BLASTX 7.6.2
Query= UN32207 /QuerySize=867
(866 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34357.1 | Symbols: | binding | chr2:14499236... 67 2e-011
TAIR9_protein||AT3G25990.1 | Symbols: | DNA-binding protein GT-... 60 1e-009
TAIR9_protein||AT1G13450.2 | Symbols: | DNA binding protein GT-... 53 2e-007
TAIR9_protein||AT1G13450.1 | Symbols: | DNA binding protein GT-... 53 3e-007
TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (... 48 8e-006
TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (... 48 8e-006
>TAIR9_protein||AT2G34357.1 | Symbols: | binding | chr2:14499236-14505555
FORWARD
Length = 1281
Score = 67 bits (161), Expect = 2e-011
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 6/55 (10%)
Frame = +2
Query: 422 ALRLVLSVLRLRSATPECLVSGLKCLVHLFTTVGSMMGNK------ILKSIIRHN 568
ALRLVL+VLRL+SATPECL+SGLKCLVHL TTV S+M N+ IL + + H+
Sbjct: 117 ALRLVLNVLRLKSATPECLISGLKCLVHLLTTVESIMVNEGSDSYNILLNFVTHS 171
>TAIR9_protein||AT3G25990.1 | Symbols: | DNA-binding protein GT-1-related |
chr3:9504846-9506703 REVERSE
Length = 373
Score = 60 bits (145), Expect = 1e-009
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -2
Query: 280 GGDGQPFLGKIITMKYEDYTRRVGIDGTAEAIKKKLK 170
G DGQPF G+IIT+K+ DYTRRVGIDGTAEAIK+ ++
Sbjct: 231 GVDGQPFAGRIITVKFGDYTRRVGIDGTAEAIKEAIR 267
>TAIR9_protein||AT1G13450.2 | Symbols: | DNA binding protein GT-1 |
chr1:4612999-4615115 REVERSE
Length = 362
Score = 53 bits (126), Expect = 2e-007
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Frame = -2
Query: 313 FSSNMVSCYVAGGD---GQPFLGKIITMKYEDYTRRVGIDGTAEAIKKKLK 170
F +S GD GQPF G++IT+K+ DYTRR+G+DG+AEAIK+ ++
Sbjct: 207 FDDTSISFGSVEGDDSHGQPFGGRVITVKFGDYTRRIGVDGSAEAIKEVIR 257
>TAIR9_protein||AT1G13450.1 | Symbols: | DNA binding protein GT-1 |
chr1:4612999-4615115 REVERSE
Length = 407
Score = 53 bits (125), Expect = 3e-007
Identities = 21/34 (61%), Positives = 31/34 (91%)
Frame = -2
Query: 271 GQPFLGKIITMKYEDYTRRVGIDGTAEAIKKKLK 170
GQPF G++IT+K+ DYTRR+G+DG+AEAIK+ ++
Sbjct: 269 GQPFGGRVITVKFGDYTRRIGVDGSAEAIKEVIR 302
>TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 48 bits (112), Expect = 8e-006
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 701 LFIRGLAAETTTEGLRSLFSAYGD 772
LFIRGLAA+TTTEGLRSLFS+YGD
Sbjct: 77 LFIRGLAADTTTEGLRSLFSSYGD 100
>TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 48 bits (112), Expect = 8e-006
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 701 LFIRGLAAETTTEGLRSLFSAYGD 772
LFIRGLAA+TTTEGLRSLFS+YGD
Sbjct: 77 LFIRGLAADTTTEGLRSLFSSYGD 100
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,980,163,241
Number of Sequences: 33410
Number of Extensions: 16980163241
Number of Successful Extensions: 551176264
Number of sequences better than 0.0: 0
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