BLASTX 7.6.2
Query= UN32640 /QuerySize=1208
(1207 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabi... 651 9e-185
gi|14334958|gb|AAK59656.1| putative spliceosome associated prote... 650 2e-184
gi|21593441|gb|AAM65408.1| putative spliceosome associated prote... 646 3e-183
gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT... 645 5e-183
gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis ... 602 5e-170
gi|255550690|ref|XP_002516394.1| spliceosome associated protein,... 523 4e-146
gi|225430808|ref|XP_002271291.1| PREDICTED: hypothetical protein... 522 8e-146
gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare ... 489 4e-136
gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japo... 476 5e-132
gi|308081546|ref|NP_001183096.1| hypothetical protein LOC1005014... 475 6e-132
gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT... 470 2e-130
gi|212274429|ref|NP_001130902.1| hypothetical protein LOC1001920... 469 6e-130
gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryz... 461 1e-127
gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrel... 447 2e-123
gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vini... 430 2e-118
gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing facto... 415 1e-113
gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, ... 386 4e-105
gi|73981537|ref|XP_540295.2| PREDICTED: similar to splicing fact... 377 2e-102
gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B s... 377 2e-102
gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo s... 376 5e-102
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis
thaliana]
Length = 363
Score = 651 bits (1678), Expect = 9e-185
Identities = 318/364 (87%), Positives = 333/364 (91%), Gaps = 8/364 (2%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+ATVYVGGLD QLSEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH YGFIE+RSEEDADYAIKVLNMIK+HGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG +ASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAIE+MTGQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPP-TAPQANGIPRP 447
NRQITVSYAYKKDTKGERHGTPAERLLAATNP AQKSRPHTLFA GPP +APQ NG+PRP
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGLPRP 240
Query: 446 FANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPP 267
FANG MQPVPIP PR PPPPPPQVYQ QPPSW QP QQH + VPPPMQ+RPPQGMPP
Sbjct: 241 FANGSMQPVPIPAPR-QPPPPPPQVYQTQPPSWPSQP--QQHSM-VPPPMQFRPPQGMPP 296
Query: 266 PPPPQFFHHQQGFGGPR-PPPPQAMGMNQH-GWPPQHM-QQGGPSPPQQPMHLHHHMFMP 96
PPPPQF +HQQGFGGPR PPPPQAMGM+QH GWPPQHM QQGGP QQP + HHHM MP
Sbjct: 297 PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPPYQHHHMSMP 356
Query: 95 PPPP 84
PPPP
Sbjct: 357 PPPP 360
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis
thaliana]
Length = 363
Score = 650 bits (1675), Expect = 2e-184
Identities = 317/364 (87%), Positives = 333/364 (91%), Gaps = 8/364 (2%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+ATVYVGGLD QLSEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH YGFIE+RSEEDADYAIKVLNMIK+HGKP+RVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPMRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG +ASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAIE+MTGQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPP-TAPQANGIPRP 447
NRQITVSYAYKKDTKGERHGTPAERLLAATNP AQKSRPHTLFA GPP +APQ NG+PRP
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGLPRP 240
Query: 446 FANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPP 267
FANG MQPVPIP PR PPPPPPQVYQ QPPSW QP QQH + VPPPMQ+RPPQGMPP
Sbjct: 241 FANGSMQPVPIPAPR-QPPPPPPQVYQTQPPSWPSQP--QQHSM-VPPPMQFRPPQGMPP 296
Query: 266 PPPPQFFHHQQGFGGPR-PPPPQAMGMNQH-GWPPQHM-QQGGPSPPQQPMHLHHHMFMP 96
PPPPQF +HQQGFGGPR PPPPQAMGM+QH GWPPQHM QQGGP QQP + HHHM MP
Sbjct: 297 PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPPYQHHHMSMP 356
Query: 95 PPPP 84
PPPP
Sbjct: 357 PPPP 360
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis
thaliana]
Length = 363
Score = 646 bits (1665), Expect = 3e-183
Identities = 316/364 (86%), Positives = 332/364 (91%), Gaps = 8/364 (2%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTT IAPGVGANLLGQHSAERNQ+ATVYVGGLD QLSEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTLIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH YGFIE+RSEEDADYAIKVLNMIK+HGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG +ASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAIE+MTGQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPP-TAPQANGIPRP 447
NRQITVSYAYKKDTKGERHGTPAERLLAATNP AQKSRPHTLFA GPP +APQ NG+PRP
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGLPRP 240
Query: 446 FANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPP 267
FANG MQPVPIP PR PPPPPPQVYQ QPPSW QP QQH + VPPPMQ+RPPQGMPP
Sbjct: 241 FANGSMQPVPIPAPR-QPPPPPPQVYQTQPPSWPSQP--QQHSM-VPPPMQFRPPQGMPP 296
Query: 266 PPPPQFFHHQQGFGGPR-PPPPQAMGMNQH-GWPPQHM-QQGGPSPPQQPMHLHHHMFMP 96
PPPPQF +HQQGFGGPR PPPPQAMGM+QH GWPPQHM QQGGP QQP + +HHM MP
Sbjct: 297 PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPPYQYHHMSMP 356
Query: 95 PPPP 84
PPPP
Sbjct: 357 PPPP 360
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 645 bits (1663), Expect = 5e-183
Identities = 316/365 (86%), Positives = 329/365 (90%), Gaps = 9/365 (2%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+ATVYVG LD QLSEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH YGFIE+RSEEDADYAIKVLNMIK+HGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKVHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG +ASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAIEAMTGQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPT-APQANGIPRP 447
NRQITVSYAYKKDTKGERHGTPAERLLAATNP AQKSRPHTLFASGPP+ APQ NG+PRP
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPSAQKSRPHTLFASGPPSNAPQVNGLPRP 240
Query: 446 FANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPP 267
FANG MQP PIP PR PPPPPPQVYQ QPPSW QP QQ V PPMQ+RPPQGMPP
Sbjct: 241 FANGSMQPAPIPAPR-QPPPPPPQVYQTQPPSWPSQPQQQGF---VSPPMQFRPPQGMPP 296
Query: 266 PPPPQFFHHQQGFGGPR-PPPPQAMGMNQH-GWPPQHMQQGGPSPPQQ--PMHLHHHMFM 99
PPPPQF +HQQGFGGPR PPPPQAMGM+QH GWPPQHMQQ G PPQQ P + HHHM M
Sbjct: 297 PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPPQQQPPPYQHHHMSM 356
Query: 98 PPPPP 84
PPPPP
Sbjct: 357 PPPPP 361
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 365
Score = 602 bits (1551), Expect = 5e-170
Identities = 294/371 (79%), Positives = 324/371 (87%), Gaps = 12/371 (3%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
M+TRI PGVGANLLGQH+ ERNQ+AT+YVG L PQLSE+LL ELFVQ+GPVV+V++PKD+
Sbjct: 1 MSTRITPGVGANLLGQHATERNQDATIYVGNLSPQLSEDLLLELFVQAGPVVSVFIPKDK 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT L +GF++FR+EEDADYAIKV NMIK++G+PIRV KASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLQQTFGFVQFRNEEDADYAIKVYNMIKLYGEPIRVKKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG VA +PKIMRDPDTGN RGFGFISYDSF+ASDAAIEAM+GQYL
Sbjct: 121 PDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPT---APQANGIP 453
+RQITVSYAYKKDTKGERHGT AERLLAATNP +Q+SRPHTLFASGP T AP+ NG+P
Sbjct: 181 SRQITVSYAYKKDTKGERHGTQAERLLAATNPSSQRSRPHTLFASGPSTQINAPKVNGLP 240
Query: 452 RPFANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAV-PPPMQYRPPQG 276
RPFANGGMQPVPIP P PPPPPQVYQ QPPSW QP QQHGL V PPPMQ+RPPQG
Sbjct: 241 RPFANGGMQPVPIPAPH---PPPPPQVYQTQPPSWPSQP--QQHGLVVPPPPMQFRPPQG 295
Query: 275 M-PPPPPPQFFHHQQGFGGPRPPPP-QAMGMNQHGWPPQHMQQGGPSPPQQPMHLHHHMF 102
M P PPPPQF HHQQGFG PRPPPP QAMGM+QHGWP QH+QQG P P Q PMH HHHM
Sbjct: 296 MQPQPPPPQFHHHQQGFGVPRPPPPYQAMGMHQHGWPLQHIQQGVPPPQQLPMHHHHHMS 355
Query: 101 MPPPPPPPHQG 69
+ PPPPPPHQG
Sbjct: 356 I-PPPPPPHQG 365
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative
[Ricinus communis]
Length = 376
Score = 523 bits (1345), Expect = 4e-146
Identities = 272/380 (71%), Positives = 293/380 (77%), Gaps = 33/380 (8%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK++NMIK+ GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+L+DTFSAFG + +NPKIMRDP+TGNSRGFGFISYDSFDASDAAIEAM GQYLC
Sbjct: 121 PDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPT---APQANGI- 456
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP +QKSRPHTLFASGPPT PQANG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTV 240
Query: 455 -----PRPFANGGMQPVPIPGPRPTPPP----PPPQVYQIQPPSWQFQPHQ----QQHGL 315
PRPFANG + P P+P RP+ PP PP QV P+WQ QP Q +
Sbjct: 241 GAPVPPRPFANGAVPPGPVPPLRPSAPPTAAFPPMQV--AGQPAWQGQPPQPGQVMPPQV 298
Query: 314 AVPPPMQYRPPQGMPPPPPPQFFHHQQGFGGPRPPPPQAMGMNQHGW--PPQHMQQGGPS 141
PPPMQ+RPP PPPPPQ PRPP P MGM Q W PP Q G
Sbjct: 299 MPPPPMQFRPPPPNMPPPPPQVAQVL-----PRPPQPMGMGMQQQVWRQPPPPQQLAGGP 353
Query: 140 PPQQPMHLHHHMFMPPPPPP 81
P QQ M M PPPPP
Sbjct: 354 PMQQ-------MMMQPPPPP 366
>gi|225430808|ref|XP_002271291.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 373
Score = 522 bits (1342), Expect = 8e-146
Identities = 277/388 (71%), Positives = 297/388 (76%), Gaps = 38/388 (9%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ++EELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIKVLNMIK++GKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDPDTGNSRGFGF+SYDSF+ASDAAIEAM GQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPT---APQANG-- 459
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP A KSRPHTLFASGPPT PQANG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 240
Query: 458 ----IPRPFANGGMQPVPIPGPRPTPPP----PPPQVYQIQPPSWQFQPHQ----QQHGL 315
PRPFANG + PVPIP RP PP PP Q+ PPSWQ QP Q Q +
Sbjct: 241 GAPMPPRPFANGVVPPVPIPAMRPPPPQSGAFPPMQL--AGPPSWQGQPQQPGQPMQPPM 298
Query: 314 AVPPPM-QYRPPQGMPPPPPPQFFHHQQGFGGPRPPPPQAMGMNQHGWPPQHMQQGGPSP 138
PPP+ Q+RPP PPPP Q Q P PPPP MG W P P P
Sbjct: 299 MPPPPLQQFRPPPPSMPPPPQQV---MQALSRP-PPPPALMGGPPPVWRP-------PPP 347
Query: 137 PQQ-----PMHLHHHMFMPPPPPPPHQG 69
PQQ P L M MPPPPPPP G
Sbjct: 348 PQQLAGRPPTML--QMSMPPPPPPPAAG 373
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 368
Score = 489 bits (1258), Expect = 4e-136
Identities = 258/382 (67%), Positives = 281/382 (73%), Gaps = 36/382 (9%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK+LNM+K++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
P+VDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SYDSF++SD AIEAM Q+LC
Sbjct: 121 PEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG----- 459
NR ITVSYAYKKDTKGERHGTPAERLLAA NP +QK RPHT+FA+ PPT NG
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKHRPHTMFATAPPTQGLQNGGVGAP 240
Query: 458 IPRPFANGGMQPVPIPGPRPTPPPPPPQVYQIQP------PSWQFQPHQQQHGLAVPPPM 297
+PRPFANG +PG PPPP V Q P P+W P Q VPPPM
Sbjct: 241 VPRPFANGN-----VPGQMQHVRPPPPPVGQYPPMQMHGQPAWPGPPQNMQQ---VPPPM 292
Query: 296 ----QYRPPQGMPPP----PPPQFFHHQQGFGGPRPPPPQAMGMNQHGW-PPQHMQQGGP 144
QYR P GMPPP PPPQ RPPPP W PP QQGG
Sbjct: 293 QQQLQYRLP-GMPPPQNMMPPPQNMMPPPPHHMSRPPPPPPNMQAPPMWRPPPPPQQGGG 351
Query: 143 SPPQQPMHLHHHMFMPPPPPPP 78
PP M MPPPPPPP
Sbjct: 352 MPPPP-------MSMPPPPPPP 366
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
Length = 355
Score = 476 bits (1223), Expect = 5e-132
Identities = 248/357 (69%), Positives = 272/357 (76%), Gaps = 21/357 (5%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK+LNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SYDSF++SD AIEAM Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG--IPR 450
NR ITVSYAYKKDTKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT ANG +PR
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGLANGAPVPR 240
Query: 449 PFANGGMQPVPIPGPRPTPPPP---PPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQ 279
PF+NG + P I RP PPP PP QP + P Q +PP M YRP
Sbjct: 241 PFSNGAVPP-QIQHVRPPPPPMQQFPPMQMNGQP---VWPPQNTQLPPHMPPQMHYRPAV 296
Query: 278 GMPPP---PPPQFFHHQQGFGGPRPPPPQAMGMNQHGW--PPQHMQQGGPSPPQQPM 123
PPP PPP G RPPPP + W PP Q GG PP M
Sbjct: 297 RPPPPNMMPPPP-------LGMVRPPPPPSSMPAPPMWRPPPPPQQAGGMPPPPMSM 346
>gi|308081546|ref|NP_001183096.1| hypothetical protein LOC100501457 [Zea mays]
Length = 359
Score = 475 bits (1222), Expect = 6e-132
Identities = 256/380 (67%), Positives = 279/380 (73%), Gaps = 47/380 (12%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MT RIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTIRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK+LNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SY+SF++SD AIEAM Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG---IP 453
NR ITVSYAYKKDTKGERHGTPAERLLA+ NP +QK+RPHT+FASGPPT NG +P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLASNNPGSQKNRPHTMFASGPPTQGLPNGGPPVP 240
Query: 452 RPFANGGMQPVPIPG--PRPTPPPPPPQVYQIQPPSWQFQPHQQ-----QHGLAVPPPM- 297
RPF NG IPG PPPPP V Q PP Q H Q QH ++PP M
Sbjct: 241 RPFGNG-----TIPGQIQHIRQPPPPPPVGQFPPP---MQMHGQPAWPAQH--SMPPHMS 290
Query: 296 ---QYRPPQGMPPP---PPPQFFHHQQGFGGPRPPPPQAMGMNQHGW----PPQHMQQGG 147
QYR P PPP PPP G RPPPP H W PP QQGG
Sbjct: 291 SQLQYRLPMRPPPPNMMPPP--------VGMVRPPPPPTGMSAPHMWMPPPPPPSSQQGG 342
Query: 146 PSPPQQPMHLHHHMFMPPPP 87
PP M MPPPP
Sbjct: 343 MPPPP--------MSMPPPP 354
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190
[Sorghum bicolor]
Length = 355
Score = 470 bits (1209), Expect = 2e-130
Identities = 249/363 (68%), Positives = 273/363 (75%), Gaps = 32/363 (8%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK+LNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SYDSF++SD AIEAM Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG---IP 453
NR ITVSYAYKKDTKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT NG +P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGLPNGGPPVP 240
Query: 452 RPFANGGMQPVPIPGPRPTPPPP----PPQVYQIQPPSWQFQPHQQQHGLAVPPPM---- 297
RP+ NG + P I R PPPP PP + P+W P QQ +PPPM
Sbjct: 241 RPYGNGTI-PGQIQHMRQPPPPPVGQFPPPMQMHGQPAW---PAQQ----PMPPPMASQL 292
Query: 296 QYRPPQGMPPP---PPPQFFHHQQGFGGPRPPPPQAMGMNQHGW--PPQHMQQGGPSPPQ 132
QYR P PPP PPP RPPPP W PP QQGG PP
Sbjct: 293 QYRLPMRPPPPNMMPPP--------VSMVRPPPPPTGMSAPPMWIPPPPPPQQGGMPPPP 344
Query: 131 QPM 123
M
Sbjct: 345 MSM 347
>gi|212274429|ref|NP_001130902.1| hypothetical protein LOC100192006 [Zea mays]
Length = 357
Score = 469 bits (1205), Expect = 6e-130
Identities = 251/378 (66%), Positives = 273/378 (72%), Gaps = 49/378 (12%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK LNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SY+SF++SD AIEAM Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG---IP 453
NR ITVSYAYKKDTKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT NG +P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGHPNGGPPVP 240
Query: 452 RPFANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGL-------AVPPPM- 297
RP+ NG IPG PPP PP QF P Q HG ++PPPM
Sbjct: 241 RPYGNG-----TIPGQIQHIRQPPP------PPVGQFPPPMQMHGQPTWPAQHSMPPPMP 289
Query: 296 ---QYRPPQGMPPP---PPPQFFHHQQGFGGPRPPPPQAMGMNQHGW----PPQHMQQGG 147
QYR P PPP PPP G RPPPP W PP H G
Sbjct: 290 SQLQYRLPMRPPPPNMMPPP--------VGMVRPPPPPTGMSAPPMWMPPPPPPHQGGGM 341
Query: 146 PSPPQQPMHLHHHMFMPP 93
P PP M MPP
Sbjct: 342 PPPP---------MSMPP 350
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa
Japonica Group]
Length = 391
Score = 461 bits (1186), Expect = 1e-127
Identities = 235/315 (74%), Positives = 260/315 (82%), Gaps = 20/315 (6%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIK+LNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDP+TGNSRGFGF+SYDSF++SD AIEAM Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANG--IPR 450
NR ITVSYAYKKDTKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT ANG +PR
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGLANGAPVPR 240
Query: 449 PFANGGMQPVPIPGPRPTPPP----PPPQV--YQIQPP-SWQFQPHQQQHGLAVPPPMQY 291
PF+NG + P I RP PPP PP Q+ + PP + Q PH +PP M Y
Sbjct: 241 PFSNGAVPP-QIQHVRPPPPPMQQFPPMQMNGQPVWPPQNTQLPPH-------MPPQMHY 292
Query: 290 RPPQGMPPP---PPP 255
RP PPP PPP
Sbjct: 293 RPAVRPPPPNMMPPP 307
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 414
Score = 447 bits (1149), Expect = 2e-123
Identities = 246/360 (68%), Positives = 269/360 (74%), Gaps = 29/360 (8%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRI PGVGANLLGQH+AERNQ+AT YVG LD Q+SEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRITPGVGANLLGQHAAERNQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGFIEFRSE+DADYAIK+LNMIK++GKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFIEFRSEDDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDPD+GNSRGFGFISYDSF+ASD+AIEAM GQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPT---APQ-ANGI 456
NR ITVSYAYKKDTKGERHGT AER+LA++NP KSRPHTLFASGPP+ PQ G+
Sbjct: 181 NRAITVSYAYKKDTKGERHGTLAERMLASSNPNTTKSRPHTLFASGPPSLVGPPQLGQGL 240
Query: 455 P--RPFANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQ--QQHGLAVPPPMQYR 288
P P ANG M +P+ G PPP Q P W QP Q QQ G+ PP
Sbjct: 241 PPAPPQANGNM-GMPMNGHM---HPPPFAGGQGPPLQWGNQPQQMMQQQGM---PPQGMP 293
Query: 287 PPQGMPPPP---PPQFFHHQQGF--GGPRPPPPQAMGMNQHGWPPQHMQQGGPSPPQQPM 123
PPQ P PP PP GF G P PPP MG G PP G PP Q M
Sbjct: 294 PPQFRPGPPGSRPPNMPPPPHGFHVGPPGGPPPMGMG----GPPP-----WGRGPPPQGM 344
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 430 bits (1105), Expect = 2e-118
Identities = 206/231 (89%), Positives = 221/231 (95%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+AT YVG LDPQ++EELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH GYGF+EFRSEEDADYAIKVLNMIK++GKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG + +NPKIMRDPDTGNSRGFGF+SYDSF+ASDAAIEAM GQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPPTAP 471
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP A KSRPHTLFASGPPT P
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLP 231
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of
splicing factor 3b [Chlamydomonas reinhardtii]
Length = 396
Score = 415 bits (1065), Expect = 1e-113
Identities = 227/373 (60%), Positives = 254/373 (68%), Gaps = 22/373 (5%)
Frame = -3
Query: 1154 RIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTG 975
RIAPGVGANL+GQH+ +RNQEATVYVG LD Q +EEL+WELF Q+GPVVNVY+PKDRVT
Sbjct: 10 RIAPGVGANLIGQHAQDRNQEATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTN 69
Query: 974 LHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 795
H GYGF+EF+ EEDADYAIKVLNM+K++GK IRVNKASQDK+ DVGANLFIGNLDPDV
Sbjct: 70 AHQGYGFVEFKGEEDADYAIKVLNMVKVYGKAIRVNKASQDKRQADVGANLFIGNLDPDV 129
Query: 794 DEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQ 615
DEK+LYDTFSAFG + + PKIMRDPDTGNSRGFGF+SYD F+ASDAAIEAM GQYLCNR
Sbjct: 130 DEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRGFGFVSYDCFEASDAAIEAMNGQYLCNRA 189
Query: 614 ITVSYAYKKDTKGERHGTPAERLLAA--TNPVAQKSRPHTLFASGPPTAPQANGIPRPFA 441
ITVSYA+KKDTKGERHGTPAERLLAA A +SRP+ LFA GP Q G P
Sbjct: 190 ITVSYAFKKDTKGERHGTPAERLLAAQMREKAAAQSRPNMLFAEGPKLKGQQVGQAPPAP 249
Query: 440 NGGMQPVPIPGPRPTPPPPP---PQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMP 270
GP P PPP P P Y PP P+ PPP + P
Sbjct: 250 VMAPSGFAAGGPMPPPPPGPSGMPPPYGGPPP-----PYGAPQHWGGPPPGHFPPHM--- 301
Query: 269 PPPPPQF--FHHQQGFGGPRPP---PPQAMGMN-QHGWPPQHMQQGGPSPPQQPMHLHHH 108
PPPP F + G+G P PP PP GM G PP GP PP P +
Sbjct: 302 PPPPGGFGGYGPGPGYGMPPPPFGMPPPHFGMGPPPGMPPPPGYGMGP-PPGMPPPPGYG 360
Query: 107 MFMPP--PPPPPH 75
M PP PPPPP+
Sbjct: 361 MGPPPGMPPPPPN 373
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4
[Oryctolagus cuniculus]
Length = 384
Score = 386 bits (991), Expect = 4e-105
Identities = 209/356 (58%), Positives = 240/356 (67%), Gaps = 30/356 (8%)
Frame = -3
Query: 1109 AERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEED 930
+ERNQ+ATVYVGGLD ++SE LLWELF+Q+GPVVN ++PKDRVTG H GYGF+EF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 929 ADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGV 750
ADYAIK++NMIK++GKPIRVNKAS K+LDVGAN+FIGNLDP++DEK+LYDTFSAFG +
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 749 ASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGER 570
PKIMRDPDTGNS+G+ FI++ SFDASDAAIEAM GQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 569 HGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANGIPRPFANGGMQPVPIPG------ 408
HG+ AERLLAA NP++Q RPH LFA PP N + +G PVP PG
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPVPPPGALPPGI 246
Query: 407 -PRPTPPPPPPQVYQIQPPSWQFQ-PHQQQHGLAVPPPMQYRPP--QGMPPPPPPQFFHH 240
P PPP PP PPS HG + P P PP G PPP PP H
Sbjct: 247 PPAMPPPPMPPGAGGHGPPSAGTPGAGHPGHGHSHPHPF---PPGSGGQPPPRPPPGMPH 303
Query: 239 QQGFGGPRPPPPQAMGMNQHGWP-PQHMQQGGPSPPQQPMHLHHHMFMPPPPPPPH 75
P PPP MGM G P M GP PP H M PPP PPH
Sbjct: 304 ------PGPPP---MGMPPRGPPFGSPMGHPGPMPP-------HGMRGPPPLMPPH 343
>gi|73981537|ref|XP_540295.2| PREDICTED: similar to splicing factor 3b, subunit
4 (predicted) [Canis familiaris]
Length = 409
Score = 377 bits (967), Expect = 2e-102
Identities = 200/352 (56%), Positives = 237/352 (67%), Gaps = 25/352 (7%)
Frame = -3
Query: 1109 AERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEED 930
+ERNQ+ATVYVGGLD ++SE LLWELF+Q+GPVVN ++PKDRVTG H GYGF+EF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 929 ADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGV 750
ADYAIK++NMIK++GKPIRVNKAS K+LDVGAN+FIGNLDP++DEK+LYDTFSAFG +
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 749 ASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGER 570
PKIMRDPDTGNS+G+ FI++ SFDASDAAIEAM GQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 569 HGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANGIPRPFANGGMQP-VPIPGPRPTP 393
HG+ AERLLAA NP++Q RPH LFA PP N + +G P +P PG P P
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPP 246
Query: 392 PPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPPPP--PPQFFHHQQGFGGP 219
PPP + PP A+PPP G PP P H G P
Sbjct: 247 VPPPGALPPGIPP-------------AMPPPPMPPGAGGHGPPSAGTPGAGHPGHGHSHP 293
Query: 218 RPPPPQAMGM--NQHGWPPQHMQQGGPSPPQQPMHLHH----HMFMPPPPPP 81
P PP M + H PP GG PP+ P + H M +PP PP
Sbjct: 294 HPFPPSGMPHPGHPHAGPP---GSGGQPPPRPPPGMPHPGPPPMGLPPRGPP 342
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like
[Monodelphis domestica]
Length = 424
Score = 377 bits (967), Expect = 2e-102
Identities = 210/376 (55%), Positives = 242/376 (64%), Gaps = 42/376 (11%)
Frame = -3
Query: 1109 AERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEED 930
+ERNQ+ATVYVGGLD ++SE LLWELF+Q+GPVVN ++PKDRVTG H GYGF+EF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 929 ADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGV 750
ADYAIK++NMIK++GKPIRVNKAS K+LDVGAN+FIGNLDP++DEK+LYDTFSAFG +
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 749 ASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGER 570
PKIMRDPDTGNS+G+ FI++ SFDASDAAIEAM GQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 569 HGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANGIPRPFANG----GM-------QP 423
HG+ AERLLAA NP++Q RPH LFA PP N + +G GM P
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPP 246
Query: 422 VPIPG-------PRPTPPPPPPQVYQIQPPSWQFQ-PHQQQHGLAVPPPMQYRPPQGMPP 267
VP PG P PPP PP PPS HG + P P PP GMP
Sbjct: 247 VPPPGALPPGIPPAMPPPPMPPGAGAHGPPSAGTPGAGHPGHGHSHPHPF---PPGGMPH 303
Query: 266 PPPPQF---FHHQQGFGGP---------RPPPPQAMGMNQHGWPPQHMQQGGPSPPQQPM 123
P Q H G G P +PPP GM G PP M GP P PM
Sbjct: 304 PGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGP-PFGSPM 362
Query: 122 HLHHHMFMPPPPPPPH 75
P P PPH
Sbjct: 363 G-------HPGPMPPH 371
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
Length = 424
Score = 376 bits (964), Expect = 5e-102
Identities = 204/367 (55%), Positives = 240/367 (65%), Gaps = 40/367 (10%)
Frame = -3
Query: 1109 AERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEED 930
+ERNQ+ATVYVGGLD ++SE LLWELF+Q+GPVVN ++PKDRVTG H GYGF+EF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 929 ADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGV 750
ADYAIK++NMIK++GKPIRVNKAS K+LDVGAN+FIGNLDP++DEK+LYDTFSAFG +
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 749 ASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGER 570
PKIMRDPDTGNS+G+ FI++ SFDASDAAIEAM GQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 569 HGTPAERLLAATNPVAQKSRPHTLFASGPPTAPQANGIPRPFANGGMQP-VPIPGPRPTP 393
HG+ AERLLAA NP++Q RPH LFA PP N + +G P +P PG P P
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPP 246
Query: 392 PPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPPPP--PPQFFHHQQGFGGP 219
PPP + PP A+PPP G PP P H G P
Sbjct: 247 VPPPGALPPGIPP-------------AMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHP 293
Query: 218 RPPPPQAM---GMNQ--------------HGWPPQHMQQGGPSPPQQPMHLHH----HMF 102
P PP M GM+Q H PP GG PP+ P + H M
Sbjct: 294 HPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPP---GSGGQPPPRPPPGMPHPGPPPMG 350
Query: 101 MPPPPPP 81
MPP PP
Sbjct: 351 MPPRGPP 357
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,810,539,025,462
Number of Sequences: 15229318
Number of Extensions: 3810539025462
Number of Successful Extensions: 885398663
Number of sequences better than 0.0: 0
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