BLASTX 7.6.2
Query= UN30511 /QuerySize=866
(865 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O43390|HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R ... 57 1e-007
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 55 7e-007
>sp|O43390|HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens
GN=HNRNPR PE=1 SV=1
Length = 633
Score = 57 bits (137), Expect = 1e-007
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Frame = -1
Query: 856 AQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGGKRDFGFVHYAERSSALRAV 677
A+VK L+V+N+ + E L++ F G++ ++ +D+ FVH+ +R +A++A+
Sbjct: 338 AKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK------LKDYAFVHFEDRGAAVKAM 391
Query: 676 KDSERYEINGQPLEVVLAKP--------QAERKHDSSYTYGAAPTPAPFALPTFGGFAAP 521
+ EI G+ +E+VLAKP QA R+ S Y P +P P
Sbjct: 392 DEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMP-------P 444
Query: 520 AYGAMGSGLGIAGSFSQPMIYG 455
G G G G P YG
Sbjct: 445 PIRGRGRGGGRGGYGYPPDYYG 466
>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2
Length = 631
Score = 55 bits (130), Expect = 7e-007
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = -1
Query: 841 LYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGGK-RDFGFVHYAERSSALRAVKDSE 665
+YVKN+ + +E+F+ G VT + + GK R FGFV++ SAL AVK+
Sbjct: 241 VYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMN 300
Query: 664 RYEINGQPLEVVLAKPQAERKHDSSYTY 581
EI+GQ L V A+ + ER + Y
Sbjct: 301 DKEIDGQKLYVGRAQKKRERLDELKRLY 328
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,186,536,322
Number of Sequences: 518415
Number of Extensions: 123186536322
Number of Successful Extensions: 781180378
Number of sequences better than 0.0: 0
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