BLASTX 7.6.2
Query= UN29978 /QuerySize=706
(705 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G25270.1 | Symbols: | FUNCTIONS IN: molecular... 93 1e-019
TAIR9_protein||AT5G42220.1 | Symbols: | ubiquitin family protei... 48 6e-006
>TAIR9_protein||AT5G25270.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein modification process; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match
is: ubiquitin family protein (TAIR:AT5G42220.1); Has 1533 Blast hits to
627 proteins in 167 species: Archae - 0; Bacteria - 307; Metazoa - 363;
Fungi - 153; Plants - 33; Viruses - 41; Other Eukaryotes - 636 (source:
NCBI BLink). | chr5:8757577-8762002 REVERSE
Length = 659
Score = 93 bits (230), Expect = 1e-019
Identities = 48/63 (76%), Positives = 52/63 (82%), Gaps = 6/63 (9%)
Frame = +2
Query: 266 NGNDEVM------ASAMVEINIKTLDSQTHPLRVDKCVPVPVLKEQIASVTGVVTEQQRL 427
NG DE+M A AMVEI IKTLDSQT+ LRVDKCVPVP LKEQ+ASVTGVVTEQQRL
Sbjct: 4 NGKDEIMVEASQCAGAMVEIKIKTLDSQTYTLRVDKCVPVPALKEQVASVTGVVTEQQRL 63
Query: 428 ICQ 436
IC+
Sbjct: 64 ICR 66
>TAIR9_protein||AT5G42220.1 | Symbols: | ubiquitin family protein |
chr5:16872962-16877455 FORWARD
Length = 880
Score = 48 bits (112), Expect = 6e-006
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2
Query: 278 EVMASAMVEINIKTLDSQTHPLRVDKCVPVPVLKEQIASVTGVVTEQQRLI 430
E + +E+NIKTLDS+T+ +V+K V + KE+IAS TGV QQRLI
Sbjct: 17 EKTPESTLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLI 67
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,657,438,547
Number of Sequences: 33410
Number of Extensions: 15657438547
Number of Successful Extensions: 498721728
Number of sequences better than 0.0: 0
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