BLASTX 7.6.2
Query= UN31927 /QuerySize=1053
(1052 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 74 1e-013
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 71 1e-012
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 69 4e-012
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 68 8e-012
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 74 bits (180), Expect = 1e-013
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = -1
Query: 953 LELND-GSDAEIRKSSIRRISVEGYDTSLRMEDVDEALRKHFASCGKIIHVSIPRNNEET 777
L+LN+ G+++ + +ISVEGYDT LR V L KHFASCGKI H+ +PR+ E
Sbjct: 12 LQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERG 71
Query: 776 ILCKYAFVYF-NEEDEEKALRLDGRDMGG 693
IL AF+ E EEKAL L G D GG
Sbjct: 72 ILKSVAFMCIKGEGGEEKALLLSGTDAGG 100
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 71 bits (172), Expect = 1e-012
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Frame = -1
Query: 953 LELNDGSDAEIRKSSIRRISVEGYDTSLRMEDVDEALRKHFASCGKIIHVSIPRNNEETI 774
LELND ++S+ I VEGYDTSL+ + AL KHFASCG+I + +PR+ ++ I
Sbjct: 12 LELNDSD----KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKI 67
Query: 773 LCKYAFVYFNEED-EEKALRLDGRDMGG 693
L +F++ E E+KAL+L G D+GG
Sbjct: 68 LKSVSFMWIKGEGAEDKALQLSGTDVGG 95
Score = 63 bits (152), Expect = 2e-010
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -1
Query: 914 SSIRRISVEGYDTSLRMEDVDEALRKHFASCGKIIHVSIPRNNEETILCKYAFVYFNEED 735
S I ISVEGYDTSL+ ++ L KHF SCG+I HV +P + E +L AF+ E
Sbjct: 110 SPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEG 169
Query: 734 -EEKALRLDGRDMGG 693
E+KAL+L G D+ G
Sbjct: 170 AEDKALQLSGTDVVG 184
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 69 bits (167), Expect = 4e-012
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Frame = -1
Query: 956 GLELNDGSDAEIRKSSIRRISVEGYDTSLRMEDVDEALRKHFASCGKIIHVSIPRNNEET 777
GLE D ++ + +ISVEGYDTS+ + AL KHFASCGKI+ + +PR+ ++
Sbjct: 8 GLESKDTNN----RKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKR 63
Query: 776 ILCKYAFVYFNEEDEE----KALRLDGRDMGG 693
IL F+ F+ ++ E KAL L G D+GG
Sbjct: 64 ILKSPLFIIFHAKEGESPVDKALELSGTDVGG 95
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 68 bits (165), Expect = 8e-012
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = -1
Query: 956 GLELNDGSDAEIRKSSIRRISVEGYDTSLRMEDVDEALRKHFASCGKIIHVSIPRNNEET 777
GLE+ +IR S I RISV GYD L E V+ L+K F+ CG+I V IP +
Sbjct: 8 GLEVK--RSRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSS 65
Query: 776 ILCKYAFVYF-NEEDEEKALRLDGRDMGG 693
L +AF+YF E +KAL+L+G DMGG
Sbjct: 66 -LWSHAFIYFVGEGTADKALQLNGSDMGG 93
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,804,901,557
Number of Sequences: 33410
Number of Extensions: 16804901557
Number of Successful Extensions: 540859793
Number of sequences better than 0.0: 0
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