BLASTX 7.6.2
Query= UN32640 /QuerySize=1208
(1207 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18510.1 | Symbols: emb2444 | emb2444 (embryo ... 654 5e-188
TAIR9_protein||AT1G49760.1 | Symbols: PAB8, PABP8 | PAB8 (POLY(A... 124 1e-028
TAIR9_protein||AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | PAB2... 122 5e-028
TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A... 115 6e-026
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 110 2e-024
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 108 1e-023
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 106 4e-023
TAIR9_protein||AT4G10110.1 | Symbols: | RNA recognition motif (... 68 1e-011
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 62 9e-010
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 62 9e-010
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 61 1e-009
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 61 1e-009
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 61 1e-009
TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation fa... 59 4e-009
TAIR9_protein||AT1G13690.1 | Symbols: ATE1 | ATE1; nucleic acid ... 57 2e-008
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 55 8e-008
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 54 1e-007
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 54 1e-007
TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine... 52 5e-007
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 50 2e-006
>TAIR9_protein||AT2G18510.1 | Symbols: emb2444 | emb2444 (embryo defective
2444); RNA binding / nucleic acid binding / nucleotide binding |
chr2:8031554-8033517 REVERSE
Length = 364
Score = 654 bits (1685), Expect = 5e-188
Identities = 321/370 (86%), Positives = 336/370 (90%), Gaps = 10/370 (2%)
Frame = -3
Query: 1163 MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDR 984
MTTRIAPGVGANLLGQHSAERNQ+ATVYVGGLD QLSEELLWELFVQ+GPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 983 VTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGANLFIGNLD 804
VT LH YGFIE+RSEEDADYAIKVLNMIK+HGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 803 PDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLC 624
PDVDEK+LYDTFSAFG +ASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAIE+MTGQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 623 NRQITVSYAYKKDTKGERHGTPAERLLAATNPVAQKSRPHTLFASGPP-TAPQANGIPRP 447
NRQITVSYAYKKDTKGERHGTPAERLLAATNP AQKSRPHTLFA GPP +APQ NG+PRP
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGLPRP 240
Query: 446 FANGGMQPVPIPGPRPTPPPPPPQVYQIQPPSWQFQPHQQQHGLAVPPPMQYRPPQGMPP 267
FANG MQPVPIP PR PPPPPPQVYQ QPPSW QP QQH + VPPPMQ+RPPQGMPP
Sbjct: 241 FANGSMQPVPIPAPR-QPPPPPPQVYQTQPPSWPSQP--QQHSM-VPPPMQFRPPQGMPP 296
Query: 266 PPPPQFFHHQQGFGGPR-PPPPQAMGMNQH-GWPPQHM-QQGGPSPPQQPMHLHHHMFMP 96
PPPPQF +HQQGFGGPR PPPPQAMGM+QH GWPPQHM QQGGP QQP + HHHM M
Sbjct: 297 PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPPYQHHHMSM- 355
Query: 95 PPPPPPHQG* 66
PPPPPHQG*
Sbjct: 356 -PPPPPHQG* 364
>TAIR9_protein||AT1G49760.1 | Symbols: PAB8, PABP8 | PAB8 (POLY(A) BINDING
PROTEIN 8); RNA binding / translation initiation factor |
chr1:18416740-18419753 FORWARD
Length = 672
Score = 124 bits (310), Expect = 1e-028
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Frame = -3
Query: 1148 APGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLH 969
A G A G A + ++YVG LD +++ L+E F Q+G VV+V V +D T
Sbjct: 29 AAGAAAAAAG---AAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRS 85
Query: 968 LGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVD 792
LGYG++ + + +DA A+ LN + ++G+ IRV + +D G N+FI NLD +D
Sbjct: 86 LGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSID 145
Query: 791 EKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQI 612
K L++TFSAFG + S K+ DP +G S+G+GF+ YD+ +A+ AI+ + G L ++Q+
Sbjct: 146 HKALHETFSAFGPILS-CKVAVDP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQV 203
Query: 611 TVS---YAYKKDTKGER 570
V + ++D GE+
Sbjct: 204 YVGPFVHKLQRDPSGEK 220
>TAIR9_protein||AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | PAB2 (POLY(A)
BINDING 2); RNA binding / translation initiation factor |
chr4:16336732-16339892 FORWARD
Length = 630
Score = 122 bits (305), Expect = 5e-028
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 3/173 (1%)
Frame = -3
Query: 1121 GQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFR 942
G +A + ++YVG LD +++ L++ F Q G VV V V +D VT LGYG++ F
Sbjct: 26 GGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFT 85
Query: 941 SEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKILYDTFS 765
+ +DA AI+ LN I ++GKPIRV + +D GA N+FI NLD +D K L+DTFS
Sbjct: 86 NPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFS 145
Query: 764 AFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITV 606
+FG + S K+ D +G S+G+GF+ Y + +++ AIE + G L ++Q+ V
Sbjct: 146 SFGNIVS-CKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196
>TAIR9_protein||AT2G23350.1 | Symbols: PAB4, PABP4 | PAB4 (POLY(A) BINDING
PROTEIN 4); RNA binding / translation initiation factor |
chr2:9943209-9946041 FORWARD
Length = 663
Score = 115 bits (287), Expect = 6e-026
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Frame = -3
Query: 1193 PATGVKEEK*MTTRIAPGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGP 1014
P V + T PG+G G ++YVG LD +++ L++ F +
Sbjct: 13 PPPAVVNDGAATASATPGIGVG-GGGDGVTHGALCSLYVGDLDFNVTDSQLYDYFTEVCQ 71
Query: 1013 VVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQDKKSLDV 834
VV+V V +D T LGYG++ + + +DA+ A++ LN ++GK IR+ +S+D +
Sbjct: 72 VVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRS 131
Query: 833 G-ANLFIGNLDPDVDEKILYDTFSAFGGVASNPKIMRDPDTGNSRGFGFISYDSFDASDA 657
G NLF+ NLD VD K L++ FS G + S K+ D G SRG+GF+ +D+ D++
Sbjct: 132 GVGNLFVKNLDKSVDNKTLHEAFSGCGTIVS-CKVATD-HMGQSRGYGFVQFDTEDSAKN 189
Query: 656 AIEAMTGQYLCNRQITVSYAYKKDTK 579
AIE + G+ L ++QI V +K+ +
Sbjct: 190 AIEKLNGKVLNDKQIFVGPFLRKEER 215
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 110 bits (274), Expect = 2e-024
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 9/175 (5%)
Frame = -3
Query: 1088 TVYVGGLDPQLSEELLWELFVQSGPV-VNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIK 912
+VYVG + Q++E LL E+F +GPV + + KD+ + YGF+ + A AI
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS-----YGFVHYFDRRSAALAIL 114
Query: 911 VLNMIKIHGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKILYDTFSAFGGVASNP 738
LN + G+PI+VN A + D + N+F+G+L P+V + LY +FS F S+
Sbjct: 115 SLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSS-CSDA 173
Query: 737 KIMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGE 573
++M D TG SRGFGF+S+ + + AI M G++L +RQI ++A K T G+
Sbjct: 174 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGD 228
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 108 bits (268), Expect = 1e-023
Identities = 65/199 (32%), Positives = 114/199 (57%), Gaps = 8/199 (4%)
Frame = -3
Query: 1088 TVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKV 909
+VYVG + Q++E LL E+F +GPV + + + + YGF+ + A AI
Sbjct: 55 SVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKS----SYGFVHYFDRRSAGLAILS 110
Query: 908 LNMIKIHGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGVASNPK 735
LN + G+PI+VN AS ++ N+F+G+L P+V + +L+ FS + S+ +
Sbjct: 111 LNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVY-PTCSDAR 169
Query: 734 IMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGE-RHGTP 558
+M D TG SRGFGF+S+ + + AI+ +TG++L +RQI ++A K T GE + +
Sbjct: 170 VMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSD 229
Query: 557 AERLLAATNPVAQKSRPHT 501
++ ++ T+ V++ + T
Sbjct: 230 SKSVVELTSGVSEDGKDTT 248
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 106 bits (263), Expect = 4e-023
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 7/174 (4%)
Frame = -3
Query: 1088 TVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKV 909
+VYVG + Q++E LL E+F +GPV + + + + YGF+ + A AI
Sbjct: 55 SVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKS----SYGFVHYFDRRSAGLAILS 110
Query: 908 LNMIKIHGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKILYDTFSAFGGVASNPK 735
LN + G+PI+VN AS ++ N+F+G+L P+V + +L+ FS + S+ +
Sbjct: 111 LNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVY-PTCSDAR 169
Query: 734 IMRDPDTGNSRGFGFISYDSFDASDAAIEAMTGQYLCNRQITVSYAYKKDTKGE 573
+M D TG SRGFGF+S+ + + AI+ +TG++L +RQI ++A K T GE
Sbjct: 170 VMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGE 223
>TAIR9_protein||AT4G10110.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:6309606-6310809 REVERSE
Length = 174
Score = 68 bits (164), Expect = 1e-011
Identities = 26/81 (32%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = -3
Query: 1088 TVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKV 909
TVY+G +D ++S+ +L+++ +Q+G V+++++P+D+ T G+ F E+ +EE ADYA+K+
Sbjct: 8 TVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEIADYAVKL 67
Query: 908 LN-MIKIHGKPIRVNKASQDK 849
+ ++ ++ + ++ + QDK
Sbjct: 68 FSGLVSLYNRTLKFAISGQDK 88
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 62 bits (148), Expect = 9e-010
Identities = 36/89 (40%), Positives = 50/89 (56%)
Frame = -3
Query: 1127 LLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIE 948
L + SA + VYVG L +++E+L LF + G VV+ V + T G+GF+
Sbjct: 165 LQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVT 224
Query: 947 FRSEEDADYAIKVLNMIKIHGKPIRVNKA 861
F SEED + AI LN + G+ IRVNKA
Sbjct: 225 FSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 62 bits (148), Expect = 9e-010
Identities = 36/89 (40%), Positives = 50/89 (56%)
Frame = -3
Query: 1127 LLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIE 948
L + SA + VYVG L +++E+L LF + G VV+ V + T G+GF+
Sbjct: 165 LQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVT 224
Query: 947 FRSEEDADYAIKVLNMIKIHGKPIRVNKA 861
F SEED + AI LN + G+ IRVNKA
Sbjct: 225 FSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 61 bits (147), Expect = 1e-009
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = -3
Query: 1145 PGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHL 966
PG+G+ S E + E +Y+G L P L ++ L LF G +V V KDRVTGL
Sbjct: 463 PGLGSTPTKPPSKEYD-ETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSK 521
Query: 965 GYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQ 855
GYGF+++ + A+ A++ +N + G+ + V A +
Sbjct: 522 GYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGK 558
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 61 bits (147), Expect = 1e-009
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = -3
Query: 1145 PGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHL 966
PG+G+ S E + E +Y+G L P L ++ L LF G +V V KDRVTGL
Sbjct: 463 PGLGSTPTKPPSKEYD-ETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSK 521
Query: 965 GYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQ 855
GYGF+++ + A+ A++ +N + G+ + V A +
Sbjct: 522 GYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGK 558
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 61 bits (147), Expect = 1e-009
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = -3
Query: 1145 PGVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHL 966
PG+G+ S E + E +Y+G L P L ++ L LF G +V V KDRVTGL
Sbjct: 463 PGLGSTPTKPPSKEYD-ETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSK 521
Query: 965 GYGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKASQ 855
GYGF+++ + A+ A++ +N + G+ + V A +
Sbjct: 522 GYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGK 558
>TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation factor, putative
| chr1:26999606-27001850 FORWARD
Length = 462
Score = 59 bits (142), Expect = 4e-009
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = -3
Query: 1112 SAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEE 933
++ +Q V+VG + +EE L E+ + GPVV+ + DR TG GYGF E++ EE
Sbjct: 2 ASSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE 61
Query: 932 DADYAIKVLNMIKIHGKPIRVNKASQDK 849
A A + L +I+G+ +RV+ A DK
Sbjct: 62 TALSARRNLQSYEINGRQLRVDFAENDK 89
>TAIR9_protein||AT1G13690.1 | Symbols: ATE1 | ATE1; nucleic acid binding /
nucleotide binding | chr1:4693380-4694179 FORWARD
Length = 178
Score = 57 bits (136), Expect = 2e-008
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = -3
Query: 1097 QEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYA 918
Q+ T+YVGGL +++E +L F+ G + +V P D+ H +GF+ F EDA A
Sbjct: 11 QKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAA 70
Query: 917 IKVLNMIKIHGKPIRVNKASQDK 849
+ ++ +++G+ + VN A +K
Sbjct: 71 MDNMDGAELYGRVLTVNYALPEK 93
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 55 bits (131), Expect = 8e-008
Identities = 32/94 (34%), Positives = 46/94 (48%)
Frame = -3
Query: 1142 GVGANLLGQHSAERNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLG 963
GV + + R +Y+GGL P E L + F V V ++VTG G
Sbjct: 14 GVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRG 73
Query: 962 YGFIEFRSEEDADYAIKVLNMIKIHGKPIRVNKA 861
YGF+ F SE+ A+ AI +N +++G I VN A
Sbjct: 74 YGFVNFISEDSANSAISAMNGQELNGFNISVNVA 107
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 54 bits (129), Expect = 1e-007
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = -3
Query: 1103 RNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDAD 924
R + ++VGGL + L + F G V V DR TG G+GF+ F E+ A+
Sbjct: 31 RYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSAN 90
Query: 923 YAIKVLNMIKIHGKPIRVNKASQ 855
AIK ++ +++G+ IRVN A++
Sbjct: 91 NAIKEMDGKELNGRQIRVNLATE 113
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 54 bits (129), Expect = 1e-007
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = -3
Query: 1103 RNQEATVYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDAD 924
R + ++VGGL + L + F G V V DR TG G+GF+ F E+ A+
Sbjct: 31 RYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSAN 90
Query: 923 YAIKVLNMIKIHGKPIRVNKASQ 855
AIK ++ +++G+ IRVN A++
Sbjct: 91 NAIKEMDGKELNGRQIRVNLATE 113
>TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine-rich
RNA-binding protein 6); RNA binding / nucleic acid binding / nucleotide
binding | chr1:6415226-6416283 FORWARD
Length = 156
Score = 52 bits (124), Expect = 5e-007
Identities = 28/75 (37%), Positives = 44/75 (58%)
Frame = -3
Query: 1085 VYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKVL 906
++VGGL P ELL E F G +V+ V DR +GL G+GF+ + S E A+ A++ +
Sbjct: 38 IFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAM 97
Query: 905 NMIKIHGKPIRVNKA 861
++ G+ I V+ A
Sbjct: 98 QNKELDGRIIGVHPA 112
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 50 bits (119), Expect = 2e-006
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = -3
Query: 1085 VYVGGLDPQLSEELLWELFVQSGPVVNVYVPKDRVTGLHLGYGFIEFRSEEDADYAIKVL 906
VYVG L P ++++L E F G VV+ V +DR T G+GF+ + S +A+ A+ +
Sbjct: 5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGM 64
Query: 905 NMIKIHGKPIRV 870
+ +++G+ + V
Sbjct: 65 DGKELNGRRVSV 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,238,017,139
Number of Sequences: 33410
Number of Extensions: 17238017139
Number of Successful Extensions: 561791121
Number of sequences better than 0.0: 0
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