BLASTX 7.6.2
Query= UN30106 /QuerySize=1249
(1248 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G18600.1 | Symbols: ATRBL12, RBL12 | RBL12 (AR... 505 3e-143
TAIR9_protein||AT1G74130.2 | Symbols: | rhomboid family protein... 233 2e-061
TAIR9_protein||AT1G74130.1 | Symbols: | rhomboid family protein... 233 2e-061
TAIR9_protein||AT1G74140.5 | Symbols: | FUNCTIONS IN: molecular... 222 4e-058
TAIR9_protein||AT1G74140.1 | Symbols: | FUNCTIONS IN: molecular... 220 3e-057
TAIR9_protein||AT1G74140.4 | Symbols: | FUNCTIONS IN: molecular... 219 4e-057
TAIR9_protein||AT1G74140.3 | Symbols: | FUNCTIONS IN: molecular... 128 1e-029
TAIR9_protein||AT1G74140.2 | Symbols: | FUNCTIONS IN: molecular... 125 7e-029
>TAIR9_protein||AT1G18600.1 | Symbols: ATRBL12, RBL12 | RBL12 (ARABIDOPSIS
RHOMBOID-LIKE PROTEIN 12) | chr1:6400647-6402587 FORWARD
Length = 337
Score = 505 bits (1299), Expect = 3e-143
Identities = 259/311 (83%), Positives = 279/311 (89%), Gaps = 8/311 (2%)
Frame = +2
Query: 14 MNSIFSRRVVVDSSSRLTKLLVNPAAHSHTPNHHSSFTSIYRPSQTRHFRTRYLPSTPSP 193
M +IF+RRVVVDSSSRLTKLL NP HSH + +FTS+Y+P+Q+RHFRT YLPS+PS
Sbjct: 1 MKAIFNRRVVVDSSSRLTKLLANPTTHSHL--NRQTFTSLYKPNQSRHFRTHYLPSSPS- 57
Query: 194 PPPPASRCFDPSLLWRSEKIRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPGKGFEFGG 373
PP SR FDPS LWRSEKIRGFFA AL NK+VKLGNLVES+V F SQFP KGFEF
Sbjct: 58 -SPPVSR-FDPSQLWRSEKIRGFFASAL-GNKAVKLGNLVESRVGFIGSQFPKKGFEFQR 114
Query: 374 YSG--RRGWKNWLQGLSSNDVVLGLLLANAGVFLMWRVFDQRFMMNNFMISLDNFTSGRL 547
+SG RRGWK+WLQGLS DVVLGL++ANAGVF+MWRVF+Q+FMMNNFMISLDNF SGRL
Sbjct: 115 FSGFQRRGWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRL 174
Query: 548 HTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYFAGALGGSVFYLIHHAY 727
HTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLY AGALGGSVFYLIHHAY
Sbjct: 175 HTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAY 234
Query: 728 LAASSPKGHGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIF 907
+AA+SPKG GAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIF
Sbjct: 235 MAATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIF 294
Query: 908 LIGKDILRITE 940
LIGKDILRITE
Sbjct: 295 LIGKDILRITE 305
Score = 57 bits (137), Expect = 2e-008
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 939 SNISGSAHLGGAAVAAIAWAGIRRGRFRF* 1028
SNISGSAHLGGAAVAAIAWA IR+GRFRF*
Sbjct: 308 SNISGSAHLGGAAVAAIAWARIRKGRFRF* 337
>TAIR9_protein||AT1G74130.2 | Symbols: | rhomboid family protein |
chr1:27873687-27875817 FORWARD
Length = 297
Score = 233 bits (594), Expect = 2e-061
Identities = 131/273 (47%), Positives = 179/273 (65%), Gaps = 17/273 (6%)
Frame = +2
Query: 143 SQTRHFRTRYLPSTPSPPPPPASRCFDPSLLWRSEKIRGFFAGAL-TKNKSVKLGNLVES 319
SQ+RH + LP S SR P ++ RS ++ GFFAG L N +K GN++ES
Sbjct: 27 SQSRHSLSHLLPFDLS------SRFVPPYVVSRSARVHGFFAGKLGNTNLKLKFGNVMES 80
Query: 320 KVVFFRSQFPGKGFEFGGYSG--RRGWKNWLQGLSSNDVVLGLLLANAGVFLMWRVF--D 487
+ FF S+ P GFE GG++G +RGWK+W+ G +N VV GL++ANA VF MWRV D
Sbjct: 81 RAGFFSSELPSHGFESGGFTGFQKRGWKSWING--ANGVVFGLVIANAAVFTMWRVLGKD 138
Query: 488 QRFMMNNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLL 667
+M+ NFM+S +F +GR+HTLITS FSH+ HI+ NM+GL +FG IAR+FGP++LL
Sbjct: 139 NMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHIILNMMGLCYFGARIARSFGPRYLL 198
Query: 668 KLYFAGALGGSVFYLIHHAYLAASSPKGHGAFVRDPSRTP--GLGASGAVNAIMLLDIFL 841
KLYFAGALGGSVF+L HA L+ S KG +D + P LGA+G V AI LLD+ L
Sbjct: 199 KLYFAGALGGSVFFLSSHA-LSVISLKGQRVVPKDQLKVPIGKLGANGPVYAITLLDMLL 257
Query: 842 HPRATLYLEFFIPVPAMLLGIFLIGKDILRITE 940
+P+ T Y + VP + GI+ +G +I+++ E
Sbjct: 258 YPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLE 289
>TAIR9_protein||AT1G74130.1 | Symbols: | rhomboid family protein |
chr1:27873687-27875897 FORWARD
Length = 323
Score = 233 bits (594), Expect = 2e-061
Identities = 131/273 (47%), Positives = 179/273 (65%), Gaps = 17/273 (6%)
Frame = +2
Query: 143 SQTRHFRTRYLPSTPSPPPPPASRCFDPSLLWRSEKIRGFFAGAL-TKNKSVKLGNLVES 319
SQ+RH + LP S SR P ++ RS ++ GFFAG L N +K GN++ES
Sbjct: 27 SQSRHSLSHLLPFDLS------SRFVPPYVVSRSARVHGFFAGKLGNTNLKLKFGNVMES 80
Query: 320 KVVFFRSQFPGKGFEFGGYSG--RRGWKNWLQGLSSNDVVLGLLLANAGVFLMWRVF--D 487
+ FF S+ P GFE GG++G +RGWK+W+ G +N VV GL++ANA VF MWRV D
Sbjct: 81 RAGFFSSELPSHGFESGGFTGFQKRGWKSWING--ANGVVFGLVIANAAVFTMWRVLGKD 138
Query: 488 QRFMMNNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLL 667
+M+ NFM+S +F +GR+HTLITS FSH+ HI+ NM+GL +FG IAR+FGP++LL
Sbjct: 139 NMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHIILNMMGLCYFGARIARSFGPRYLL 198
Query: 668 KLYFAGALGGSVFYLIHHAYLAASSPKGHGAFVRDPSRTP--GLGASGAVNAIMLLDIFL 841
KLYFAGALGGSVF+L HA L+ S KG +D + P LGA+G V AI LLD+ L
Sbjct: 199 KLYFAGALGGSVFFLSSHA-LSVISLKGQRVVPKDQLKVPIGKLGANGPVYAITLLDMLL 257
Query: 842 HPRATLYLEFFIPVPAMLLGIFLIGKDILRITE 940
+P+ T Y + VP + GI+ +G +I+++ E
Sbjct: 258 YPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLE 289
>TAIR9_protein||AT1G74140.5 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54,
rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match
is: rhomboid family protein (TAIR:AT1G74130.1); Has 536 Blast hits to
536 proteins in 206 species: Archae - 2; Bacteria - 298; Metazoa - 30;
Fungi - 50; Plants - 36; Viruses - 0; Other Eukaryotes - 120 (source:
NCBI BLink). | chr1:27876928-27879584 FORWARD
Length = 321
Score = 222 bits (565), Expect = 4e-058
Identities = 135/300 (45%), Positives = 182/300 (60%), Gaps = 30/300 (10%)
Frame = +2
Query: 68 KLLVNPAAHSHTPNHHSSFTSIY--RPSQTRHFRTRYLPSTPSPPPPPASRCFDPSLLWR 241
K++VN A S S T + +P+Q+RH L S S P F PS + R
Sbjct: 11 KVVVNVGASS-----QSQLTKMVKKKPNQSRHLLPSRLSSPSSVPH------FVPSAVSR 59
Query: 242 SEKIRGFFAGAL-TKNKSVKLGNLVESKVVFFRSQFPGKGFEFGGYSG--RRGWKNWLQG 412
S K+ GFFA L N +K GN++ES+ FF S+ P GFE GG++G +RGWK+W+ G
Sbjct: 60 SAKVHGFFASKLGNTNLKLKFGNVMESRAGFFSSELPSHGFESGGFTGFQKRGWKSWING 119
Query: 413 LSSNDVVLGLLLANAGVFLMWRVFDQRFMMNNFMISLDNFTSGRLHTLITSAFSHIDIGH 592
+N VV GL++ANA VF MWRV D+ +M++ + +FTSG +HTLITS FSHI
Sbjct: 120 --ANGVVFGLVIANAAVFTMWRVSDRSWMLSTY-----SFTSGYIHTLITSGFSHIGTSQ 172
Query: 593 IVSNMIGLYFFGTSIARNFGPQFLLKLYFAGALGGSVFYLIHHAYLAASSPKGHGAFVRD 772
I+ NMIG+ +FG+ IAR GP +LLKLYFAGALGGSV +L +HA LA + KG G ++D
Sbjct: 173 IILNMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLA--TLKGEGVVIKD 230
Query: 773 PSRTPG----LGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITE 940
T LGA G++ AI LLD+F++P+ T Y + V M I +G +IL I E
Sbjct: 231 HQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHVM-FRIINLGVEILNIPE 289
>TAIR9_protein||AT1G74140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54,
rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match
is: rhomboid family protein (TAIR:AT1G74130.1); Has 484 Blast hits to
484 proteins in 189 species: Archae - 2; Bacteria - 267; Metazoa - 30;
Fungi - 47; Plants - 36; Viruses - 0; Other Eukaryotes - 102 (source:
NCBI BLink). | chr1:27876928-27879584 FORWARD
Length = 318
Score = 220 bits (558), Expect = 3e-057
Identities = 134/300 (44%), Positives = 181/300 (60%), Gaps = 33/300 (11%)
Frame = +2
Query: 68 KLLVNPAAHSHTPNHHSSFTSIY--RPSQTRHFRTRYLPSTPSPPPPPASRCFDPSLLWR 241
K++VN A S S T + +P+Q+RH L S S P F PS + R
Sbjct: 11 KVVVNVGASS-----QSQLTKMVKKKPNQSRHLLPSRLSSPSSVPH------FVPSAVSR 59
Query: 242 SEKIRGFFAGAL-TKNKSVKLGNLVESKVVFFRSQFPGKGFEFGGYSG--RRGWKNWLQG 412
S K+ GFFA L N +K GN++ES+ FF S+ P GFE GG++G +RGWK+W+ G
Sbjct: 60 SAKVHGFFASKLGNTNLKLKFGNVMESRAGFFSSELPSHGFESGGFTGFQKRGWKSWING 119
Query: 413 LSSNDVVLGLLLANAGVFLMWRVFDQRFMMNNFMISLDNFTSGRLHTLITSAFSHIDIGH 592
+N VV GL++ANA VF MWRV D+ +M++ + +FTSG +HTLITS FSHI
Sbjct: 120 --ANGVVFGLVIANAAVFTMWRVSDRSWMLSTY-----SFTSGYIHTLITSGFSHIGTSQ 172
Query: 593 IVSNMIGLYFFGTSIARNFGPQFLLKLYFAGALGGSVFYLIHHAYLAASSPKGHGAFVRD 772
I+ NMIG+ +FG+ IAR GP +LLKLYFAGALGGSV +L +HA LA + KG G ++D
Sbjct: 173 IILNMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLA--TLKGEGVVIKD 230
Query: 773 PSRTPG----LGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITE 940
T LGA G++ AI LLD+F++P+ T Y + V I +G +IL I E
Sbjct: 231 HQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHR----IINLGVEILNIPE 286
>TAIR9_protein||AT1G74140.4 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54,
rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match
is: rhomboid family protein (TAIR:AT1G74130.1); Has 394 Blast hits to
394 proteins in 153 species: Archae - 6; Bacteria - 196; Metazoa - 30;
Fungi - 47; Plants - 36; Viruses - 0; Other Eukaryotes - 79 (source:
NCBI BLink). | chr1:27876928-27879584 FORWARD
Length = 307
Score = 219 bits (556), Expect = 4e-057
Identities = 130/287 (45%), Positives = 175/287 (60%), Gaps = 29/287 (10%)
Frame = +2
Query: 68 KLLVNPAAHSHTPNHHSSFTSIY--RPSQTRHFRTRYLPSTPSPPPPPASRCFDPSLLWR 241
K++VN A S S T + +P+Q+RH L S S P F PS + R
Sbjct: 11 KVVVNVGASS-----QSQLTKMVKKKPNQSRHLLPSRLSSPSSVPH------FVPSAVSR 59
Query: 242 SEKIRGFFAGAL-TKNKSVKLGNLVESKVVFFRSQFPGKGFEFGGYSG--RRGWKNWLQG 412
S K+ GFFA L N +K GN++ES+ FF S+ P GFE GG++G +RGWK+W+ G
Sbjct: 60 SAKVHGFFASKLGNTNLKLKFGNVMESRAGFFSSELPSHGFESGGFTGFQKRGWKSWING 119
Query: 413 LSSNDVVLGLLLANAGVFLMWRVFDQRFMMNNFMISLDNFTSGRLHTLITSAFSHIDIGH 592
+N VV GL++ANA VF MWRV D+ +M++ + +FTSG +HTLITS FSHI
Sbjct: 120 --ANGVVFGLVIANAAVFTMWRVSDRSWMLSTY-----SFTSGYIHTLITSGFSHIGTSQ 172
Query: 593 IVSNMIGLYFFGTSIARNFGPQFLLKLYFAGALGGSVFYLIHHAYLAASSPKGHGAFVRD 772
I+ NMIG+ +FG+ IAR GP +LLKLYFAGALGGSV +L +HA LA + KG G ++D
Sbjct: 173 IILNMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLA--TLKGEGVVIKD 230
Query: 773 PSRTPG----LGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLG 901
T LGA G++ AI LLD+F++P+ T Y + V M G
Sbjct: 231 HQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHVMFGG 277
>TAIR9_protein||AT1G74140.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54,
rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match
is: rhomboid family protein (TAIR:AT1G74130.1); Has 428 Blast hits to
428 proteins in 155 species: Archae - 4; Bacteria - 272; Metazoa - 0;
Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 112 (source:
NCBI BLink). | chr1:27876928-27879584 FORWARD
Length = 302
Score = 128 bits (320), Expect = 1e-029
Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 7/147 (4%)
Frame = +2
Query: 512 MISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYFAGAL 691
++S +FTSG +HTLITS FSHI I+ NMIG+ +FG+ IAR GP +LLKLYFAGAL
Sbjct: 127 LLSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGAL 186
Query: 692 GGSVFYLIHHAYLAASSPKGHGAFVRDPSRTPG----LGASGAVNAIMLLDIFLHPRATL 859
GGSV +L +HA LA + KG G ++D T LGA G++ AI LLD+F++P+ T
Sbjct: 187 GGSVCFLSYHALLA--TLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTT 244
Query: 860 YLEFFIPVPAMLLGIFLIGKDILRITE 940
Y + V M I +G +IL I E
Sbjct: 245 YFALMLRVHVM-FRIINLGVEILNIPE 270
>TAIR9_protein||AT1G74140.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase S54,
rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match
is: rhomboid family protein (TAIR:AT1G74130.1); Has 388 Blast hits to
388 proteins in 139 species: Archae - 2; Bacteria - 244; Metazoa - 0;
Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 104 (source:
NCBI BLink). | chr1:27876928-27879584 FORWARD
Length = 299
Score = 125 bits (313), Expect = 7e-029
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 10/147 (6%)
Frame = +2
Query: 512 MISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYFAGAL 691
++S +FTSG +HTLITS FSHI I+ NMIG+ +FG+ IAR GP +LLKLYFAGAL
Sbjct: 127 LLSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGAL 186
Query: 692 GGSVFYLIHHAYLAASSPKGHGAFVRDPSRTPG----LGASGAVNAIMLLDIFLHPRATL 859
GGSV +L +HA LA + KG G ++D T LGA G++ AI LLD+F++P+ T
Sbjct: 187 GGSVCFLSYHALLA--TLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTT 244
Query: 860 YLEFFIPVPAMLLGIFLIGKDILRITE 940
Y + V I +G +IL I E
Sbjct: 245 YFALMLRVHR----IINLGVEILNIPE 267
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,698,578,454
Number of Sequences: 33410
Number of Extensions: 15698578454
Number of Successful Extensions: 498744224
Number of sequences better than 0.0: 0
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