BLASTX 7.6.2
Query= UN30857 /QuerySize=938
(937 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING... 130 1e-030
TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding... 120 1e-027
TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding... 120 1e-027
TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING... 114 8e-026
TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 58 7e-009
TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 58 7e-009
TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-R... 58 7e-009
>TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING PROTEIN 5);
double-stranded RNA binding | chr5:16438547-16439916 FORWARD
Length = 394
Score = 130 bits (326), Expect = 1e-030
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
PSYTCIREGPDHAPRFKA+VNFNGEIFESPTYCSTLRQAEHAAAEVSL+VLSSRVPSKSL
Sbjct: 18 PSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAAAEVSLNVLSSRVPSKSL 77
Query: 481 TAKIL 467
TAKIL
Sbjct: 78 TAKIL 82
Score = 90 bits (221), Expect = 2e-018
Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 17/110 (15%)
Frame = -3
Query: 347 LQQFKRRSPHEAKAETEMMMITTRSQGG-----YSNQIPFSDRGRFSFVGGCN----RLA 195
+QQ+K RS EAK ET MI ++++ S Q+PFSD R++FVGGC+ LA
Sbjct: 256 IQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQMPFSDMNRYNFVGGCSVNPYSLA 315
Query: 194 PAVQIRSVIPVFAAPASKPNPNPSTSSSSSSSSINSCSVQEKTLNSNENC 45
PAVQ+RSVIPVFAAP KPNPN + SS SS SV E T +SN +C
Sbjct: 316 PAVQMRSVIPVFAAPPPKPNPNLNPSSLSS-------SVNEFT-SSNNSC 357
Score = 75 bits (184), Expect = 4e-014
Identities = 36/38 (94%)
Frame = -2
Query: 459 KNLLQETAHRAGLDLPMYTSVRSGSYHFPTFSCTVELA 346
KNLLQETAHRAGLDLPMYTSVRSGS HFP FSCTVELA
Sbjct: 89 KNLLQETAHRAGLDLPMYTSVRSGSCHFPGFSCTVELA 126
>TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 120 bits (300), Expect = 1e-027
Identities = 56/65 (86%), Positives = 62/65 (95%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
PSYTC REGPDHAPRFKA+VNFNGEIFESPTYCSTLRQAEH+AAEV+LS LSS+ PSKSL
Sbjct: 18 PSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSAAEVALSALSSKGPSKSL 77
Query: 481 TAKIL 467
TA++L
Sbjct: 78 TARVL 82
Score = 72 bits (175), Expect = 4e-013
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = -2
Query: 459 KNLLQETAHRAGLDLPMYTSVRSGSYHFPTFSCTVELA 346
KNLLQETAHRAGLDLP+YTSVRSG H PTFSCTVELA
Sbjct: 89 KNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELA 126
Score = 52 bits (124), Expect = 4e-007
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Frame = -3
Query: 263 YSNQIPFSDRGRFSFVGGCNRLAPAVQIRSVIPVFAAPASKPNPNPSTSSSSSSSSINSC 84
YS +PF SFV +LAPAV IRSVIPV +AP KPNPNP+ SS + + +
Sbjct: 297 YSKLLPFP-----SFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNPN-SSPFITRELGNG 350
Query: 83 SVQEKTL 63
S ++K+L
Sbjct: 351 SQEKKSL 357
>TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 120 bits (300), Expect = 1e-027
Identities = 56/65 (86%), Positives = 62/65 (95%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
PSYTC REGPDHAPRFKA+VNFNGEIFESPTYCSTLRQAEH+AAEV+LS LSS+ PSKSL
Sbjct: 18 PSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSAAEVALSALSSKGPSKSL 77
Query: 481 TAKIL 467
TA++L
Sbjct: 78 TARVL 82
Score = 72 bits (175), Expect = 4e-013
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = -2
Query: 459 KNLLQETAHRAGLDLPMYTSVRSGSYHFPTFSCTVELA 346
KNLLQETAHRAGLDLP+YTSVRSG H PTFSCTVELA
Sbjct: 89 KNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELA 126
Score = 52 bits (124), Expect = 4e-007
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Frame = -3
Query: 263 YSNQIPFSDRGRFSFVGGCNRLAPAVQIRSVIPVFAAPASKPNPNPSTSSSSSSSSINSC 84
YS +PF SFV +LAPAV IRSVIPV +AP KPNPNP+ SS + + +
Sbjct: 297 YSKLLPFP-----SFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNPN-SSPFITRELGNG 350
Query: 83 SVQEKTL 63
S ++K+L
Sbjct: 351 SQEKKSL 357
>TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING PROTEIN 2);
double-stranded RNA binding | chr2:12134098-12135915 REVERSE
Length = 435
Score = 114 bits (285), Expect = 8e-026
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
PSYTCIREGPDHAPRFKA VNFNGEIFESP YCSTLRQAEH+AAEV+L+ LS+R PS SL
Sbjct: 18 PSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSAAEVALNALSNRGPSHSL 77
Query: 481 TAKIL 467
A+IL
Sbjct: 78 AARIL 82
>TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 58 bits (139), Expect = 7e-009
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
P Y REGP HAPRF+ V F G+ F+S + TL+ AEHAAA+++++ L+ + P
Sbjct: 21 PVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAAAKIAVASLTPQSPEGID 80
Query: 481 TAKILVS*ELATRDST 434
A + E+A ++S+
Sbjct: 81 VAYKNLLQEIAQKESS 96
>TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 58 bits (139), Expect = 7e-009
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
P Y REGP HAPRF+ V F G+ F+S + TL+ AEHAAA+++++ L+ + P
Sbjct: 21 PVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAAAKIAVASLTPQSPEGID 80
Query: 481 TAKILVS*ELATRDST 434
A + E+A ++S+
Sbjct: 81 VAYKNLLQEIAQKESS 96
>TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 330
Score = 58 bits (139), Expect = 7e-009
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -1
Query: 661 PSYTCIREGPDHAPRFKAAVNFNGEIFESPTYCSTLRQAEHAAAEVSLSVLSSRVPSKSL 482
P Y REGP HAPRF+ V F G+ F+S + TL+ AEHAAA+++++ L+ + P
Sbjct: 21 PVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAAAKIAVASLTPQSPEGID 80
Query: 481 TAKILVS*ELATRDST 434
A + E+A ++S+
Sbjct: 81 VAYKNLLQEIAQKESS 96
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,165,306,606
Number of Sequences: 33410
Number of Extensions: 16165306606
Number of Successful Extensions: 514567783
Number of sequences better than 0.0: 0
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