BLASTX 7.6.2
Query= UN32902 /QuerySize=1252
(1251 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03360.1 | Symbols: ATRRP4 | ATRRP4 (ARABIDOPS... 569 2e-162
>TAIR9_protein||AT1G03360.1 | Symbols: ATRRP4 | ATRRP4 (ARABIDOPSIS THALIANA
RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease |
chr1:824653-826179 FORWARD
Length = 323
Score = 569 bits (1465), Expect = 2e-162
Identities = 284/320 (88%), Positives = 306/320 (95%), Gaps = 1/320 (0%)
Frame = -3
Query: 1180 MMRKIQLPFTQTQKVRYERAIERLQSLSSTANSDASVIVTDTIPVNHEDAFLKGHGTSEV 1001
+MRK+QLP +QTQKVR+ERAIERLQSLSS+ANSDASVIVTD+IPVNH+DAFLKGHGTSEV
Sbjct: 2 VMRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEV 61
Query: 1000 EGELLATVCGVVERVDKLVYVRTLRARYKP*VGDIVVGRIIEVAQKRWTVELNFTQDGVL 821
+GELLATVCGVVERVDKLVYVRTLRARYKP VGDIVVGR+IEVAQKRW VELNF QDGVL
Sbjct: 62 DGELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVL 121
Query: 820 MLSSMNMPDGSQRRRTSVDELNMRNIFVEHDVVCAEVRSIQHDGSLQLHARSQKYGKLEK 641
MLSSMNMPDG QRRRTSVDELNMRNIFVEHDVVCAEVR+ QHDGSLQL ARSQKYGKLEK
Sbjct: 122 MLSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEK 181
Query: 640 GQLLKVDPYLVKRSKHHFHYIESLGIDLIIGCNGFIWVGEHVEIRDPVMIDDQKDDEMMI 461
GQLLKVDPYLVKRSKHHFHY+ESLGIDLIIGCNGFIWVGEHVE+RDP+ IDDQKD+EM+
Sbjct: 182 GQLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDEEMIS 241
Query: 460 SSSS-KEQSHTPLETRQNICRIGNAIRVLSNLGFTVTVEVITETVNLSSSKNVDIYDMIG 284
SSS+ KEQSH PLETRQ ICRIGNAIRVLSNLGFTVT+EVI ETVNLS+SKN+DI+DM+G
Sbjct: 242 SSSTGKEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIHDMLG 301
Query: 283 SEFHVLVAENEAERRRQKRK 224
SEFHV+VAENEAERRR KRK
Sbjct: 302 SEFHVVVAENEAERRRTKRK 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,363,194,879
Number of Sequences: 33410
Number of Extensions: 17363194879
Number of Successful Extensions: 561832239
Number of sequences better than 0.0: 0
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