BLASTX 7.6.2
Query= UN29903 /QuerySize=806
(805 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b... 329 2e-090
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi... 302 3e-082
TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABI... 199 2e-051
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI... 199 2e-051
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA... 197 1e-050
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 181 6e-046
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 180 1e-045
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 180 1e-045
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b... 175 4e-044
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin... 173 1e-043
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin... 173 1e-043
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 47 1e-005
>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
47B); RNA binding | chr3:6611398-6613823 REVERSE
Length = 436
Score = 329 bits (841), Expect = 2e-090
Identities = 171/224 (76%), Positives = 185/224 (82%), Gaps = 8/224 (3%)
Frame = +1
Query: 115 MAAMQYPGAAAMMMMQQQQMMMYPHQYVPYNY-QQQQQHPHF-QYASYQ----QQHKTHE 276
MAAMQYP AAAMMMMQQQQM+MYPHQYVPYN QQ HP QY SYQ QQHK +
Sbjct: 41 MAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAID 100
Query: 277 RGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGA 456
RGSGDDVKTLW+GDLL+WMDETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGFVEFLS A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 457 TAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQE 636
AEEVLQN++GSVMPNS+Q FR+NWASFSTGEKRAVENGP+LS+FVGDLSPDVTD LL E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 637 LFVERYPSVKSAKVVIDSTPAGLKLW-FC*FGDET-RDQGFDEM 762
F +RYPSVKSAKVVIDS K + F FGDE R + EM
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEM 264
>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE
Length = 446
Score = 302 bits (771), Expect = 3e-082
Identities = 160/235 (68%), Positives = 175/235 (74%), Gaps = 12/235 (5%)
Frame = +1
Query: 115 MAAMQYPGAAAMMMMQQQQMMMYPH-QYVPYNYQQQQQHPHFQYASYQQQHKTHER---- 279
MAAMQ AAAM MMQQQQMMMYPH QY PYN QQHP FQYA+YQQQ + H +
Sbjct: 49 MAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQ 108
Query: 280 ----GSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFL 447
GDDVKTLW+GDLL+WMDETYLH CFSHT EVSSVKVIRNK TCQSEGYGFVEFL
Sbjct: 109 PRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFL 168
Query: 448 SGATAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTL 627
S + AEE LQ+F+G MPN+EQ FRLNWASFSTGEKRA ENGP+LSIFVGDL+PDV+D +
Sbjct: 169 SRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAV 228
Query: 628 LQELFVERYPSVKSAKVVIDSTPAGLKLW-FC*FGDET-RDQGFDEMM-ELCHSR 783
L E F RYPSVK AKVVIDS K + F FGDE R + EM C SR
Sbjct: 229 LLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSR 283
>TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17426114 FORWARD
Length = 311
Score = 199 bits (505), Expect = 2e-051
Identities = 109/218 (50%), Positives = 143/218 (65%), Gaps = 7/218 (3%)
Frame = +1
Query: 157 MQQQQMMMYPHQ--YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYW 330
M+ ++ PHQ Y P + Q+P+ + +Q + H+ + KT+W+GDL +W
Sbjct: 52 MRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHW 111
Query: 331 MDETYLHNCFS--HTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNFNGSVMPN 504
MDE YL++ F+ E+ SVKVIRNK SEGYGFVEF S A++VL+ FNG+ MPN
Sbjct: 112 MDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPN 171
Query: 505 SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVI 684
++Q FRLNWASFSTGEKR NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+
Sbjct: 172 TDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVL 231
Query: 685 DSTPAGLKLW-FC*FGDET-RDQGFDEMMEL-CHSRCV 789
D+ K + F FGDE R + EM + C SR +
Sbjct: 232 DANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAM 269
>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD
Length = 433
Score = 199 bits (505), Expect = 2e-051
Identities = 109/218 (50%), Positives = 143/218 (65%), Gaps = 7/218 (3%)
Frame = +1
Query: 157 MQQQQMMMYPHQ--YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYW 330
M+ ++ PHQ Y P + Q+P+ + +Q + H+ + KT+W+GDL +W
Sbjct: 52 MRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHW 111
Query: 331 MDETYLHNCFS--HTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNFNGSVMPN 504
MDE YL++ F+ E+ SVKVIRNK SEGYGFVEF S A++VL+ FNG+ MPN
Sbjct: 112 MDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPN 171
Query: 505 SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVI 684
++Q FRLNWASFSTGEKR NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+
Sbjct: 172 TDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVL 231
Query: 685 DSTPAGLKLW-FC*FGDET-RDQGFDEMMEL-CHSRCV 789
D+ K + F FGDE R + EM + C SR +
Sbjct: 232 DANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAM 269
>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD
Length = 435
Score = 197 bits (499), Expect = 1e-050
Identities = 111/213 (52%), Positives = 140/213 (65%), Gaps = 9/213 (4%)
Frame = +1
Query: 169 QMMMYPHQYVPYN-YQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETY 345
QMM P +P++ Y Q H HF + S +H+ G KT+W+GDL WMDE Y
Sbjct: 62 QMMYAPPPPMPFSPYHQYPNHHHFHHQSRGNKHQNAFNGEN---KTIWVGDLQNWMDEAY 118
Query: 346 LHNCF--SHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNFNGSVMPNSEQLF 519
L++ F + E+ S+KVIRNK SEGYGFVEF S A++VLQ FNG+ MPN++Q F
Sbjct: 119 LNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPF 178
Query: 520 RLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSTPA 699
RLNWASFSTGEKR NGP+LSIFVGDL+PDV+D LL E F E+YPSVK+AKVV+D+
Sbjct: 179 RLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTG 238
Query: 700 GLKLW-FC*FGDET-RDQGFDEMMEL-CHSRCV 789
K + F FGDE R + EM + C SR +
Sbjct: 239 RSKGYGFVRFGDENERTKAMTEMNGVKCSSRAM 271
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 181 bits (458), Expect = 6e-046
Identities = 100/201 (49%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
Frame = +1
Query: 136 GAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIG 315
GA + QQ MM Q QQQ Q +Q + GS DVK+LWIG
Sbjct: 10 GAGQIPSGQQHLWMMMQQQ----QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIG 65
Query: 316 DLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNFNGSV 495
DL WMDE Y+ + F+ +GE +S KVIRNKLT QSEGYGF+EF+S + AE VLQ +NG+
Sbjct: 66 DLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAP 125
Query: 496 MPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAK 675
MP++EQ FRLNWA GEKR GP+ +IFVGDL+P+VTD +L + F Y SVK AK
Sbjct: 126 MPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAK 185
Query: 676 VVIDSTPAGLKLW-FC*FGDE 735
VV+D T K + F F DE
Sbjct: 186 VVLDRTTGRSKGYGFVRFADE 206
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 180 bits (455), Expect = 1e-045
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 5/178 (2%)
Frame = +1
Query: 259 QHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFV 438
Q H + ++V+TLWIGDL YW+DE YL +CFS TGE+ SVKVIRNK+T Q EGYGF+
Sbjct: 11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70
Query: 439 EFLSGATAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVT 618
EF+S A AE LQ +NG+ MP +E FRLNWASF +G+K V+ GP+ SIFVGDL+PDVT
Sbjct: 71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK--VDAGPDHSIFVGDLAPDVT 128
Query: 619 DTLLQELFVERYPSVKSAKVVID-STPAGLKLWFC*FGDET-RDQGFDEMMEL-CHSR 783
D LLQE F Y SV+ AKVV D ST F F +E+ R++ EM L C +R
Sbjct: 129 DYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 186
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 180 bits (455), Expect = 1e-045
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 5/178 (2%)
Frame = +1
Query: 259 QHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFV 438
Q H + ++V+TLWIGDL YW+DE YL +CFS TGE+ SVKVIRNK+T Q EGYGF+
Sbjct: 11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70
Query: 439 EFLSGATAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVT 618
EF+S A AE LQ +NG+ MP +E FRLNWASF +G+K V+ GP+ SIFVGDL+PDVT
Sbjct: 71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK--VDAGPDHSIFVGDLAPDVT 128
Query: 619 DTLLQELFVERYPSVKSAKVVID-STPAGLKLWFC*FGDET-RDQGFDEMMEL-CHSR 783
D LLQE F Y SV+ AKVV D ST F F +E+ R++ EM L C +R
Sbjct: 129 DYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTR 186
>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
chr4:13554983-13557763 REVERSE
Length = 416
Score = 175 bits (442), Expect = 4e-044
Identities = 108/219 (49%), Positives = 131/219 (59%), Gaps = 16/219 (7%)
Frame = +1
Query: 148 MMMMQQQQMMMYP----HQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIG 315
MM QQQQ P Q P + Q QQQ QY Q+ GS ++++LWIG
Sbjct: 34 MMQHQQQQQGQPPAGWNQQSAPSSGQPQQQ----QYGGGGSQNP----GSAGEIRSLWIG 85
Query: 316 DLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNFNGSV 495
DL WMDE YL N F TGE ++ KVIRNK SEGYGF+EF++ ATAE LQ +NG+
Sbjct: 86 DLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAP 145
Query: 496 MPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAK 675
MP+SEQ FRLNWA GE+R E GPE ++FVGDL+PDVTD +L E F Y SVK AK
Sbjct: 146 MPSSEQAFRLNWAQLGAGERRQAE-GPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAK 204
Query: 676 VVIDSTPAGLKLW-FC*FGDETRD-QGFDEMM-ELCHSR 783
VV D T K + F F DE+ + EM + C SR
Sbjct: 205 VVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSR 243
>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917941 FORWARD
Length = 406
Score = 173 bits (438), Expect = 1e-043
Identities = 89/154 (57%), Positives = 112/154 (72%), Gaps = 4/154 (2%)
Frame = +1
Query: 283 SGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATA 462
+ D+++TLWIGDL YWMDE +L+ CF+HTGE+ S KVIRNK T Q EGYGF+EF S A A
Sbjct: 57 TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 116
Query: 463 EEVLQNFNGSVMPN-SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 639
E VLQ FN + +P+ +QLFRLNWAS S+G+KR ++ P+ +IFVGDL+ DVTD +L E
Sbjct: 117 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR--DDSPDYTIFVGDLAADVTDYILLET 174
Query: 640 FVERYPSVKSAKVVIDSTPAGLKLW-FC*FGDET 738
F YPSVK AKVVID K + F F DE+
Sbjct: 175 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917301 FORWARD
Length = 307
Score = 173 bits (438), Expect = 1e-043
Identities = 89/154 (57%), Positives = 112/154 (72%), Gaps = 4/154 (2%)
Frame = +1
Query: 283 SGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATA 462
+ D+++TLWIGDL YWMDE +L+ CF+HTGE+ S KVIRNK T Q EGYGF+EF S A A
Sbjct: 57 TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 116
Query: 463 EEVLQNFNGSVMPN-SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 639
E VLQ FN + +P+ +QLFRLNWAS S+G+KR ++ P+ +IFVGDL+ DVTD +L E
Sbjct: 117 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR--DDSPDYTIFVGDLAADVTDYILLET 174
Query: 640 FVERYPSVKSAKVVIDSTPAGLKLW-FC*FGDET 738
F YPSVK AKVVID K + F F DE+
Sbjct: 175 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 47 bits (111), Expect = 1e-005
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +1
Query: 304 LWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSGATAEEVLQNF 483
L+IG L DE L + FS V+ +V+ NK+T +S GYGFV F+S +A +
Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92
Query: 484 NG 489
NG
Sbjct: 93 NG 94
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,616,286,838
Number of Sequences: 33410
Number of Extensions: 15616286838
Number of Successful Extensions: 498689358
Number of sequences better than 0.0: 0
|
