFPPRDDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHENNH* 192
>TAIR9_protein||AT1G30475.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species:
Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789717 REVERSE
Length = 163
Score = 202 bits (512), Expect = 3e-052
Identities = 109/168 (64%), Positives = 118/168 (70%), Gaps = 16/168 (9%)
Frame = +3
Query: 60 SLCIDTQPFVYLPPLSSHF---GKFDGRYYPPTGVPMQSH--SQIKSPSLKAVASTGGAF 224
SLCI TQ VYL P F G RY PT V MQ SQ K PSL+
Sbjct: 7 SLCIGTQTSVYLAPREKSFTSNGNSQRRY--PTSVSMQRQPWSQSKFPSLQDAVQPVVV- 63
Query: 225 STKGFGFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPKLDDGGS 404
SK+K VFACN+ALN+KCSQGQTQTVTR+SPT T APTHGK KSPKLDDGG+
Sbjct: 64 --------SKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGN 115
Query: 405 GFPPRDDGGGGGGGGGGESFSGGFFLFGFLMFMGYLKDLEGEHESSH* 548
GFPPRDDGGGGGGGGGG S SGGFFLFGFL+FMGYLKDLEGEHE++H*
Sbjct: 116 GFPPRDDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHENNH* 163
>TAIR9_protein||AT1G30475.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 121 Blast hits to 121 proteins in 30 species:
Archae - 0; Bacteria - 14; Metazoa - 59; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:10788501-10789717 REVERSE
Length = 163
Score = 202 bits (512), Expect = 3e-052
Identities = 109/168 (64%), Positives = 118/168 (70%), Gaps = 16/168 (9%)
Frame = +3
Query: 60 SLCIDTQPFVYLPPLSSHF---GKFDGRYYPPTGVPMQSH--SQIKSPSLKAVASTGGAF 224
SLCI TQ VYL P F G RY PT V MQ SQ K PSL+
Sbjct: 7 SLCIGTQTSVYLAPREKSFTSNGNSQRRY--PTSVSMQRQPWSQSKFPSLQDAVQPVVV- 63
Query: 225 STKGFGFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPKLDDGGS 404
SK+K VFACN+ALN+KCSQGQTQTVTR+SPT T APTHGK KSPKLDDGG+
Sbjct: 64 --------SKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGN 115
Query: 405 GFPPRDDGGGGGGGGGGESFSGGFFLFGFLMFMGYLKDLEGEHESSH* 548
GFPPRDDGGGGGGGGGG S SGGFFLFGFL+FMGYLKDLEGEHE++H*
Sbjct: 116 GFPPRDDGGGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGEHENNH* 163
>TAIR9_protein||AT1G56200.1 | Symbols: emb1303 | emb1303 (embryo defective 1303)
| chr1:21030852-21031886 FORWARD
Length = 155
Score = 154 bits (387), Expect = 8e-038
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +3
Query: 240 GFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPKLDDGGSGFPPR 419
G GS+ K S+ C++A+NAKCS+GQTQTVTRESPT T AP H KEKSP LDDGG GFPPR
Sbjct: 50 GLGSRRK-SLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSPSLDDGGDGFPPR 108
Query: 420 DDGGGGGGGGGGESFSGGFFLFGFLMFMGYLKDLEGEHESSH*RER 557
DDG GGGGGGGG ++SGGFF FGFL F+G LKD EGE + R R
Sbjct: 109 DDGDGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 154
>TAIR9_protein||AT1G56200.2 | Symbols: emb1303 | emb1303 (embryo defective 1303)
| chr1:21030852-21031886 FORWARD
Length = 152
Score = 154 bits (387), Expect = 8e-038
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +3
Query: 240 GFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPKLDDGGSGFPPR 419
G GS+ K S+ C++A+NAKCS+GQTQTVTRESPT T AP H KEKSP LDDGG GFPPR
Sbjct: 47 GLGSRRK-SLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSPSLDDGGDGFPPR 105
Query: 420 DDGGGGGGGGGGESFSGGFFLFGFLMFMGYLKDLEGEHESSH*RER 557
DDG GGGGGGGG ++SGGFF FGFL F+G LKD EGE + R R
Sbjct: 106 DDGDGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 151
>TAIR9_protein||AT1G30475.4 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis
thaliana protein match is: emb1303 (embryo defective 1303)
(TAIR:AT1G56200.1); Has 15 Blast hits to 15 proteins in 2 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:10788821-10789717 REVERSE
Length = 133
Score = 91 bits (224), Expect = 7e-019
Identities = 60/115 (52%), Positives = 65/115 (56%), Gaps = 16/115 (13%)
Frame = +3
Query: 60 SLCIDTQPFVYLPPLSSHF---GKFDGRYYPPTGVPMQSH--SQIKSPSLKAVASTGGAF 224
SLCI TQ VYL P F G RY PT V MQ SQ K PSL+
Sbjct: 7 SLCIGTQTSVYLAPREKSFTSNGNSQRRY--PTSVSMQRQPWSQSKFPSLQDAVQPVVV- 63
Query: 225 STKGFGFGSKSKTSVFACNAALNAKCSQGQTQTVTRESPTTTLAPTHGKEKSPKL 389
SK+K VFACN+ALN+KCSQGQTQTVTR+SPT T APTHGK P L
Sbjct: 64 --------SKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKLFHPLL 110
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,575,203,587
Number of Sequences: 33410
Number of Extensions: 15575203587
Number of Successful Extensions: 498660133
Number of sequences better than 0.0: 0
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