BLASTX 7.6.2
Query= UN30439 /QuerySize=850
(849 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type)... 475 3e-134
TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type)... 475 3e-134
TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic a... 120 1e-027
TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic a... 120 1e-027
TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic a... 74 1e-013
TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / ... 64 1e-010
TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / ... 64 1e-010
TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type)... 61 9e-010
TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (... 59 3e-009
TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / ... 54 1e-007
>TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 475 bits (1220), Expect = 3e-134
Identities = 239/271 (88%), Positives = 255/271 (94%), Gaps = 5/271 (1%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MDGYEATRIVLSRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVI KAKKE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 224 LGLMSCSRPPWS-QEELISPRNNNNRGSSLNPASLPFYANGARSSKEMTNN-EFMDDVNP 397
LGLM+CSR PWS Q+ELISP+ NNRGSSLNPASLPFYANG RSS+++TN+ E MDD+N
Sbjct: 61 LGLMNCSRSPWSHQDELISPK--NNRGSSLNPASLPFYANGGRSSRDLTNDFELMDDMNS 118
Query: 398 RG-DFLGSVHARSGSCVLDGLGYGDSSDLGFGGVPCSYYARGFCKNGSNCRFVHSEGGAE 574
R DFLGSVHARSGSCVLDGLGYG SDLGFGGVPCSY+ARGFCKNG++CRFVHS+GGA+
Sbjct: 119 RSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDGGAD 178
Query: 575 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSPKGVNLQSSDAQRAAAALMMGDELQK 754
LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFS KGVNLQ +D QRAAAALM+GDELQK
Sbjct: 179 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSTKGVNLQQNDVQRAAAALMIGDELQK 238
Query: 755 LGRWRPERIDLSAMACPASRQIYLTFPADSR 847
LGRWRPERIDLSAMACPASRQIYLTFPADSR
Sbjct: 239 LGRWRPERIDLSAMACPASRQIYLTFPADSR 269
>TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 475 bits (1220), Expect = 3e-134
Identities = 239/271 (88%), Positives = 255/271 (94%), Gaps = 5/271 (1%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MDGYEATRIVLSRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVI KAKKE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 224 LGLMSCSRPPWS-QEELISPRNNNNRGSSLNPASLPFYANGARSSKEMTNN-EFMDDVNP 397
LGLM+CSR PWS Q+ELISP+ NNRGSSLNPASLPFYANG RSS+++TN+ E MDD+N
Sbjct: 61 LGLMNCSRSPWSHQDELISPK--NNRGSSLNPASLPFYANGGRSSRDLTNDFELMDDMNS 118
Query: 398 RG-DFLGSVHARSGSCVLDGLGYGDSSDLGFGGVPCSYYARGFCKNGSNCRFVHSEGGAE 574
R DFLGSVHARSGSCVLDGLGYG SDLGFGGVPCSY+ARGFCKNG++CRFVHS+GGA+
Sbjct: 119 RSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDGGAD 178
Query: 575 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSPKGVNLQSSDAQRAAAALMMGDELQK 754
LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFS KGVNLQ +D QRAAAALM+GDELQK
Sbjct: 179 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSTKGVNLQQNDVQRAAAALMIGDELQK 238
Query: 755 LGRWRPERIDLSAMACPASRQIYLTFPADSR 847
LGRWRPERIDLSAMACPASRQIYLTFPADSR
Sbjct: 239 LGRWRPERIDLSAMACPASRQIYLTFPADSR 269
>TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 120 bits (300), Expect = 1e-027
Identities = 66/84 (78%), Positives = 71/84 (84%), Gaps = 5/84 (5%)
Frame = +2
Query: 593 RIELLRSNSVPPRLAHHFMTRSSLPSFSPKGVNLQSSDAQRAAAALMMGDELQKLGRWRP 772
R E+LRSNSVPPRLA+ F + P FSPKGVNLQ S+AQR AAALMMGD+L KLG WRP
Sbjct: 87 RKEVLRSNSVPPRLANQF---TGYP-FSPKGVNLQQSEAQR-AAALMMGDDLHKLGIWRP 141
Query: 773 ERIDLSAMACPASRQIYLTFPADS 844
ERIDLSA ACPASRQIYLTFPADS
Sbjct: 142 ERIDLSATACPASRQIYLTFPADS 165
Score = 106 bits (263), Expect = 2e-023
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MD YEATRIVLSRIQ LDP NASKI+GLLLLQDHGEKEMIRLAFGP+ L+HSVIAKAKK+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 224 L 226
L
Sbjct: 61 L 61
>TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 120 bits (300), Expect = 1e-027
Identities = 66/84 (78%), Positives = 71/84 (84%), Gaps = 5/84 (5%)
Frame = +2
Query: 593 RIELLRSNSVPPRLAHHFMTRSSLPSFSPKGVNLQSSDAQRAAAALMMGDELQKLGRWRP 772
R E+LRSNSVPPRLA+ F + P FSPKGVNLQ S+AQR AAALMMGD+L KLG WRP
Sbjct: 87 RKEVLRSNSVPPRLANQF---TGYP-FSPKGVNLQQSEAQR-AAALMMGDDLHKLGIWRP 141
Query: 773 ERIDLSAMACPASRQIYLTFPADS 844
ERIDLSA ACPASRQIYLTFPADS
Sbjct: 142 ERIDLSATACPASRQIYLTFPADS 165
Score = 106 bits (263), Expect = 2e-023
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MD YEATRIVLSRIQ LDP NASKI+GLLLLQDHGEKEMIRLAFGP+ L+HSVIAKAKK+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 224 L 226
L
Sbjct: 61 L 61
>TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7399162-7401870 FORWARD
Length = 603
Score = 74 bits (180), Expect = 1e-013
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MD + T I+ ++I+TL+P+ ASKI+G LLLQD G+ +++RLA GPETL+ SV KAK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 224 LGLMSCSRPPWSQEELISPRNNNNRGSSLNPASLPFYANGARSSKEMTNNEFM--DDVNP 397
LGL S S SP N +R +++ SL + G S+ + F +
Sbjct: 61 LGLSSNGSSSAS-----SPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFATPGSLGS 115
Query: 398 RGDFLGS-VHARSGSCVLDGLGYGDSSDLG 484
+ + S A S DG GDS+ G
Sbjct: 116 NPNMISSPFQASSSLFASDGAAAGDSTGNG 145
>TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19108533 FORWARD
Length = 415
Score = 64 bits (154), Expect = 1e-010
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MD + T I+ S+I+T + ENAS+++ LLQD ++++IR+AFGP++L+ + KAK +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 224 LGLMS--CSRPPWSQEELI---SPRN---NNNRGSSLNPASLPFYANGARSSKEMTNN 373
LG S SRP + + SPRN +R S NP S N R +K N+
Sbjct: 61 LGFSSNGFSRPINIHGQSLSSSSPRNGFLEFSRNPS-NPLSSSLTLNTLRDNKPNFNS 117
>TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19109093 FORWARD
Length = 514
Score = 64 bits (154), Expect = 1e-010
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIAKAKKE 223
MD + T I+ S+I+T + ENAS+++ LLQD ++++IR+AFGP++L+ + KAK +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 224 LGLMS--CSRPPWSQEELI---SPRN---NNNRGSSLNPASLPFYANGARSSKEMTNN 373
LG S SRP + + SPRN +R S NP S N R +K N+
Sbjct: 61 LGFSSNGFSRPINIHGQSLSSSSPRNGFLEFSRNPS-NPLSSSLTLNTLRDNKPNFNS 117
>TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein | chr2:1859011-1860931
REVERSE
Length = 537
Score = 61 bits (146), Expect = 9e-010
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMG-LLLLQDHGEKEMIRLAFGPETLVHSVIAKAKK 220
M+ E+ +V +RIQ L+PENA+KI G LLL+Q++G ++MIRLAF P++++ SVI K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 221 ELGLMSCSRPPWSQEELISPRNNNNRGSS 307
EL S + + +P+ + GSS
Sbjct: 61 ELARNSHHYHSPPSDHIPTPKFGSFTGSS 89
>TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19645660-19646962 FORWARD
Length = 382
Score = 59 bits (141), Expect = 3e-009
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 MDGYEATRIVLSRIQTLDPENASKIMG-LLLLQDHGEKEMIRLAFGPETLVHSVIAKAKK 220
M+ EA +V +RI L+PENASKI+G LLL+QD +++MIRLAF P++++ S+I K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 221 EL 226
EL
Sbjct: 61 EL 62
>TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / nucleotide
binding / zinc ion binding | chr5:4035891-4038604 REVERSE
Length = 651
Score = 54 bits (128), Expect = 1e-007
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Frame = +2
Query: 323 LPFYANGARSSKEMTNNEFMDDVNPRGDFLGSVHARSGSCVLDGLGYGDSSDLGFGG--V 496
L F + ++++ + D + GD +H RS SC + S D GFGG
Sbjct: 176 LSFLDDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFV----SGDDGFGGGCK 231
Query: 497 PCSYYARGFCKNGSNCRFVHS------EGGAELVGSPSRIE 601
PC Y++RG CKNG +C+F+H +G + SP ++E
Sbjct: 232 PCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKME 272
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,869,515,959
Number of Sequences: 33410
Number of Extensions: 15869515959
Number of Successful Extensions: 504234963
Number of sequences better than 0.0: 0
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