BLASTX 7.6.2
Query= UN30247 /QuerySize=913
(912 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54130.1 | Symbols: RSH3, AT-RSH3, ATRSH3 | RS... 364 6e-101
TAIR9_protein||AT3G14050.1 | Symbols: RSH2, AT-RSH2, ATRSH2 | RS... 268 5e-072
TAIR9_protein||AT4G02260.3 | Symbols: RSH1, AT-RSH1 | RSH1 (RELA... 96 4e-020
TAIR9_protein||AT4G02260.2 | Symbols: RSH1, AT-RSH1 | RSH1 (RELA... 96 4e-020
TAIR9_protein||AT4G02260.1 | Symbols: RSH1, AT-RSH1, ATRSH1 | RS... 96 4e-020
>TAIR9_protein||AT1G54130.1 | Symbols: RSH3, AT-RSH3, ATRSH3 | RSH3 (RELA/SPOT
HOMOLOG 3); GTP diphosphokinase | chr1:20211177-20213761 FORWARD
Length = 716
Score = 364 bits (933), Expect = 6e-101
Identities = 191/230 (83%), Positives = 205/230 (89%), Gaps = 10/230 (4%)
Frame = +2
Query: 233 SNNNSPPVRTFN----VGGSCLRAGSTRLFNGFIRKAVGSCVDYYETDSVLLDEQLPFPM 400
S+ NSPP+R GGS LR GS+RLFNGF+RKA+GSCVD Y+TDSVL+DEQLPF M
Sbjct: 125 SSGNSPPMRISRDRNLDGGSALRVGSSRLFNGFVRKAIGSCVD-YDTDSVLVDEQLPFTM 183
Query: 401 DDDDDKGGGGERRQPYARDLLRRAQLKHRIFEDDESVIKAFYEAEKAHRGQMGANGDPYL 580
DD G GERRQPYARDLLRRAQLKH+IFE DESVIKAFYEAEKAHRGQM A GDPYL
Sbjct: 184 DD----GFEGERRQPYARDLLRRAQLKHKIFE-DESVIKAFYEAEKAHRGQMRATGDPYL 238
Query: 581 QHCVEAAILLADIGANSTVVIAGLLHDTLDDSFMSYDYILTTFGSGVADLVQRVSKLSQL 760
QHCVE A+LLADIGANSTVV+AG+LHDTLDDSFMSYDYIL TFGSGVADLV+ VSKLSQL
Sbjct: 239 QHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLVEGVSKLSQL 298
Query: 761 SKLARENNTACKTVEADRLHTMFLAIADARAVLIKLADRLHNMVTLYALP 910
SKLARENNTACKTVEADRLHTMFLA+ADARAVLIKLADRLHNM+TLYALP
Sbjct: 299 SKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALP 348
Score = 80 bits (195), Expect = 2e-015
Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 11/81 (13%)
Frame = +3
Query: 6 IGGLSLLFKSS---PSSSSFASHPTVVGDELPSI---RTEDHHRAGSFSYSPTKFITSSS 167
IGGLSLLF + SSSS +SHP+ VG+EL SI R+ED +GSF YSP+KFI S
Sbjct: 50 IGGLSLLFSGASVKSSSSSSSSHPS-VGEELASIRHDRSEDRTLSGSFCYSPSKFI--GS 106
Query: 168 SYLKRDNHHQSPVSVLHGPKS 230
SYLKRD HQSPVSVLHGP S
Sbjct: 107 SYLKRD--HQSPVSVLHGPIS 125
>TAIR9_protein||AT3G14050.1 | Symbols: RSH2, AT-RSH2, ATRSH2 | RSH2 (RELA-SPOT
HOMOLOG 2); GTP diphosphokinase | chr3:4650902-4653514 REVERSE
Length = 710
Score = 268 bits (683), Expect = 5e-072
Identities = 136/156 (87%), Positives = 148/156 (94%), Gaps = 1/156 (0%)
Frame = +2
Query: 440 QPYARDLLRRAQLKHRIFEDDESVIKAFYEAEKAHRGQMGANGDPYLQHCVEAAILLADI 619
+PYARDLLRRAQL+H+IF +DESVIKAFYEAEKAHRGQM A+ DPYLQHCVE A+LLA+I
Sbjct: 189 KPYARDLLRRAQLRHKIF-NDESVIKAFYEAEKAHRGQMRASRDPYLQHCVETAMLLANI 247
Query: 620 GANSTVVIAGLLHDTLDDSFMSYDYILTTFGSGVADLVQRVSKLSQLSKLARENNTACKT 799
GANSTVV+AGLLHDT+DDSFMSYDYIL FG+GVADLV+ VSKLSQLSKLARENNTACKT
Sbjct: 248 GANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLVEGVSKLSQLSKLARENNTACKT 307
Query: 800 VEADRLHTMFLAIADARAVLIKLADRLHNMVTLYAL 907
VEADRLHTMFLA+ADARAVLIKLADRLHNM TLYAL
Sbjct: 308 VEADRLHTMFLAMADARAVLIKLADRLHNMKTLYAL 343
Score = 58 bits (138), Expect = 8e-009
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Frame = +2
Query: 245 SPPVRTF---NVGGSCLRAGSTRLFNGFIRKAVGSCVDY-YETDSVLLDEQLPFPMDDDD 412
SPP+R N+ GS R G++ LFNGF+RKA+GSCVDY + +DSVL+DE L FPM+ D
Sbjct: 130 SPPMRMSRDRNLDGS-FRLGASGLFNGFVRKALGSCVDYEFGSDSVLVDE-LTFPMEVDT 187
Query: 413 DK 418
K
Sbjct: 188 IK 189
Score = 54 bits (128), Expect = 1e-007
Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 16/83 (19%)
Frame = +3
Query: 9 GGLSLLFKSS---PSSSSFASHPTVVGDELPSIR------TEDHHRAGSFSYSPTKFITS 161
GGLS LF S+ SSSS S+ T V DE S+R +D + SF YSP KF+ S
Sbjct: 51 GGLSSLFSSASVKSSSSSSCSYSTGV-DEFSSLRYDRSDDLKDLSFSSSFGYSPAKFVNS 109
Query: 162 SSSYLKRDNHHQSPVSVLHGPKS 230
+RD HQSP+SVLHGP S
Sbjct: 110 ----FRRD--HQSPISVLHGPVS 126
>TAIR9_protein||AT4G02260.3 | Symbols: RSH1, AT-RSH1 | RSH1 (RELA-SPOT HOMOLOG
1); catalytic | chr4:985451-990697 FORWARD
Length = 817
Score = 96 bits (236), Expect = 4e-020
Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 3/139 (2%)
Frame = +2
Query: 503 ESVIKAFYEAEKAHRGQMGANGDPYLQHCVEAAILLADIGANSTVVIAGLLHDTLDD-SF 679
E V K A +AH GQ +G+P++ H V A +L ++ + ++AGLLHDT++D +F
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNF 207
Query: 680 MSYDYILTTFGSGVADLVQRVSKLSQLSKL-ARENNTACKTVEADRLHTMFLAIAD-ARA 853
++++ I FG+ V +V+ +K+S+L KL + + + V+AD L MFLA+ D R
Sbjct: 208 ITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRV 267
Query: 854 VLIKLADRLHNMVTLYALP 910
+++KLADRLHNM TL +P
Sbjct: 268 IIVKLADRLHNMRTLCHMP 286
>TAIR9_protein||AT4G02260.2 | Symbols: RSH1, AT-RSH1 | RSH1 (RELA-SPOT HOMOLOG
1); catalytic | chr4:985451-991178 FORWARD
Length = 884
Score = 96 bits (236), Expect = 4e-020
Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 3/139 (2%)
Frame = +2
Query: 503 ESVIKAFYEAEKAHRGQMGANGDPYLQHCVEAAILLADIGANSTVVIAGLLHDTLDD-SF 679
E V K A +AH GQ +G+P++ H V A +L ++ + ++AGLLHDT++D +F
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNF 207
Query: 680 MSYDYILTTFGSGVADLVQRVSKLSQLSKL-ARENNTACKTVEADRLHTMFLAIAD-ARA 853
++++ I FG+ V +V+ +K+S+L KL + + + V+AD L MFLA+ D R
Sbjct: 208 ITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRV 267
Query: 854 VLIKLADRLHNMVTLYALP 910
+++KLADRLHNM TL +P
Sbjct: 268 IIVKLADRLHNMRTLCHMP 286
>TAIR9_protein||AT4G02260.1 | Symbols: RSH1, AT-RSH1, ATRSH1 | RSH1 (RELA-SPOT
HOMOLOG 1); catalytic | chr4:985451-991178 FORWARD
Length = 885
Score = 96 bits (236), Expect = 4e-020
Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 3/139 (2%)
Frame = +2
Query: 503 ESVIKAFYEAEKAHRGQMGANGDPYLQHCVEAAILLADIGANSTVVIAGLLHDTLDD-SF 679
E V K A +AH GQ +G+P++ H V A +L ++ + ++AGLLHDT++D +F
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNF 207
Query: 680 MSYDYILTTFGSGVADLVQRVSKLSQLSKL-ARENNTACKTVEADRLHTMFLAIAD-ARA 853
++++ I FG+ V +V+ +K+S+L KL + + + V+AD L MFLA+ D R
Sbjct: 208 ITFEKIEEEFGATVRHIVEGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRV 267
Query: 854 VLIKLADRLHNMVTLYALP 910
+++KLADRLHNM TL +P
Sbjct: 268 IIVKLADRLHNMRTLCHMP 286
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,785,648,113
Number of Sequences: 33410
Number of Extensions: 15785648113
Number of Successful Extensions: 504134102
Number of sequences better than 0.0: 0
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