BLASTX 7.6.2
Query= UN31742 /QuerySize=1093
(1092 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21560.1 | Symbols: VPS28-1 | VPS28-1 (VACUOLA... 376 2e-104
TAIR9_protein||AT4G21560.2 | Symbols: VPS28-1 | VPS28-1 (VACUOLA... 376 2e-104
TAIR9_protein||AT4G21560.3 | Symbols: VPS28-1 | VPS28-1 (VACUOLA... 376 2e-104
TAIR9_protein||AT4G05000.1 | Symbols: VPS28-2 | VPS28-2; transpo... 359 3e-099
TAIR9_protein||AT4G05000.2 | Symbols: VPS28-1 | VPS28-2; transpo... 359 3e-099
>TAIR9_protein||AT4G21560.1 | Symbols: VPS28-1 | VPS28-1 (VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter |
chr4:11469037-11469666 REVERSE
Length = 210
Score = 376 bits (963), Expect = 2e-104
Identities = 196/211 (92%), Positives = 203/211 (96%), Gaps = 3/211 (1%)
Frame = -2
Query: 815 IKLWNDKREREMYENFSELYAIIKSTEKLEKAYIRDLISPSQYETECQKLIVHFKTLSAT 636
+KLWNDKREREMYENF+ELYAIIK+TEKLEKAYIRDLISPS+YETECQKLIVHFKTLSA
Sbjct: 3 VKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSA- 61
Query: 635 TLKDSVPNIERFAETYKMDCSAAVYRLVTSGGVPATVEHRAAAVAASTSSSASVVAECVP 456
+LKD VPNIERFAETYKMDCSAAVYRLVTS GVPATVEHRAAA +ASTSSSASVVAECV
Sbjct: 62 SLKDMVPNIERFAETYKMDCSAAVYRLVTS-GVPATVEHRAAA-SASTSSSASVVAECVQ 119
Query: 455 NFITCMDSLKLNMVAVDQVYPLLSDLSASLGKLSILPPDFEGKVKMKEWLLRLSKMGASD 276
NFIT MDSLKLNMVAVDQVYPLLSDLSASL KLSILPPDFEGK+KMKEWLLRLSKMGASD
Sbjct: 120 NFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASD 179
Query: 275 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 183
ELTEQQARQLHFDLESSYNSFMAALPNAGN*
Sbjct: 180 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 210
>TAIR9_protein||AT4G21560.2 | Symbols: VPS28-1 | VPS28-1 (VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter |
chr4:11469037-11469666 REVERSE
Length = 210
Score = 376 bits (963), Expect = 2e-104
Identities = 196/211 (92%), Positives = 203/211 (96%), Gaps = 3/211 (1%)
Frame = -2
Query: 815 IKLWNDKREREMYENFSELYAIIKSTEKLEKAYIRDLISPSQYETECQKLIVHFKTLSAT 636
+KLWNDKREREMYENF+ELYAIIK+TEKLEKAYIRDLISPS+YETECQKLIVHFKTLSA
Sbjct: 3 VKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSA- 61
Query: 635 TLKDSVPNIERFAETYKMDCSAAVYRLVTSGGVPATVEHRAAAVAASTSSSASVVAECVP 456
+LKD VPNIERFAETYKMDCSAAVYRLVTS GVPATVEHRAAA +ASTSSSASVVAECV
Sbjct: 62 SLKDMVPNIERFAETYKMDCSAAVYRLVTS-GVPATVEHRAAA-SASTSSSASVVAECVQ 119
Query: 455 NFITCMDSLKLNMVAVDQVYPLLSDLSASLGKLSILPPDFEGKVKMKEWLLRLSKMGASD 276
NFIT MDSLKLNMVAVDQVYPLLSDLSASL KLSILPPDFEGK+KMKEWLLRLSKMGASD
Sbjct: 120 NFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASD 179
Query: 275 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 183
ELTEQQARQLHFDLESSYNSFMAALPNAGN*
Sbjct: 180 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 210
>TAIR9_protein||AT4G21560.3 | Symbols: VPS28-1 | VPS28-1 (VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter |
chr4:11469037-11469666 REVERSE
Length = 210
Score = 376 bits (963), Expect = 2e-104
Identities = 196/211 (92%), Positives = 203/211 (96%), Gaps = 3/211 (1%)
Frame = -2
Query: 815 IKLWNDKREREMYENFSELYAIIKSTEKLEKAYIRDLISPSQYETECQKLIVHFKTLSAT 636
+KLWNDKREREMYENF+ELYAIIK+TEKLEKAYIRDLISPS+YETECQKLIVHFKTLSA
Sbjct: 3 VKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSA- 61
Query: 635 TLKDSVPNIERFAETYKMDCSAAVYRLVTSGGVPATVEHRAAAVAASTSSSASVVAECVP 456
+LKD VPNIERFAETYKMDCSAAVYRLVTS GVPATVEHRAAA +ASTSSSASVVAECV
Sbjct: 62 SLKDMVPNIERFAETYKMDCSAAVYRLVTS-GVPATVEHRAAA-SASTSSSASVVAECVQ 119
Query: 455 NFITCMDSLKLNMVAVDQVYPLLSDLSASLGKLSILPPDFEGKVKMKEWLLRLSKMGASD 276
NFIT MDSLKLNMVAVDQVYPLLSDLSASL KLSILPPDFEGK+KMKEWLLRLSKMGASD
Sbjct: 120 NFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASD 179
Query: 275 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 183
ELTEQQARQLHFDLESSYNSFMAALPNAGN*
Sbjct: 180 ELTEQQARQLHFDLESSYNSFMAALPNAGN* 210
>TAIR9_protein||AT4G05000.1 | Symbols: VPS28-2 | VPS28-2; transporter |
chr4:2563953-2564585 FORWARD
Length = 211
Score = 359 bits (919), Expect = 3e-099
Identities = 185/214 (86%), Positives = 200/214 (93%), Gaps = 3/214 (1%)
Frame = -2
Query: 824 MEVIKLWNDKREREMYENFSELYAIIKSTEKLEKAYIRDLISPSQYETECQKLIVHFKTL 645
M +KLWNDKREREMYENF+EL+AIIK+TEKLEKAYIRDLI+PS+YE+ECQKLIVHFKTL
Sbjct: 1 MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTL 60
Query: 644 SATTLKDSVPNIERFAETYKMDCSAAVYRLVTSGGVPATVEHRAAAVAASTSSSASVVAE 465
SA TLKD+VPNIERFA+TYKMDC AA+YRLVTS G+PATVEHR A VAASTS+SAS+VAE
Sbjct: 61 SA-TLKDTVPNIERFADTYKMDCPAALYRLVTS-GLPATVEHR-ATVAASTSNSASIVAE 117
Query: 464 CVPNFITCMDSLKLNMVAVDQVYPLLSDLSASLGKLSILPPDFEGKVKMKEWLLRLSKMG 285
CV NFIT MDSLKLNMVAVDQVYPLLSDLSASL KLSILPPDFEGK KMKEWL RLSKMG
Sbjct: 118 CVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMG 177
Query: 284 ASDELTEQQARQLHFDLESSYNSFMAALPNAGN* 183
A+DELTEQQ+RQLHFDLESSYNSFMAALP AGN*
Sbjct: 178 AADELTEQQSRQLHFDLESSYNSFMAALPKAGN* 211
>TAIR9_protein||AT4G05000.2 | Symbols: VPS28-1 | VPS28-2; transporter |
chr4:2563953-2564585 FORWARD
Length = 211
Score = 359 bits (919), Expect = 3e-099
Identities = 185/214 (86%), Positives = 200/214 (93%), Gaps = 3/214 (1%)
Frame = -2
Query: 824 MEVIKLWNDKREREMYENFSELYAIIKSTEKLEKAYIRDLISPSQYETECQKLIVHFKTL 645
M +KLWNDKREREMYENF+EL+AIIK+TEKLEKAYIRDLI+PS+YE+ECQKLIVHFKTL
Sbjct: 1 MMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTL 60
Query: 644 SATTLKDSVPNIERFAETYKMDCSAAVYRLVTSGGVPATVEHRAAAVAASTSSSASVVAE 465
SA TLKD+VPNIERFA+TYKMDC AA+YRLVTS G+PATVEHR A VAASTS+SAS+VAE
Sbjct: 61 SA-TLKDTVPNIERFADTYKMDCPAALYRLVTS-GLPATVEHR-ATVAASTSNSASIVAE 117
Query: 464 CVPNFITCMDSLKLNMVAVDQVYPLLSDLSASLGKLSILPPDFEGKVKMKEWLLRLSKMG 285
CV NFIT MDSLKLNMVAVDQVYPLLSDLSASL KLSILPPDFEGK KMKEWL RLSKMG
Sbjct: 118 CVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMG 177
Query: 284 ASDELTEQQARQLHFDLESSYNSFMAALPNAGN* 183
A+DELTEQQ+RQLHFDLESSYNSFMAALP AGN*
Sbjct: 178 AADELTEQQSRQLHFDLESSYNSFMAALPKAGN* 211
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,716,169,283
Number of Sequences: 33410
Number of Extensions: 16716169283
Number of Successful Extensions: 535731132
Number of sequences better than 0.0: 0
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