BLASTX 7.6.2
Query= UN29917 /QuerySize=1173
(1172 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsi... 78 3e-012
gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana] 78 3e-012
gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyra... 74 3e-011
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 78 bits (190), Expect = 3e-012
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = -3
Query: 918 SMATARLTYPPHLLSTPRSSSSPTSIANLRLLPASRFSLRFKSNFFSAETTSVPVPLVFS 739
S ARLT PP LLS PR SPTS+ANLR PA+ FS RF ++ S SVP P+VFS
Sbjct: 4 SSTNARLTNPPRLLSKPR--LSPTSVANLR-FPAADFSTRFFADSSSPRLRSVPFPVVFS 60
Query: 738 DRQRRQRMEPSNAYVS 691
D++RR+ MEPSN YV+
Sbjct: 61 DQRRRRSMEPSNVYVA 76
Score = 60 bits (143), Expect = 8e-007
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -3
Query: 114 VTSSTSEMEIESQEIAKNPSLICAPVMADSVDKMVTET 1
V S+++EMEI S +I KNPSLICAPVMADS+DKMV ET
Sbjct: 75 VASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIET 112
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 78 bits (190), Expect = 3e-012
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = -3
Query: 918 SMATARLTYPPHLLSTPRSSSSPTSIANLRLLPASRFSLRFKSNFFSAETTSVPVPLVFS 739
S ARLT PP LLS PR SPTS+ANLR PA+ FS RF ++ S SVP P+VFS
Sbjct: 4 SSTNARLTNPPRLLSKPR--LSPTSVANLR-FPAADFSTRFFADSSSPRLRSVPFPVVFS 60
Query: 738 DRQRRQRMEPSNAYVS 691
D++RR+ MEPSN YV+
Sbjct: 61 DQRRRRSMEPSNVYVA 76
Score = 60 bits (143), Expect = 8e-007
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = -3
Query: 114 VTSSTSEMEIESQEIAKNPSLICAPVMADSVDKMVTET 1
V S+++EMEI S +I KNPSLICAPVMADS+DKMV ET
Sbjct: 75 VASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIET 112
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 74 bits (181), Expect = 3e-011
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = -3
Query: 918 SMATARLTYPPHLLSTPRSSSSPTSIANLRLLPASRFSLRFKSNFFSAETTSVPVPLVFS 739
S ARLT PPH+LS PR SPTS+ NLR PA+ F +R + S + SVP P+VFS
Sbjct: 4 SSTNARLTNPPHVLSKPR--LSPTSVVNLR-FPAADFPIRLSAGSSSPQLRSVPFPVVFS 60
Query: 738 DRQRRQRMEPSNAYVS 691
DR RR+ ME SN YV+
Sbjct: 61 DRSRRRTMEHSNVYVA 76
Score = 60 bits (145), Expect = 5e-007
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = -3
Query: 114 VTSSTSEMEIESQEIAKNPSLICAPVMADSVDKMVTET 1
V S++++MEI SQ+I KNPSLICAPVMADS+DKMV ET
Sbjct: 75 VASNSTDMEIGSQDIVKNPSLICAPVMADSIDKMVIET 112
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,531,826,676,690
Number of Sequences: 15229318
Number of Extensions: 3531826676690
Number of Successful Extensions: 836928167
Number of sequences better than 0.0: 0
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