Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN32724


BLASTX 7.6.2

Query= UN32724 /QuerySize=1271
        (1270 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G27330.1 | Symbols:  | zinc finger (C3HC4-type...    500   1e-141

>TAIR9_protein||AT3G27330.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
        family protein | chr3:10116950-10120516 REVERSE

          Length = 914

 Score =  500 bits (1285), Expect = 1e-141
 Identities = 273/371 (73%), Positives = 300/371 (80%), Gaps = 36/371 (9%)
 Frame = -1

Query: 1195 ISAMVSEAPSKATNRSTDGS---------------SADIFISPRFKSAAALAGWDEEDLI 1061
            I  MVSE P + TNRS DGS               +A+IFISPRFKSAAA+AGWDEEDLI
Sbjct:  557 IQRMVSETPLRVTNRSGDGSNGSKEVSIAREKNGENAEIFISPRFKSAAAMAGWDEEDLI 616

Query: 1060 IASFVVEDTPERSSSKRRRRSSLLSKTSPPSSGSRRRQRIKQSSNSLPVIDLDEVIRREE 881
            IASFVV+DTPERSSSKRRRRS+LL K++PPS  SRR QR+KQS   LPVIDLD+VIR EE
Sbjct:  617 IASFVVDDTPERSSSKRRRRSNLLFKSTPPSGSSRRNQRVKQSLVPLPVIDLDKVIRHEE 676

Query:  880 EKSAEKKNRKNKETKTETKEEKRAEKDEKMLSEQKNSTSVVLPCIDKLRDELSCAICLEI 701
            EKSAEKK +K +E +TETKEEK+ +KDEK LS+      VVLPCIDKLRDELSCAICLEI
Sbjct:  677 EKSAEKK-KKKREMETETKEEKKIDKDEKSLSDH-----VVLPCIDKLRDELSCAICLEI 730

Query:  700 CYEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNGKYCTVNTVLWNTIQLLFPKEV 521
            C+EPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNG+YCTVNTVLWNTIQLLFPKEV
Sbjct:  731 CFEPSTTTCGHSFCKKCLRSAADKCGRKCPKCRQLIGNGRYCTVNTVLWNTIQLLFPKEV 790

Query:  520 EAQRAAASANFLSKETPSLRDPNQRLRSRNRETA-YQARLQREDLSRLLVSEERSERRRR 344
            EAQR AASAN   KETPS R+PNQRLRSRNRETA +Q RLQRED+SRLLVSEERSER  R
Sbjct:  791 EAQR-AASANLKGKETPSPRNPNQRLRSRNRETALFQERLQREDISRLLVSEERSERSER 849

Query:  343 -----GVRLDQDGDAAFALRLQRQEFASAFGVTAAAATSSSSSSSSSSSDVSLSRARANL 179
                  +RLDQ+ DAA A+RLQRQEFASAFG T A  +SSS S        +LSRARANL
Sbjct:  850 RRRSTSMRLDQNRDAALAMRLQRQEFASAFGATTAETSSSSVS--------TLSRARANL 901

Query:  178 RAMASRAARRQ 146
            +AMASRA RRQ
Sbjct:  902 QAMASRAVRRQ 912


 Score =  479 bits (1232), Expect = 2e-135
 Identities = 256/335 (76%), Positives = 283/335 (84%), Gaps = 21/335 (6%)
 Frame = -1

Query: 1153 RSTDGSSADIFISPRFKSAAALAGWDEEDLIIASFVVEDTPERSSSKRRRRSSLLSKTSP 974
            R  +G +A+IFISPRFKSAAA+AGWDEEDLIIASFVV+DTPERSSSKRRRRS+LL K++P
Sbjct:  586 REKNGENAEIFISPRFKSAAAMAGWDEEDLIIASFVVDDTPERSSSKRRRRSNLLFKSTP 645

Query:  973 PSSGSRRRQRIKQSSNSLPVIDLDEVIRREEEKSAEKKNRKNKETKTETKEEKRAEKDEK 794
            PS  SRR QR+KQS   LPVIDLD+VIR EEEKSAEKK +K +E +TETKEEK+ +KDEK
Sbjct:  646 PSGSSRRNQRVKQSLVPLPVIDLDKVIRHEEEKSAEKK-KKKREMETETKEEKKIDKDEK 704

Query:  793 MLSEQKNSTSVVLPCIDKLRDELSCAICLEICYEPSTTTCGHSFCKKCLRSAADKCGRKC 614
             LS+      VVLPCIDKLRDELSCAICLEIC+EPSTTTCGHSFCKKCLRSAADKCGRKC
Sbjct:  705 SLSDH-----VVLPCIDKLRDELSCAICLEICFEPSTTTCGHSFCKKCLRSAADKCGRKC 759

Query:  613 PKCRQLIGNGKYCTVNTVLWNTIQLLFPKEVEAQRAAASANFLSKETPSLRDPNQRLRSR 434
            PKCRQLIGNG+YCTVNTVLWNTIQLLFPKEVEAQR AASAN   KETPS R+PNQRLRSR
Sbjct:  760 PKCRQLIGNGRYCTVNTVLWNTIQLLFPKEVEAQR-AASANLKGKETPSPRNPNQRLRSR 818

Query:  433 NRETA-YQARLQREDLSRLLVSEERSERRRR-----GVRLDQDGDAAFALRLQRQEFASA 272
            NRETA +Q RLQRED+SRLLVSEERSER  R      +RLDQ+ DAA A+RLQRQEFASA
Sbjct:  819 NRETALFQERLQREDISRLLVSEERSERSERRRRSTSMRLDQNRDAALAMRLQRQEFASA 878

Query:  271 FGVTAAAATSSSSSSSSSSSDVSLSRARANLRAMA 167
            FG T A  +SSS S        +LSRARANL+AMA
Sbjct:  879 FGATTAETSSSSVS--------TLSRARANLQAMA 905

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,279,148,763
Number of Sequences: 33410
Number of Extensions: 17279148763
Number of Successful Extensions: 561805222
Number of sequences better than 0.0: 0