Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN30428


BLASTX 7.6.2

Query= UN30428 /QuerySize=1317
        (1316 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|312283423|dbj|BAJ34577.1| unnamed protein product [Thellungie...     75   2e-011
gi|116791645|gb|ABK26054.1| unknown [Picea sitchensis]                  74   5e-011
gi|224095698|ref|XP_002310440.1| predicted protein [Populus tric...     72   1e-010
gi|7801688|emb|CAB91608.1| farnesyltransferase subunit A (FTA) [...     72   2e-010
gi|18411158|ref|NP_567084.1| farnesyltransferase A [Arabidopsis ...     72   2e-010
gi|3142698|gb|AAC61853.1| protein farnesyltransferase subunit A ...     72   2e-010
gi|110736120|dbj|BAF00032.1| protein farnesyltransferase subunit...     72   2e-010
gi|297817234|ref|XP_002876500.1| protein farnesyltransferase sub...     72   2e-010
gi|255587054|ref|XP_002534116.1| protein farnesyltransferase alp...     70   5e-010
gi|147805786|emb|CAN69481.1| hypothetical protein VITISV_017351 ...     68   3e-009
gi|225433858|ref|XP_002264387.1| PREDICTED: hypothetical protein...     68   3e-009
gi|326501320|dbj|BAJ98891.1| predicted protein [Hordeum vulgare ...     68   3e-009
gi|115480131|ref|NP_001063659.1| Os09g0514400 [Oryza sativa Japo...     68   4e-009
gi|12230437|sp|P93227.1|FNTA_SOLLC RecName: Full=Protein farnesy...     67   5e-009
gi|255641545|gb|ACU21046.1| unknown [Glycine max]                       67   5e-009
gi|255644505|gb|ACU22756.1| unknown [Glycine max]                       67   5e-009
gi|255647234|gb|ACU24085.1| unknown [Glycine max]                       67   5e-009
gi|33327040|gb|AAQ08894.1| farnesyltransferase/type I geranylger...     67   8e-009
gi|226498562|ref|NP_001141523.1| hypothetical protein LOC1002736...     66   1e-008
gi|194704924|gb|ACF86546.1| unknown [Zea mays]                          66   1e-008

>gi|312283423|dbj|BAJ34577.1| unnamed protein product [Thellungiella halophila]

          Length = 325

 Score =  75 bits (184), Expect = 2e-011
 Identities = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWENELDYC ELLEADVFNNS WNQ
Sbjct:  149 SHRQWTLQALGGWENELDYCHELLEADVFNNSAWNQ 184

>gi|116791645|gb|ABK26054.1| unknown [Picea sitchensis]

          Length = 332

 Score =  74 bits (180), Expect = 5e-011
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR WALQALGGWENEL+YC+ELLE D+FNNS WNQ
Sbjct:  156 SHRQWALQALGGWENELEYCRELLEVDIFNNSAWNQ 191

>gi|224095698|ref|XP_002310440.1| predicted protein [Populus trichocarpa]

          Length = 330

 Score =  72 bits (176), Expect = 1e-010
 Identities = 30/36 (83%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWENELDYC +LLE DVFNNS WNQ
Sbjct:  150 SHRQWVLQALGGWENELDYCHQLLEKDVFNNSAWNQ 185

>gi|7801688|emb|CAB91608.1| farnesyltransferase subunit A (FTA) [Arabidopsis
        thaliana]

          Length = 340

 Score =  72 bits (175), Expect = 2e-010
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W L+ALGGWE+ELDYC ELLEADVFNNS WNQ
Sbjct:  163 SHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 198

>gi|18411158|ref|NP_567084.1| farnesyltransferase A [Arabidopsis thaliana]

          Length = 326

 Score =  72 bits (175), Expect = 2e-010
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W L+ALGGWE+ELDYC ELLEADVFNNS WNQ
Sbjct:  149 SHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 184

>gi|3142698|gb|AAC61853.1| protein farnesyltransferase subunit A [Arabidopsis
        thaliana]

          Length = 326

 Score =  72 bits (175), Expect = 2e-010
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W L+ALGGWE+ELDYC ELLEADVFNNS WNQ
Sbjct:  149 SHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 184

>gi|110736120|dbj|BAF00032.1| protein farnesyltransferase subunit A [Arabidopsis
        thaliana]

          Length = 230

 Score =  72 bits (175), Expect = 2e-010
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W L+ALGGWE+ELDYC ELLEADVFNNS WNQ
Sbjct:   53 SHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 88

>gi|297817234|ref|XP_002876500.1| protein farnesyltransferase subunit A
        [Arabidopsis lyrata subsp. lyrata]

          Length = 326

 Score =  72 bits (175), Expect = 2e-010
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W L+ALGGWE+ELDYC ELLEADVFNNS WNQ
Sbjct:  149 SHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 184

>gi|255587054|ref|XP_002534116.1| protein farnesyltransferase alpha subunit,
        putative [Ricinus communis]

          Length = 333

 Score =  70 bits (171), Expect = 5e-010
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+ELDYC++LLE DVFNNS WNQ
Sbjct:  155 SHRQWVLQALGGWEDELDYCRQLLEHDVFNNSAWNQ 190

>gi|147805786|emb|CAN69481.1| hypothetical protein VITISV_017351 [Vitis
        vinifera]

          Length = 362

 Score =  68 bits (165), Expect = 3e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQ LGGWE+ELDYC++LLE D+FNNS WNQ
Sbjct:  183 SHRQWVLQELGGWEDELDYCKQLLEDDIFNNSAWNQ 218

>gi|225433858|ref|XP_002264387.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 331

 Score =  68 bits (165), Expect = 3e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQ LGGWE+ELDYC++LLE D+FNNS WNQ
Sbjct:  152 SHRQWVLQELGGWEDELDYCKQLLEDDIFNNSAWNQ 187

>gi|326501320|dbj|BAJ98891.1| predicted protein [Hordeum vulgare subsp.
        vulgare]

          Length = 332

 Score =  68 bits (165), Expect = 3e-009
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+EL YC +LLE DVFNNS WNQ
Sbjct:  156 SHRQWVLQALGGWESELQYCNQLLEEDVFNNSAWNQ 191

>gi|115480131|ref|NP_001063659.1| Os09g0514400 [Oryza sativa Japonica Group]

          Length = 339

 Score =  68 bits (164), Expect = 4e-009
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE EL YC +LLE DVFNNS WNQ
Sbjct:  158 SHRQWVLQALGGWETELQYCNQLLEEDVFNNSAWNQ 193

>gi|12230437|sp|P93227.1|FNTA_SOLLC RecName: Full=Protein
        farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha;
        AltName: Full=CAAX farnesyltransferase subunit alpha; AltName:
        Full=FTase-alpha; AltName: Full=Ras proteins prenyltransferase subunit
        alpha; AltName: Full=Type I protein geranyl-geranyltransferase subunit
        alpha; Short=GGTase-I-alpha

          Length = 346

 Score =  67 bits (163), Expect = 5e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+EL YCQ+LLE D++NNS WNQ
Sbjct:  153 SHRQWVLQALGGWEDELAYCQQLLEDDIYNNSAWNQ 188

>gi|255641545|gb|ACU21046.1| unknown [Glycine max]

          Length = 346

 Score =  67 bits (163), Expect = 5e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR WALQ LGGWE+EL+YC ELL+ D+FNNS WNQ
Sbjct:  157 SHRQWALQTLGGWEDELNYCTELLKEDIFNNSAWNQ 192

>gi|255644505|gb|ACU22756.1| unknown [Glycine max]

          Length = 362

 Score =  67 bits (163), Expect = 5e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+EL+YC ELL+ D+FNNS WNQ
Sbjct:  173 SHRQWVLQALGGWEDELNYCTELLKEDIFNNSAWNQ 208

>gi|255647234|gb|ACU24085.1| unknown [Glycine max]

          Length = 340

 Score =  67 bits (163), Expect = 5e-009
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+EL+YC ELL+ D+FNNS WNQ
Sbjct:  151 SHRQWVLQALGGWEDELNYCTELLKEDIFNNSAWNQ 186

>gi|33327040|gb|AAQ08894.1| farnesyltransferase/type I geranylgeranyltransferase
        alpha subunit [Catharanthus roseus]

          Length = 332

 Score =  67 bits (161), Expect = 8e-009
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE+EL YC +LLE D+FNNS WNQ
Sbjct:  154 SHRQWVLQALGGWEDELAYCHKLLEEDIFNNSAWNQ 189

>gi|226498562|ref|NP_001141523.1| hypothetical protein LOC100273635 [Zea mays]

          Length = 326

 Score =  66 bits (160), Expect = 1e-008
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE EL+YC  LL+ DVFNNS WNQ
Sbjct:  148 SHRQWVLQALGGWETELEYCDHLLKEDVFNNSAWNQ 183

>gi|194704924|gb|ACF86546.1| unknown [Zea mays]

          Length = 193

 Score =  66 bits (160), Expect = 1e-008
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 1157 SHRPWALQALGGWENELDYCQELLEADVFNNSLWNQ 1264
            SHR W LQALGGWE EL+YC  LL+ DVFNNS WNQ
Sbjct:   15 SHRQWVLQALGGWETELEYCDHLLKEDVFNNSAWNQ 50

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,546,758,379,358
Number of Sequences: 15229318
Number of Extensions: 3546758379358
Number of Successful Extensions: 845574274
Number of sequences better than 0.0: 0