BLASTX 7.6.2
Query= UN30502 /QuerySize=946
(945 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog OS... 407 9e-113
sp|Q96GM5|SMRD1_HUMAN SWI/SNF-related matrix-associated actin-de... 84 2e-015
sp|Q61466|SMRD1_MOUSE SWI/SNF-related matrix-associated actin-de... 84 2e-015
sp|Q6STE5|SMRD3_HUMAN SWI/SNF-related matrix-associated actin-de... 82 5e-015
sp|Q6P9Z1|SMRD3_MOUSE SWI/SNF-related matrix-associated actin-de... 82 6e-015
sp|Q2TBN1|SMRD1_BOVIN SWI/SNF-related matrix-associated actin-de... 77 1e-013
sp|O54772|SMRD2_RAT SWI/SNF-related matrix-associated actin-depe... 74 2e-012
sp|Q99JR8|SMRD2_MOUSE SWI/SNF-related matrix-associated actin-de... 72 4e-012
sp|Q92925|SMRD2_HUMAN SWI/SNF-related matrix-associated actin-de... 69 6e-011
sp|Q556Z0|SNF12_DICDI SWI/SNF complex component SNF12 homolog OS... 68 9e-011
sp|Q9GRX4|NONA_DROLR Protein no-on-transient A OS=Drosophila lit... 60 2e-008
sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila vir... 58 8e-008
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho... 53 3e-006
>sp|Q9FMT4|SNF12_ARATH SWI/SNF complex component SNF12 homolog OS=Arabidopsis
thaliana GN=At5g14170 PE=1 SV=1
Length = 534
Score = 407 bits (1044), Expect = 9e-113
Identities = 221/272 (81%), Positives = 232/272 (85%), Gaps = 16/272 (5%)
Frame = +3
Query: 129 NPQKPQGSSAAPSPFGNPGVQASASSVPGNQGFTQQQSHMAPNFPAQFQFSQAQALAHAQ 308
NPQKPQGS AP PFGNPG+ +++SVPGNQGF QSHMA NF AQFQFSQAQALAH
Sbjct: 7 NPQKPQGS--APLPFGNPGM--ASASVPGNQGFA--QSHMAANFQAQFQFSQAQALAH-- 58
Query: 309 AQAQSKAQAQFQAQMQAGMSTMNQGQQGGGSSQGGIGVLGSSSSPSMTPGSLNMKRFQQR 488
AQAQSK QAQ QAQ+QA TMNQ Q GIG LG SS TPGSLNMKRFQQ+
Sbjct: 59 AQAQSKVQAQLQAQLQAQGMTMNQAQ-----GSPGIGGLGPSSPSLTTPGSLNMKRFQQK 113
Query: 489 PSMRPPSGFPSSNNNTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLE 668
P MRPP G P+S NNTISPMRTMELTPAARKKK KLPEKSLQERVAAILPESALYTQLLE
Sbjct: 114 PPMRPP-GAPAS-NNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLE 171
Query: 669 FESRVDAALSRKKVDIQEALKNPPCTQKTLRIYVFNTFANQQNNTIPGNPNADPPTWTLK 848
FESRVDAAL+RKKVDIQEALKNPPC QKTLRIYVFN+FAN QNNTIPGNPNADPPTWTLK
Sbjct: 172 FESRVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFAN-QNNTIPGNPNADPPTWTLK 230
Query: 849 IVGRILEDGVDPDQPGFVQQANPSHPKFSSFF 944
I+GRILEDGVDPDQPGFVQ+ANP HPKFSSFF
Sbjct: 231 IIGRILEDGVDPDQPGFVQKANPLHPKFSSFF 262
>sp|Q96GM5|SMRD1_HUMAN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 OS=Homo sapiens GN=SMARCD1
PE=1 SV=2
Length = 515
Score = 84 bits (205), Expect = 2e-015
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Frame = +3
Query: 447 MTP--GSLNMKRFQQRPSMRP---PSGFPSSNNNTISPMRTMELTPAA------RKKKMK 593
MTP S+ + PS+RP SG S +P + ++ A KK K
Sbjct: 69 MTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRP-APQQIQQVQQQAVQNRNHNAKKKK 127
Query: 594 LPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCTQKTLRIYVF 773
+ +K L +R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LRI++
Sbjct: 128 MADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFIS 187
Query: 774 NTFANQQNNTIPGNPNADPPTWTLKIVGRILEDGVDPDQPGFVQQANPSHPKFSSFF 944
NTF +++ G +W L++ GR+LED A KFSSFF
Sbjct: 188 NTFNPAKSDAEDGEGTV--ASWELRVEGRLLEDSALSK-----YDATKQKRKFSSFF 237
>sp|Q61466|SMRD1_MOUSE SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 OS=Mus musculus GN=Smarcd1
PE=1 SV=3
Length = 515
Score = 84 bits (205), Expect = 2e-015
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Frame = +3
Query: 447 MTP--GSLNMKRFQQRPSMRP---PSGFPSSNNNTISPMRTMELTPAA------RKKKMK 593
MTP S+ + PS+RP SG S +P + ++ A KK K
Sbjct: 69 MTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRP-APQQIQQVQQQAVQNRNHNAKKKK 127
Query: 594 LPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCTQKTLRIYVF 773
+ +K L +R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LRI++
Sbjct: 128 MADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFIS 187
Query: 774 NTFANQQNNTIPGNPNADPPTWTLKIVGRILEDGVDPDQPGFVQQANPSHPKFSSFF 944
NTF +++ G +W L++ GR+LED A KFSSFF
Sbjct: 188 NTFNPAKSDAEDGEGTV--ASWELRVEGRLLEDAALSK-----YDATKQKRKFSSFF 237
>sp|Q6STE5|SMRD3_HUMAN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 OS=Homo sapiens GN=SMARCD3
PE=1 SV=1
Length = 483
Score = 82 bits (201), Expect = 5e-015
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Frame = +3
Query: 351 MQAGMSTMNQGQQGGGSSQGGIGVLGSSSSPSMTPGSLNMKRFQQRPSMRPPSGFPSSNN 530
M +G +QG G +G SP++ PG R PP G S
Sbjct: 30 MPSGARMPHQGAPMGPPGSPYMG------SPAVRPGLAPAGMEPARKRAAPPPG-QSQAQ 82
Query: 531 NTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKV 710
+ P+ T + K++ K+ +K L +R+ ++PES Y LL FE ++D + RK+V
Sbjct: 83 SQGQPVPTAPARSRSAKRR-KMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRV 141
Query: 711 DIQEALKNPPCTQKTLRIYVFNTFANQQNNTIPGNPNADP-----PTWTLKIVGRILED 872
DIQEALK P ++ LR+Y+ NTF P P+A+ +W L++ G++L+D
Sbjct: 142 DIQEALKRPMKQKRKLRLYISNTFN-------PAKPDAEDSDGSIASWELRVEGKLLDD 193
>sp|Q6P9Z1|SMRD3_MOUSE SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 OS=Mus musculus GN=Smarcd3
PE=1 SV=2
Length = 483
Score = 82 bits (200), Expect = 6e-015
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
Frame = +3
Query: 351 MQAGMSTMNQGQQGGGSSQGGIGVLGSSSSPSMTPGSLNMKRFQQRPSMRPPSGFPSSNN 530
M +G +QG G +G SP++ PG R PP G S
Sbjct: 30 MPSGARMPHQGAPMGPPGSPYMG------SPAVRPGLAPAGMEPARKRAAPPPG-QSQAQ 82
Query: 531 NTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKV 710
P+ T + K++ K+ +K L +R+ ++PES Y LL FE ++D + RK+V
Sbjct: 83 GQGQPVPTAPARSRSAKRR-KMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRV 141
Query: 711 DIQEALKNPPCTQKTLRIYVFNTFANQQNNTIPGNPNADP-----PTWTLKIVGRILED 872
DIQEALK P ++ LR+Y+ NTF P P+A+ +W L++ G++L+D
Sbjct: 142 DIQEALKRPMKQKRKLRLYISNTFN-------PAKPDAEDSDGSIASWELRVEGKLLDD 193
>sp|Q2TBN1|SMRD1_BOVIN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 OS=Bos taurus GN=SMARCD1
PE=2 SV=1
Length = 515
Score = 77 bits (189), Expect = 1e-013
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +3
Query: 582 KKMKLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCTQKTLR 761
KK K+ +K L +R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LR
Sbjct: 124 KKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR 183
Query: 762 IYVFNTFANQQNNTIPGNPNADPPTWTLKIVGRILED 872
I++ NTF +++ G +W L++ GR+LED
Sbjct: 184 IFISNTFNPAKSDAEDGEGTV--ASWELRVEGRLLED 218
>sp|O54772|SMRD2_RAT SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily D member 2 OS=Rattus norvegicus GN=Smarcd2 PE=2
SV=2
Length = 456
Score = 74 bits (179), Expect = 2e-012
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Frame = +3
Query: 486 RPSMRPPSGFPSSNNNTISPMRTMELTPAARK--KKMKLPEKSLQERVAAILPESALYTQ 659
RP M PP+ + P + PA R+ K+ K+ +K L +R+ ++PES Y
Sbjct: 29 RPGM-PPTMMDPFRKRLLVPQAQPPM-PAQRRGLKRRKMADKVLPQRIRELVPESQAYMD 86
Query: 660 LLEFESRVDAALSRKKVDIQEALKNPPCTQKTLRIYVFNTF----ANQQNNTIPGNPNAD 827
LL FE ++D ++RK+++IQEA+K P ++ LRIY+ NTF A+ N+ G P
Sbjct: 87 LLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGT 146
Query: 828 P 830
P
Sbjct: 147 P 147
>sp|Q99JR8|SMRD2_MOUSE SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 OS=Mus musculus GN=Smarcd2
PE=2 SV=1
Length = 456
Score = 72 bits (176), Expect = 4e-012
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Frame = +3
Query: 486 RPSMRPPSGFPSSNNNTISPMRTMELTPAARK--KKMKLPEKSLQERVAAILPESALYTQ 659
RP M PP+ + P + PA R+ K+ K+ +K L +R+ ++PES Y
Sbjct: 29 RPGM-PPTMMDPFRKRLLVPQAQPPM-PAQRRGLKRRKMADKVLPQRIRELVPESQAYMD 86
Query: 660 LLEFESRVDAALSRKKVDIQEALKNPPCTQKTLRIYVFNTF----ANQQNNTIPGNPNAD 827
LL FE ++D ++RK+++IQEA+K P ++ LRIY+ NTF A+ N G P
Sbjct: 87 LLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGT 146
Query: 828 P 830
P
Sbjct: 147 P 147
>sp|Q92925|SMRD2_HUMAN SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 OS=Homo sapiens GN=SMARCD2
PE=1 SV=2
Length = 456
Score = 69 bits (166), Expect = 6e-011
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = +3
Query: 567 PAARK--KKMKLPEKSLQERVAAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPP 740
PA R+ K+ K+ +K L +R+ ++PES Y LL FE ++D ++RK+++IQEA+K P
Sbjct: 54 PAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPL 113
Query: 741 CTQKTLRIYVFNTFA 785
++ LRIY+ NTF+
Sbjct: 114 TQKRKLRIYISNTFS 128
>sp|Q556Z0|SNF12_DICDI SWI/SNF complex component SNF12 homolog OS=Dictyostelium
discoideum GN=snf12-1 PE=3 SV=1
Length = 456
Score = 68 bits (164), Expect = 9e-011
Identities = 38/128 (29%), Positives = 77/128 (60%), Gaps = 13/128 (10%)
Frame = +3
Query: 519 SSNNNTISPMRTMELTPAARKKKMKLPEKSLQERVAAILPESALYTQLLEFESRVDAALS 698
++N+N + ++ P++ + LP E + + PE L++QLLEFE ++DA+++
Sbjct: 40 NNNSNNTNIGNSINGIPSSLPPSVTLP----VEELISFAPECLLFSQLLEFEEKLDASIN 95
Query: 699 RKKVDIQEA-LKNPPCTQKTLRIYVFNTFANQ------QNNTIPGNPNADPPTWTLKIVG 857
++ +DIQEA +N +TLR+ ++NT++NQ N ++ N + P+W+L++ G
Sbjct: 96 KRLIDIQEASRRNSIKNIRTLRLSIYNTYSNQSAYYHLDNKSL--NSVQERPSWSLRVEG 153
Query: 858 RILEDGVD 881
++L++ D
Sbjct: 154 KLLDESQD 161
>sp|Q9GRX4|NONA_DROLR Protein no-on-transient A OS=Drosophila littoralis GN=nonA
PE=2 SV=1
Length = 698
Score = 60 bits (145), Expect = 2e-008
Identities = 48/124 (38%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Frame = +3
Query: 105 GNNNNNNNNPQKPQGSSAAPSPFGNPGVQASASSVPGNQGFTQQQSHMAPNFPAQFQFSQ 284
GN N +N Q S +P + G S+ N Q S+ A AQ Q
Sbjct: 110 GNQNRSNFQNQNQNQKSTTDAPKADGGNLNDKSNEANNA--NQSNSNSAAQAQAQL---Q 164
Query: 285 AQALAHAQAQAQSKAQAQFQAQMQAGMSTMNQ-----GQQGGGSSQGGIGVLGSSSSPSM 449
AQA AHAQAQAQ+ AQAQ QAQ QA NQ G GGG GG G G
Sbjct: 165 AQAQAHAQAQAQAHAQAQAQAQAQAHAHAQNQAFRARGGGGGGGGGGGGGGGGGGGGRDR 224
Query: 450 TPGS 461
GS
Sbjct: 225 NRGS 228
>sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila virilis GN=nonA
PE=2 SV=1
Length = 697
Score = 58 bits (139), Expect = 8e-008
Identities = 43/107 (40%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Frame = +3
Query: 105 GNNNNNNNNPQKPQGSSAAPSPFGNPGVQASASSVPGNQGFTQQQSHMAPNFPAQFQFSQ 284
GN N +N Q S +P + G S+ N Q S+ A AQ Q
Sbjct: 104 GNQNRSNFQNQNQNQKSTTDAPKADGGNLNDKSNEANNA--NQSNSNSAAQAQAQL---Q 158
Query: 285 AQALAHAQAQAQSKAQAQFQAQMQAGMSTMNQG--QQGGGSSQGGIG 419
AQA AHAQAQAQ++AQA QAQ QA NQ +GGG GG G
Sbjct: 159 AQAQAHAQAQAQAQAQAHAQAQAQAHAHAQNQAFRARGGGGGGGGGG 205
>sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Homo sapiens
GN=TCERG1 PE=1 SV=2
Length = 1098
Score = 53 bits (125), Expect = 3e-006
Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Frame = +3
Query: 144 QGSSAAPSPFGNPGVQASASSVPGNQGFTQQQSHMAPNFPAQFQF-----SQAQALAHAQ 308
Q S P VQA A + Q Q Q+ AQ Q +QAQA A AQ
Sbjct: 169 QQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ 228
Query: 309 AQAQSKAQAQFQAQMQAGMSTMNQGQQGGGSS------QGGIGVLGSSSSPSMT 452
AQAQ++AQAQ QAQ+QA + Q Q G S+ + SSS+PS T
Sbjct: 229 AQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSST 282
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,186,536,322
Number of Sequences: 518415
Number of Extensions: 123186536322
Number of Successful Extensions: 781180378
Number of sequences better than 0.0: 0
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