BLASTX 7.6.2
Query= UN30484 /QuerySize=1311
(1310 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family... 155 2e-035
gi|15240751|ref|NP_196896.1| endonuclease VIII-like 3 [Arabidops... 149 9e-034
gi|15221941|ref|NP_175890.1| GRF zinc finger / Zinc knuckle prot... 149 1e-033
gi|297811507|ref|XP_002873637.1| zinc knuckle (CCHC-type) family... 147 5e-033
gi|296082252|emb|CBI21257.3| unnamed protein product [Vitis vini... 60 1e-006
>gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 155 bits (391), Expect = 2e-035
Identities = 92/152 (60%), Positives = 109/152 (71%), Gaps = 8/152 (5%)
Frame = +3
Query: 684 GKESYALEVAEATSLSENIINPV---SNRPT---CQSTTSIETEASFSGCSSLMDLIEQY 845
GK SYA E SEN +PV S +P S TS + EASFSG SS+ LIEQY
Sbjct: 203 GKNSYASE--GVAGHSENTSDPVLNGSKKPEHIHQPSMTSGKIEASFSGGSSMKKLIEQY 260
Query: 846 NSEKLHFENVSMKHVDVLSAFTGSYKILESLRDTSHNLSKQLTEVKKQVKLYEAKTSEFA 1025
NSEKL+FE++SMKHVD L+AF SYK LESLRD +H+L KQL EV+KQVKLYEA+TSEFA
Sbjct: 261 NSEKLNFESISMKHVDALTAFMDSYKQLESLRDRAHSLRKQLLEVEKQVKLYEAETSEFA 320
Query: 1026 ASLEEVCGELTSSQNKMVETARRVLRELSGKK 1121
ASL+EV GE+ SQ KMVETA +V +E+ K
Sbjct: 321 ASLQEVSGEMAKSQKKMVETAGKVAKEVRVNK 352
Score = 121 bits (301), Expect = 5e-025
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = +3
Query: 21 MPTGDCFHCHKPGHWANRCPLKSATKITTIDPAASPPVIHCHCDR-ACVVLTSKTVKNPN 197
M TGDCF CH+PGHWAN CPLK+ T TT+ ASPPVIHC C+ AC +LTSKT KNPN
Sbjct: 1 MSTGDCFRCHQPGHWANNCPLKTTTIPTTV-AVASPPVIHCPCNAGACNILTSKTEKNPN 59
Query: 198 RRFYKCSAVPNCEFFKWCDE 257
RRFY C P+C+FFKWCD+
Sbjct: 60 RRFYTC---PSCKFFKWCDQ 76
>gi|15240751|ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]
Length = 415
Score = 149 bits (376), Expect = 9e-034
Identities = 74/146 (50%), Positives = 86/146 (58%), Gaps = 15/146 (10%)
Frame = +3
Query: 15 GRMPTGDCFHCHKPGHWANRCPLKSATKITTIDPAASPPVIHCHCDRA-CVVLTSKTVKN 191
G M TGDCF C + GHW N CPLKS T DP PP I C C C + + T +N
Sbjct: 4 GTMQTGDCFRCRQAGHWINDCPLKSYTD----DP---PPAIQCPCGGGFCEIKVANTREN 56
Query: 192 PNRRFYKCSAVPNCEFFKWCDEVS---INSQPVSLNPTCPCGSGPCRRVTVPDGPNANRS 362
P R+FYKC NC FFKWCD+V+ I +P P C CG+GPCRRV G R+
Sbjct: 57 PGRKFYKCPTAQNCCFFKWCDKVTDEDIKFRPAFTIPICSCGAGPCRRVKDVSG----RA 112
Query: 363 SFVCCIKKGFGACGFSQWEDDAQIQS 440
+CCIKKGFGACGF +WED I S
Sbjct: 113 YLICCIKKGFGACGFFKWEDVEMIPS 138
Score = 86 bits (210), Expect = 2e-014
Identities = 44/96 (45%), Positives = 64/96 (66%)
Frame = +3
Query: 822 LMDLIEQYNSEKLHFENVSMKHVDVLSAFTGSYKILESLRDTSHNLSKQLTEVKKQVKLY 1001
L +LI+QYNSEKL E++S KHV +LS F SY+ L L + + +L K L E +K++
Sbjct: 304 LQNLIDQYNSEKLQLESISGKHVQMLSEFMASYRRLRLLHEKTSHLRKTLLETEKEMVCC 363
Query: 1002 EAKTSEFAASLEEVCGELTSSQNKMVETARRVLREL 1109
EA+T +F AS EV GE+ SQ +M ETA ++ +E+
Sbjct: 364 EAETLKFGASCREVAGEMAESQKRMQETADKLGKEV 399
>gi|15221941|ref|NP_175890.1| GRF zinc finger / Zinc knuckle protein
[Arabidopsis thaliana]
Length = 353
Score = 149 bits (375), Expect = 1e-033
Identities = 81/141 (57%), Positives = 109/141 (77%), Gaps = 4/141 (2%)
Frame = +3
Query: 699 ALEVAEATSL-SENIINPVSNRPT---CQSTTSIETEASFSGCSSLMDLIEQYNSEKLHF 866
ALE E++S + +++ +N+P ++ TS ETEAS+SG SS+M LIEQY SEKL+
Sbjct: 206 ALEAVESSSQNTSDLVLNANNKPEHIHQRAATSGETEASYSGSSSMMVLIEQYKSEKLYL 265
Query: 867 ENVSMKHVDVLSAFTGSYKILESLRDTSHNLSKQLTEVKKQVKLYEAKTSEFAASLEEVC 1046
E++SMKHV+ L+A+TGSYK LESLRD +H+L KQL EV+KQVKL EA+TSEFAAS++EV
Sbjct: 266 ESISMKHVEALTAYTGSYKQLESLRDRAHSLKKQLLEVEKQVKLCEAETSEFAASVQEVS 325
Query: 1047 GELTSSQNKMVETARRVLREL 1109
GE+ SQ KMVE A +V +E+
Sbjct: 326 GEMAKSQKKMVEIAGKVAKEV 346
Score = 110 bits (274), Expect = 6e-022
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
Frame = +3
Query: 21 MPTGDCFHCHKPGHWANRCPLKSATKITTIDPAASPPVIHCHCDRA-CVVLTSKTVKNPN 197
M +GDCFHCH+PGHWA CPLK+ TK T A SPP IHC C+ C +TSKT KNPN
Sbjct: 1 MSSGDCFHCHQPGHWAKNCPLKTTTK-PTAAAAPSPPDIHCPCNAGPCNTVTSKTEKNPN 59
Query: 198 RRFYKCSAVPNCEFFKWCDE 257
RRFY C P+C +FKWCD+
Sbjct: 60 RRFYTC---PSCGYFKWCDQ 76
>gi|297811507|ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 397
Score = 147 bits (370), Expect = 5e-033
Identities = 71/144 (49%), Positives = 87/144 (60%), Gaps = 14/144 (9%)
Frame = +3
Query: 21 MPTGDCFHCHKPGHWANRCPLKSATKITTIDPAASPPVIHCHCDRA-CVVLTSKTVKNPN 197
M TG+CF C + GHW + CPLKS T DP PP IHC C C + + T +NP
Sbjct: 1 MQTGNCFRCRQAGHWISDCPLKSK---TDDDP---PPAIHCTCGGGFCEIKVANTRENPG 54
Query: 198 RRFYKCSAVPNCEFFKWCDEVS---INSQPVSLNPTCPCGSGPCRRVTVPDGPNANRSSF 368
R+FYKC NC+FFKWCD+V+ I +P P C CG+GPCRRV G R+
Sbjct: 55 RKFYKCPTAQNCKFFKWCDKVTDEDIRFRPAFTIPICSCGAGPCRRVKDVSG----RAYL 110
Query: 369 VCCIKKGFGACGFSQWEDDAQIQS 440
+CCIK+GFGACGF +WED I S
Sbjct: 111 ICCIKEGFGACGFFKWEDAEMIPS 134
Score = 90 bits (221), Expect = 9e-016
Identities = 47/96 (48%), Positives = 64/96 (66%)
Frame = +3
Query: 822 LMDLIEQYNSEKLHFENVSMKHVDVLSAFTGSYKILESLRDTSHNLSKQLTEVKKQVKLY 1001
L DLI+QYNSEKL E++S KHV VLS F SY+ L L + + +L K L E +K++
Sbjct: 286 LQDLIDQYNSEKLQLESISGKHVQVLSEFMSSYRRLRLLHEKTCHLRKTLLETEKEMVCC 345
Query: 1002 EAKTSEFAASLEEVCGELTSSQNKMVETARRVLREL 1109
EA+T EF AS EV GE+ SQ +M ETA ++ +E+
Sbjct: 346 EAETLEFGASCREVAGEMAESQKRMQETAEQLGKEV 381
>gi|296082252|emb|CBI21257.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 60 bits (143), Expect = 1e-006
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 297 CPCGSGPCRRVTVPDGPNANRSSFVCCIKKGFGACGFSQWEDDAQIQSE 443
C CG+G CR GPNA R SF+C +KKG GAC F QWE DAQ+ ++
Sbjct: 2 CSCGAGICRISMEKFGPNAGRRSFICPVKKGQGACNFFQWE-DAQVNTK 49
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,546,758,379,358
Number of Sequences: 15229318
Number of Extensions: 3546758379358
Number of Successful Extensions: 845574274
Number of sequences better than 0.0: 0
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