BLASTX 7.6.2
Query= UN30429 /QuerySize=1161
(1160 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G45000.1 | Symbols: EMB2766 | EMB2766 (EMBRYO ... 452 3e-127
TAIR9_protein||AT3G10650.1 | Symbols: | FUNCTIONS IN: molecular... 52 5e-007
>TAIR9_protein||AT2G45000.1 | Symbols: EMB2766 | EMB2766 (EMBRYO DEFECTIVE
2766); structural constituent of nuclear pore | chr2:18564156-18567632
FORWARD
Length = 740
Score = 452 bits (1161), Expect = 3e-127
Identities = 244/316 (77%), Positives = 270/316 (85%), Gaps = 11/316 (3%)
Frame = +2
Query: 17 TTTTTTTTTTSFSTPAATSAPSSSAAASTTTFPSFGV--GSSAANTTTATSPAPAFGFTT 190
T TT ++ +FST A S+ A ST +F F V S+ A+++ + +PAF F+
Sbjct: 433 TNTTPASSAATFSTTGFGLASSTPATGSTNSFTGFAVPKTSTPASSSQPQTTSPAFSFSL 492
Query: 191 STSAAATTTFAVPQAASTTATTTQTSLVVASTSGTSTTTVAAPLAGAPKLPSEITGKTVE 370
+S + T A+++ATTTQT+LVV S+SGTS T AP+AG+PKLPSEITGKTVE
Sbjct: 493 PSSTSTTA------PATSSATTTQTTLVVPSSSGTS--TAVAPVAGSPKLPSEITGKTVE 544
Query: 371 EIIKEWNTELEERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLE 550
EIIKEWNTEL+ERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLE
Sbjct: 545 EIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLERQLE 604
Query: 551 LIDTHQQEVDKALKSMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQ 730
LI+THQQEVDKAL+SMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQ
Sbjct: 605 LIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEHMTEQ 664
Query: 731 IRSIIQSVNANQGGELEAVDGMNPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIASQG 910
IRSIIQSVNANQGGELEA+DGM+PLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIA QG
Sbjct: 665 IRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKIALQG 724
Query: 911 SGGDRELMMAPKHWMS 958
SGGDREL MAPKHWMS
Sbjct: 725 SGGDREL-MAPKHWMS 739
Score = 80 bits (197), Expect = 2e-015
Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Frame = +2
Query: 32 TTTTTSFSTPAATSAPSSSAAASTTTFPSFGVGSSAANTTTATSPA----PAFGFTTSTS 199
TTTTTS STPAATSAP+SSA AST FPSFGV SSA NTT A+S A FG +ST
Sbjct: 397 TTTTTSSSTPAATSAPASSAPASTMAFPSFGVTSSATNTTPASSAATFSTTGFGLASSTP 456
Query: 200 AAATTTFAVPQAASTTATTTQTSLVVASTSGTSTTTVAAPLAGAPKLPSEITGKT 364
A +T A T+T +S ++ S + ++ AP S T +T
Sbjct: 457 ATGSTNSFTGFAVPKTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATSSATTTQT 511
Score = 60 bits (145), Expect = 2e-009
Identities = 33/106 (31%), Positives = 61/106 (57%)
Frame = +2
Query: 17 TTTTTTTTTTSFSTPAATSAPSSSAAASTTTFPSFGVGSSAANTTTATSPAPAFGFTTST 196
++T ++TT SF A+++ ++++++ PSFG GSSA+ T +T+P+ FG S+
Sbjct: 57 SSTPASSTTPSFGFGASSTPSFGFGSSASSSTPSFGFGSSASVTPASTTPSFGFGTAASS 116
Query: 197 SAAATTTFAVPQAASTTATTTQTSLVVASTSGTSTTTVAAPLAGAP 334
SA A + F +++A + ++S +ST T ++ L GAP
Sbjct: 117 SAPAPSLFGSSTTNASSAAPGSSPFGFVTSSASSTATPSSSLFGAP 162
>TAIR9_protein||AT3G10650.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: nucleoporin-related (TAIR:AT5G20200.1); Has 51621 Blast hits
to 25162 proteins in 1378 species: Archae - 161; Bacteria - 11485;
Metazoa - 15659; Fungi - 10121; Plants - 1099; Viruses - 600; Other
Eukaryotes - 12496 (source: NCBI BLink). | chr3:3325562-3330819
REVERSE
Length = 1310
Score = 52 bits (124), Expect = 5e-007
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 44 TSFSTPAATSAPSSSAAASTTTFPSFGVGSSAANTTTATSPAPAFGFTTSTSAAATTTFA 223
TS STP +S SS++++ST + P FG A N++ + P + FTTS++ TTF+
Sbjct: 1064 TSVSTPQLSSTNSSASSSSTMSSPLFGTSWQAPNSSPNSGPVFSSSFTTSST---PTTFS 1120
Query: 224 VPQAASTTATTTQTSLVVASTSGTSTTTVAAPLAGAPKLP 343
+++ T ++T T + AST+ T + +P+ G P
Sbjct: 1121 FGGSSAATVSSTTTPIFGASTNNTPS---PSPIFGFGSTP 1157
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,869,515,959
Number of Sequences: 33410
Number of Extensions: 15869515959
Number of Successful Extensions: 504234963
Number of sequences better than 0.0: 0
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