BLASTX 7.6.2
Query= UN29854 /QuerySize=974
(973 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATCG00860.1 | Symbols: YCF2.1 | Encodes an unknow... 415 3e-116
TAIR9_protein||ATCG01280.1 | Symbols: YCF2.2 | hypothetical prot... 415 3e-116
TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (... 51 1e-006
>TAIR9_protein||ATCG00860.1 | Symbols: YCF2.1 | Encodes an unknown protein. This
gene is regulated by AtSIG6 transcriptionally. | chrC:86474-93358
FORWARD
Length = 2295
Score = 415 bits (1065), Expect = 3e-116
Identities = 200/205 (97%), Positives = 202/205 (98%)
Frame = +3
Query: 3 EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFL 182
EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPY AGSFRGKRIIYDEKYELQENDSEFL
Sbjct: 2082 EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSAGSFRGKRIIYDEKYELQENDSEFL 2141
Query: 183 QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG 362
QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG
Sbjct: 2142 QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG 2201
Query: 363 LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLS 542
LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNT SESYQYLS
Sbjct: 2202 LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNTRSESYQYLS 2261
Query: 543 NLFLSNGTLVDRMTKTLLKKR*LFS 617
NLF+SNGTL+DRMTKTLLKKR LFS
Sbjct: 2262 NLFISNGTLLDRMTKTLLKKRWLFS 2286
>TAIR9_protein||ATCG01280.1 | Symbols: YCF2.2 | hypothetical protein |
chrC:145291-152175 REVERSE
Length = 2295
Score = 415 bits (1065), Expect = 3e-116
Identities = 200/205 (97%), Positives = 202/205 (98%)
Frame = +3
Query: 3 EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFL 182
EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPY AGSFRGKRIIYDEKYELQENDSEFL
Sbjct: 2082 EDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSAGSFRGKRIIYDEKYELQENDSEFL 2141
Query: 183 QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG 362
QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG
Sbjct: 2142 QSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKG 2201
Query: 363 LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLS 542
LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNT SESYQYLS
Sbjct: 2202 LLTSQTDPPTSIYKRWFIKNTQEKHFELLIQRQRWLRTNSSLSNGFFRSNTRSESYQYLS 2261
Query: 543 NLFLSNGTLVDRMTKTLLKKR*LFS 617
NLF+SNGTL+DRMTKTLLKKR LFS
Sbjct: 2262 NLFISNGTLLDRMTKTLLKKRWLFS 2286
>TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:29447317-29450181 FORWARD
Length = 288
Score = 51 bits (120), Expect = 1e-006
Identities = 29/37 (78%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Frame = +2
Query: 617 SPESEA-PEQVP-GEGEATTAAPEITTSNYKEPISS* 721
S ESEA P+QVP EGEATT APEITTSN KEPISS*
Sbjct: 252 STESEAVPQQVPAAEGEATTTAPEITTSNTKEPISS* 288
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,575,203,587
Number of Sequences: 33410
Number of Extensions: 15575203587
Number of Successful Extensions: 498660133
Number of sequences better than 0.0: 0
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