BLASTX 7.6.2
Query= UN31244 /QuerySize=1198
(1197 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17870.1 | Symbols: | cold-shock DNA-binding ... 356 2e-098
TAIR9_protein||AT4G36020.1 | Symbols: CSDP1 | CSDP1 (cold shock ... 345 5e-095
TAIR9_protein||AT4G38680.1 | Symbols: GRP2, CSDP2, CSP2, ATCSP2 ... 130 2e-030
TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE... 123 2e-028
TAIR9_protein||AT3G42860.1 | Symbols: | zinc knuckle (CCHC-type... 83 4e-016
TAIR9_protein||AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SR... 52 5e-007
TAIR9_protein||AT2G24590.1 | Symbols: | splicing factor, putati... 52 9e-007
>TAIR9_protein||AT2G17870.1 | Symbols: | cold-shock DNA-binding family protein
| chr2:7764276-7765181 REVERSE
Length = 302
Score = 356 bits (913), Expect = 2e-098
Identities = 181/312 (58%), Positives = 207/312 (66%), Gaps = 44/312 (14%)
Frame = +2
Query: 26 ALENQSAAVRFTGKVNWFSDSKGYGFITPDDESEELFVHQSSIVSEGYRSLAVDDLVEFE 205
A+E+QSAA R GKV+WFSD KGYGFITPDD EELFVHQSSIVS+G+RSL + + VE+E
Sbjct: 2 AMEDQSAA-RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYE 60
Query: 206 IAQGTDGKTKAVEVTAPGGAPLKKKETSSRGRTGGRGGGCYNCGKAGHVAKDC------- 364
IA G+DGKTKA+EVTAPGG L KKE SSR G GG C+NCG+ GH+AKDC
Sbjct: 61 IALGSDGKTKAIEVTAPGGGSLNKKENSSR----GSGGNCFNCGEVGHMAKDCDGGSGGK 116
Query: 365 ---------SGERGECYTCGDTGHLARDCLQKPSGGGERVGGGGRGDGCYTCGDTGHMAR 517
SG GECY CGD GH ARDC Q SGGG GGGG G CY+CG+ GH+A+
Sbjct: 117 SFGGGGGRRSGGEGECYMCGDVGHFARDCRQ--SGGGNSGGGGGGGRPCYSCGEVGHLAK 174
Query: 518 DCVKKSGGERVSSG-----AVGTCYTCGGTGHMARDCPSKRQTGGG--------CYECGG 658
DC SGG R G CY CGG GH ARDC RQ GGG CY CGG
Sbjct: 175 DCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDC---RQNGGGNVGGGGSTCYTCGG 231
Query: 659 AGHMARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGECYK 838
GH+A+ C + GGGGGGR+ CYECG GH+ARDCDRRGSG G GGG +C+
Sbjct: 232 VGHIAKVCTSKIPSGGGGGGRA---CYECGGTGHLARDCDRRGSGSSG--GGGGSNKCFI 286
Query: 839 CGESGHFARECS 874
CG+ GHFAREC+
Sbjct: 287 CGKEGHFARECT 298
Score = 112 bits (280), Expect = 4e-025
Identities = 55/117 (47%), Positives = 63/117 (53%), Gaps = 15/117 (12%)
Frame = +2
Query: 296 GRTGGRGGGCYNCGKAGHVAKDC--------SGERGECYTCGDTGHLARDCLQK-PSGGG 448
G G G GCY CG GH A+DC G CYTCG GH+A+ C K PSGG
Sbjct: 189 GGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGG- 247
Query: 449 ERVGGGGRGDGCYTCGDTGHMARDCVKKSGGERVSSGAVGTCYTCGGTGHMARDCPS 619
GGGGR CY CG TGH+ARDC ++ G G C+ CG GH AR+C S
Sbjct: 248 ---GGGGR--ACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
>TAIR9_protein||AT4G36020.1 | Symbols: CSDP1 | CSDP1 (cold shock domain protein
1); RNA binding / double-stranded DNA binding / nucleic acid binding /
single-stranded DNA binding | chr4:17043443-17044342 REVERSE
Length = 300
Score = 345 bits (883), Expect = 5e-095
Identities = 186/311 (59%), Positives = 204/311 (65%), Gaps = 44/311 (14%)
Frame = +2
Query: 26 ALENQSAAVRFTGKVNWFSDSKGYGFITPDDESEELFVHQSSIVSEGYRSLAVDDLVEFE 205
A E+QSAA R TGKVNWF+ SKGYGFITPDD S ELFVHQSSIVSEGYRSL V D VEF
Sbjct: 2 ASEDQSAA-RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFA 60
Query: 206 IAQGTDGKTKAVEVTAPGGAPLKKKETSSRG---RTGGRGGGCYNCGKAGHVAKDC---- 364
I QG+DGKTKAV VTAPGG L KKE +SRG R GG G GCYNCG+ GH++KDC
Sbjct: 61 ITQGSDGKTKAVNVTAPGGGSL-KKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGG 119
Query: 365 ---SGER----GE-CYTCGDTGHLARDCLQKPSGGGERVGGGGRGDGCYTCGDTGHMARD 520
GER GE CY CGDTGH ARDC G +R G DGCYTCGD GH+ARD
Sbjct: 120 GGGGGERRSRGGEGCYNCGDTGHFARDC-TSAGNGDQRGATKGGNDGCYTCGDVGHVARD 178
Query: 521 CVKKSGGERVSSGAV----GTCYTCGGTGHMARDCPSK------RQTGGG---CYECGGA 661
C +KS G GAV CYTCG GH ARDC K R GGG CY CGG
Sbjct: 179 CTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGV 238
Query: 662 GHMARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGECYKC 841
GH+ARDC + + S GCY+CG +GH+ARDCD+RGSGG GG CYKC
Sbjct: 239 GHIARDCATK--------RQPSRGCYQCGGSGHLARDCDQRGSGG-----GGNDNACYKC 285
Query: 842 GESGHFARECS 874
G+ GHFARECS
Sbjct: 286 GKEGHFARECS 296
Score = 85 bits (208), Expect = 9e-017
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +2
Query: 656 GAGHMARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGECY 835
G G + ++ RG+G GGG S GCY CG GH+++DC G GGGG + GG CY
Sbjct: 78 GGGSLKKENNSRGNGARRGGGGS--GCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCY 135
Query: 836 KCGESGHFARECSVA 880
CG++GHFAR+C+ A
Sbjct: 136 NCGDTGHFARDCTSA 150
>TAIR9_protein||AT4G38680.1 | Symbols: GRP2, CSDP2, CSP2, ATCSP2 | GRP2 (GLYCINE
RICH PROTEIN 2); double-stranded DNA binding / mRNA binding / nucleic
acid binding / single-stranded DNA binding | chr4:18072240-18072851
REVERSE
Length = 204
Score = 130 bits (326), Expect = 2e-030
Identities = 79/193 (40%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Frame = +2
Query: 53 RFTGKVNWFSDSKGYGFITPDDESEELFVHQSSIVSEGYRSLAVDDLVEFEIAQGTDGKT 232
R G V WF KG+GFITPDD ++LFVHQSSI SEG+RSLA ++ VEFE+ + +
Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNRP 69
Query: 233 KAVEVTAPGGAPLKKKETSSRGRTGGRGGGCYNCGKAGHVAKDCSGERGECYTCGDTGHL 412
KA++V+ P GAP+ + S G +GGRGG G G G G G
Sbjct: 70 KAIDVSGPDGAPV--QGNSGGGSSGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRG 127
Query: 413 ARDCLQKPSGGGE----RVGGGGRGDGCYTCGDTGHMARDCVKKSGGERVSSGAVGTCYT 580
DC + G GGGG G G G G GG R G G+CY+
Sbjct: 128 GSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGGYGGGGRGGGGGGGSCYS 187
Query: 581 CGGTGHMARDCPS 619
CG +GH ARDC S
Sbjct: 188 CGESGHFARDCTS 200
Score = 100 bits (248), Expect = 2e-021
Identities = 55/111 (49%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Frame = +2
Query: 536 GGERVSSGAVGTCYTCGGTGHMARDCPSKRQTGGGCYECGGAGHMARDCERRGSG-GGGG 712
GG R G Y GG G+ R + G CY+CG GHMARDC G G GGGG
Sbjct: 98 GGGRGGGRGSGGGYGGGGGGYGGRG--GGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG 155
Query: 713 GGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGECYKCGESGHFAR 865
GG GG Y G G+ GGGGR GGGGG CY CGESGHFAR
Sbjct: 156 GGYGGGGGYGGGGGGY----------GGGGRGGGGGGGSCYSCGESGHFAR 196
Score = 73 bits (178), Expect = 3e-013
Identities = 41/88 (46%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Frame = +2
Query: 632 GGGCYECGGAGHMARDCERRGSGG-------GGGGGRSSGGCYECGVAGHMARDCDRRGS 790
GGG GG G DC + G G GGGG GG G G G
Sbjct: 115 GGGYGGRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG---GGYGGGGGYGGGGGGY 171
Query: 791 GGGGRKAGGGGGECYKCGESGHFARECS 874
GGGGR GGGGG CY CGESGHFAR+C+
Sbjct: 172 GGGGRGGGGGGGSCYSCGESGHFARDCT 199
>TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN
2B); DNA binding / nucleic acid binding / zinc ion binding |
chr2:9036983-9037588 REVERSE
Length = 202
Score = 123 bits (308), Expect = 2e-028
Identities = 80/198 (40%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Frame = +2
Query: 35 NQSAAVRFTGKVNWFSDSKGYGFITPDDESEELFVHQSSIVSEGYRSLAVDDLVEFEIAQ 214
N S R G V WF KG+GFITP D ++LFVHQSSI SEG+RSLA ++ VEF++
Sbjct: 8 NMSGGDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEV 67
Query: 215 GTDGKTKAVEVTAPGGAPLKKKE---TSSRGRTGGRGGGCYNCGKAGHVAKDCSGERGEC 385
G+ KA+EV+ P GAP++ SS GR G GGG G+ G G RG
Sbjct: 68 DNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSG 127
Query: 386 YTCGDTGHLARDCLQKPSGGGERVGGGGRGDGCYTCGDTGHMARDCVKKSGGERVSSGAV 565
G G C K G +G G Y+ G G SGG G
Sbjct: 128 GRGGGGGD--NSCF-KCGEPGHMARECSQGGGGYSGGGGGGR-----YGSGGGGGGGGGG 179
Query: 566 GTCYTCGGTGHMARDCPS 619
+CY+CG +GH ARDC S
Sbjct: 180 LSCYSCGESGHFARDCTS 197
Score = 92 bits (227), Expect = 6e-019
Identities = 53/117 (45%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Frame = +2
Query: 440 GGGERVGGGGRGDGCYTCGDTGHMARDCVKKSGGERVSSGAVGTCYTCGGTGHMARDCPS 619
GGG R GGGRG G Y G G + G R G +C+ CG GHMAR+C
Sbjct: 104 GGGGR--GGGRGGGSYGGGYGG--------RGSGGRGGGGGDNSCFKCGEPGHMAREC-- 151
Query: 620 KRQTGGGCYECGGAGHMARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGS 790
GGG Y GG G R GSGGGGGGG CY CG +GH ARDC G+
Sbjct: 152 --SQGGGGYSGGGGG------GRYGSGGGGGGGGGGLSCYSCGESGHFARDCTSGGA 200
Score = 64 bits (154), Expect = 2e-010
Identities = 35/75 (46%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Frame = +2
Query: 653 GGAGHMARDCERRGSGGGGG-GGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGE 829
G +G R G GGGGG GG GG Y G G G GGR GGG
Sbjct: 88 GNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGR----------GSGGRGGGGGDNS 137
Query: 830 CYKCGESGHFARECS 874
C+KCGE GH ARECS
Sbjct: 138 CFKCGEPGHMARECS 152
>TAIR9_protein||AT3G42860.1 | Symbols: | zinc knuckle (CCHC-type) family
protein | chr3:14946458-14948097 REVERSE
Length = 373
Score = 83 bits (203), Expect = 4e-016
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +2
Query: 626 QTGGGCYECGGAGHMARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGSG---- 793
+TG CY+CG GH ARDC + G ++G C++CG GH +RDC +
Sbjct: 234 KTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYE 293
Query: 794 GGGRKAGGGGGECYKCGESGHFARECS 874
G K+ GECYKCG+ GH++R+C+
Sbjct: 294 PGQMKSSSSSGECYKCGKQGHWSRDCT 320
>TAIR9_protein||AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein
binding | chr4:15306983-15308064 FORWARD
Length = 201
Score = 52 bits (124), Expect = 5e-007
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 671 ARDCERRGSGGGGGGGRSSGGCYECGVAGHMARDCDRRGSGGGGRKAGGGGGECYKCGES 850
ARD R G G S + G G R DR G GGG GG +CY+CGE+
Sbjct: 51 ARDAIRALDGKNGWRVEQS---HNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGET 107
Query: 851 GHFAREC 871
GHFAREC
Sbjct: 108 GHFAREC 114
>TAIR9_protein||AT2G24590.1 | Symbols: | splicing factor, putative |
chr2:10449837-10450860 FORWARD
Length = 197
Score = 52 bits (122), Expect = 9e-007
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 782 RGSGGGGRKAGGGGGECYKCGESGHFAREC 871
RG G GGR GG +CY+CGESGHFAREC
Sbjct: 82 RGGGDGGRGRGGSDLKCYECGESGHFAREC 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,380,708,405
Number of Sequences: 33410
Number of Extensions: 16380708405
Number of Successful Extensions: 525079134
Number of sequences better than 0.0: 0
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