BLASTX 7.6.2
Query= UN32276 /QuerySize=729
(728 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118197466|gb|ABK78696.1| DNA binding protein [Brassica rapa] 252 5e-065
gi|297852478|ref|XP_002894120.1| T1N15.24 [Arabidopsis lyrata su... 176 3e-042
gi|18402291|ref|NP_564531.1| AT hook motif-containing protein [A... 171 1e-040
gi|42571809|ref|NP_973995.1| AT hook motif-containing protein [A... 131 1e-028
gi|8778701|gb|AAF79709.1|AC020889_17 T1N15.24 [Arabidopsis thali... 107 3e-021
gi|303271073|ref|XP_003054898.1| predicted protein [Micromonas p... 58 1e-006
gi|1708262|sp|Q10370.1|HMGYB_SOYBN RecName: Full=HMG-Y-related p... 56 4e-006
>gi|118197466|gb|ABK78696.1| DNA binding protein [Brassica rapa]
Length = 185
Score = 252 bits (642), Expect = 5e-065
Identities = 150/190 (78%), Positives = 157/190 (82%), Gaps = 22/190 (11%)
Frame = -1
Query: 629 PPPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHPNGAVS---ARKPSGRPKRNAT 459
PPPPAPA D SPA + SQKRGRGRPPKSKSD GAVS ARKPSGRP+RN
Sbjct: 13 PPPPAPA------DASPAANDSQKRGRGRPPKSKSD----GAVSAQPARKPSGRPRRN-- 60
Query: 458 AVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT-GSRKRGRPKRDDVAAAAPAKKRGR 282
AA VPA AA VKSGRGRP+ S+T ATES VT GSRKRGRPK+DDV AAAPAKKRGR
Sbjct: 61 --AAVVPA--AAVVKSGRGRPKRSSTVAATESQVTPGSRKRGRPKKDDV-AAAPAKKRGR 115
Query: 281 KPKTEQVAKQRTSNRTRKA-TEATTGQGAADPKEFKKKAALLQKKVKQAADKLKIAVSAI 105
KPKTEQVAKQRTSNRTRKA TEATTG GAADP+E+KKKAALLQKKVKQAADKLKIAVSAI
Sbjct: 116 KPKTEQVAKQRTSNRTRKATTEATTGHGAADPREYKKKAALLQKKVKQAADKLKIAVSAI 175
Query: 104 EEVQKIADGM 75
EEVQKIAD M
Sbjct: 176 EEVQKIADAM 185
Score = 247 bits (629), Expect = 2e-063
Identities = 147/190 (77%), Positives = 155/190 (81%), Gaps = 23/190 (12%)
Frame = -1
Query: 647 ADENNPPPPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHPNGAVS---ARKPSGR 477
A +NNPPPP AP D SPA + SQKRGRGRPPKSKSD GAVS ARKPSGR
Sbjct: 8 AADNNPPPP-------APADASPAANDSQKRGRGRPPKSKSD----GAVSAQPARKPSGR 56
Query: 476 PKRNATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT-GSRKRGRPKRDDVAAAAP 300
P+RN AA VPA AA VKSGRGRP+ S+T ATES VT GSRKRGRPK+DDV AAAP
Sbjct: 57 PRRN----AAVVPA--AAVVKSGRGRPKRSSTVAATESQVTPGSRKRGRPKKDDV-AAAP 109
Query: 299 AKKRGRKPKTEQVAKQRTSNRTRKA-TEATTGQGAADPKEFKKKAALLQKKVKQAADKLK 123
AKKRGRKPKTEQVAKQRTSNRTRKA TEATTG GAADP+E+KKKAALLQKKVKQAADKLK
Sbjct: 110 AKKRGRKPKTEQVAKQRTSNRTRKATTEATTGHGAADPREYKKKAALLQKKVKQAADKLK 169
Query: 122 IAVSAIEEVQ 93
IAVSAIEEVQ
Sbjct: 170 IAVSAIEEVQ 179
>gi|297852478|ref|XP_002894120.1| T1N15.24 [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 176 bits (445), Expect = 3e-042
Identities = 114/214 (53%), Positives = 135/214 (63%), Gaps = 18/214 (8%)
Frame = -1
Query: 689 MARSDTSPAALGSDADENNPP-PPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHP 513
MA++ ++ GS+A + P P PT S + SQKRGRGRPPK+KSDS
Sbjct: 1 MAKTASTHPGSGSEASRSGTPGDASGNKPQTDPTGVSATDTASQKRGRGRPPKAKSDSTQ 60
Query: 512 NGAVSAR---KPSGRPKRNATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT---- 354
NGAVSA+ KPSGRPKRN VA AVP S AA RGR + S T SVVT
Sbjct: 61 NGAVSAKASTKPSGRPKRN---VAPAVPTTSVAAAVKSRGRAKRST---VTASVVTTATG 114
Query: 353 -GSRKRGRPKRDDVAAAAPAKKRGRKPKTEQVAKQRTSNRTRKATEATTGQGAADPKEFK 177
GSRKRGRPK+DDV APA KRGRKP E VA + + TRK+T + AA+ + K
Sbjct: 115 EGSRKRGRPKKDDV--GAPANKRGRKPNVEAVAAKPVRSSTRKST-SVAAPVAANLGDLK 171
Query: 176 KKAALLQKKVKQAADKLKIAVSAIEEVQKIADGM 75
KK LLQKKVK+AA KLK AV+AI+EVQK+ADGM
Sbjct: 172 KKTTLLQKKVKEAAAKLKQAVTAIDEVQKLADGM 205
>gi|18402291|ref|NP_564531.1| AT hook motif-containing protein [Arabidopsis
thaliana]
Length = 212
Score = 171 bits (432), Expect = 1e-040
Identities = 113/219 (51%), Positives = 136/219 (62%), Gaps = 21/219 (9%)
Frame = -1
Query: 689 MARSDTSPAALGSDADENNPP-PPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHP 513
MA++ +P A GS+ + P P T S + SQKRGRGRPPK+KSDS
Sbjct: 1 MAKTALTPPASGSEVPRSGTPGDASGNKPQTDATGVSATDTASQKRGRGRPPKAKSDSSQ 60
Query: 512 NGAVSAR---KPSGRPKRNATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT--GS 348
GAVSA+ KPSGRPKRN VA AVP+ S AA RGR + S A + T GS
Sbjct: 61 IGAVSAKASTKPSGRPKRN---VAQAVPSTSVAAAVKKRGRAKRSTVTAAVVTTATGEGS 117
Query: 347 RKRGRPKRDDVAAA--------APAKKRGRKPKTEQVAKQRTSNRTRKATEATTGQGAAD 192
RKRGRPK+DDVAAA APAK+RGRKP E A + RTRK+T + AA+
Sbjct: 118 RKRGRPKKDDVAAATVPAETVVAPAKRRGRKPTVEVAA--QPVRRTRKST--SVAPVAAN 173
Query: 191 PKEFKKKAALLQKKVKQAADKLKIAVSAIEEVQKIADGM 75
+ KK+ ALLQKKVK+AA KLK AV+AI+EVQK+ADGM
Sbjct: 174 VGDLKKRTALLQKKVKEAAAKLKQAVTAIDEVQKLADGM 212
>gi|42571809|ref|NP_973995.1| AT hook motif-containing protein [Arabidopsis
thaliana]
Length = 198
Score = 131 bits (328), Expect = 1e-028
Identities = 91/191 (47%), Positives = 110/191 (57%), Gaps = 21/191 (10%)
Frame = -1
Query: 689 MARSDTSPAALGSDADENNPP-PPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHP 513
MA++ +P A GS+ + P P T S + SQKRGRGRPPK+KSDS
Sbjct: 1 MAKTALTPPASGSEVPRSGTPGDASGNKPQTDATGVSATDTASQKRGRGRPPKAKSDSSQ 60
Query: 512 NGAVSAR---KPSGRPKRNATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT--GS 348
GAVSA+ KPSGRPKRN VA AVP+ S AA RGR + S A + T GS
Sbjct: 61 IGAVSAKASTKPSGRPKRN---VAQAVPSTSVAAAVKKRGRAKRSTVTAAVVTTATGEGS 117
Query: 347 RKRGRPKRDDVAAA--------APAKKRGRKPKTEQVAKQRTSNRTRKATEATTGQGAAD 192
RKRGRPK+DDVAAA APAK+RGRKP E A + RTRK+T + AA+
Sbjct: 118 RKRGRPKKDDVAAATVPAETVVAPAKRRGRKPTVEVAA--QPVRRTRKST--SVAPVAAN 173
Query: 191 PKEFKKKAALL 159
+ KK+ ALL
Sbjct: 174 VGDLKKRTALL 184
>gi|8778701|gb|AAF79709.1|AC020889_17 T1N15.24 [Arabidopsis thaliana]
Length = 464
Score = 107 bits (265), Expect = 3e-021
Identities = 68/134 (50%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Frame = -1
Query: 689 MARSDTSPAALGSDADENNPP-PPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHP 513
MA++ +P A GS+ + P P T S + SQKRGRGRPPK+KSDS
Sbjct: 1 MAKTALTPPASGSEVPRSGTPGDASGNKPQTDATGVSATDTASQKRGRGRPPKAKSDSSQ 60
Query: 512 NGAVSAR---KPSGRPKRNATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVT--GS 348
GAVSA+ KPSGRPKRN VA AVP+ S AA RGR + S A + T GS
Sbjct: 61 IGAVSAKASTKPSGRPKRN---VAQAVPSTSVAAAVKKRGRAKRSTVTAAVVTTATGEGS 117
Query: 347 RKRGRPKRDDVAAA 306
RKRGRPK+DDVAAA
Sbjct: 118 RKRGRPKKDDVAAA 131
Score = 70 bits (169), Expect = 3e-010
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 10/85 (11%)
Frame = -1
Query: 305 APAKKRGRKPKTEQVAKQRTSNRTRKA--------TEATTGQGAADPKEFKKKAALLQKK 150
APAK+RGRKP E A + RTRK + AA+ + KK+ ALLQKK
Sbjct: 140 APAKRRGRKPTVEVAA--QPVRRTRKVFGFSMHEQKSTSVAPVAANVGDLKKRTALLQKK 197
Query: 149 VKQAADKLKIAVSAIEEVQKIADGM 75
VK+AA KLK AV+AI+EVQK+ADG+
Sbjct: 198 VKEAAAKLKQAVTAIDEVQKLADGI 222
>gi|303271073|ref|XP_003054898.1| predicted protein [Micromonas pusilla
CCMP1545]
Length = 727
Score = 58 bits (139), Expect = 1e-006
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 7/151 (4%)
Frame = -1
Query: 641 ENNPPPPPAPAPALAPTDGSPAGSGSQKRGRGRPPKSKSDSHP--NGAVSARKPSGRPKR 468
+ P PP A +G+ KRGRGRPPK+ + + P A++ GRP
Sbjct: 521 KKKPGRPPGAKNKATKVAAEAAAAGTPKRGRGRPPKAAATTTPATTTPTPAKRGRGRPPG 580
Query: 467 NATAVAAAVPAASAAAVKSGRGRPRWSNTQPATESVVTGSRKRGRPKRDDVAAAAPAKKR 288
+A AAA PA +A K RGRP + PA G+ + KKR
Sbjct: 581 SANKAAAATPATTAG--KKPRGRPPKTPKTPAAVGPEDDDVPLGQLA---AKVTSTQKKR 635
Query: 287 GRKPKTEQVAKQRTSNRTRKATEATTGQGAA 195
GR P ++ A + ++ +A + AA
Sbjct: 636 GRPPGSKNKATAAAAAKSPRAAPKVSTPTAA 666
>gi|1708262|sp|Q10370.1|HMGYB_SOYBN RecName: Full=HMG-Y-related protein B;
AltName: Full=Protein SB16B
Length = 152
Score = 56 bits (134), Expect = 4e-006
Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -1
Query: 560 KRGRGRPPKSKSDSHPNGAVSARKPSGRPKRNATAVAAAVPAASAAAVKSGRGRPRWSNT 381
KRGRGRPPK K P VS +P GRP ++ A + A + A RGRP+
Sbjct: 60 KRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNAPPKSPKAKATPATGRPRGRPKKVAR 119
Query: 380 QPATES--VVTGSRKRGRPKR 324
PA S V+ R RGRP +
Sbjct: 120 SPAVPSPTAVSTGRPRGRPPK 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,727,591,300,389
Number of Sequences: 15229318
Number of Extensions: 3727591300389
Number of Successful Extensions: 875040419
Number of sequences better than 0.0: 0
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