BLASTX 7.6.2
Query= UN33328 /QuerySize=1171
(1170 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61800.1 | Symbols: | pentatricopeptide (PPR)... 212 4e-055
TAIR9_protein||AT4G38010.1 | Symbols: | pentatricopeptide (PPR)... 113 2e-025
TAIR9_protein||AT2G39620.1 | Symbols: | pentatricopeptide (PPR)... 110 3e-024
TAIR9_protein||AT3G02010.1 | Symbols: | pentatricopeptide (PPR)... 107 1e-023
TAIR9_protein||AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPI... 105 6e-023
TAIR9_protein||AT4G18840.1 | Symbols: | pentatricopeptide (PPR)... 105 6e-023
TAIR9_protein||AT3G53360.1 | Symbols: | pentatricopeptide (PPR)... 105 8e-023
TAIR9_protein||AT4G33170.1 | Symbols: | pentatricopeptide (PPR)... 105 8e-023
TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)... 104 1e-022
TAIR9_protein||AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO ... 101 1e-021
TAIR9_protein||AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY O... 100 3e-021
TAIR9_protein||AT3G26782.1 | Symbols: | LOCATED IN: mitochondri... 99 4e-021
TAIR9_protein||AT1G03540.1 | Symbols: | pentatricopeptide (PPR)... 99 6e-021
TAIR9_protein||AT2G29760.1 | Symbols: | pentatricopeptide (PPR)... 98 8e-021
TAIR9_protein||AT3G04750.1 | Symbols: | pentatricopeptide (PPR)... 97 1e-020
TAIR9_protein||AT3G58590.1 | Symbols: | pentatricopeptide (PPR)... 97 1e-020
TAIR9_protein||AT4G31070.1 | Symbols: | pentatricopeptide (PPR)... 97 2e-020
TAIR9_protein||AT3G56550.1 | Symbols: | pentatricopeptide (PPR)... 96 4e-020
TAIR9_protein||AT3G57430.1 | Symbols: | pentatricopeptide (PPR)... 94 1e-019
>TAIR9_protein||AT5G61800.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:24830054-24831553 REVERSE
Length = 500
Score = 212 bits (539), Expect = 4e-055
Identities = 100/131 (76%), Positives = 117/131 (89%)
Frame = -3
Query: 508 RSFSTKWGSKYDVDREMKHYGCMADLLGRAGLIEEAAEMIEKMPRDGGKREKLLAWSGLL 329
R+ + S YDV+REMKHYGCMADLLGRAGLIEEAAEMIE+MP+DGG REKLLAWSGLL
Sbjct: 370 RNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLL 429
Query: 328 GVCRIHGNIEVAEKAAERVRELSPEDGGVYKVMAEMYANAERWEDVVKVRQVMERDERVN 149
G CRIHGNIE+AEKAA RV+ LSPEDGGVYKVM EMYANAERWE+VVKVR++++RD++V
Sbjct: 430 GGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVK 489
Query: 148 KSAGFSRVMS* 116
K+ GFS+V+S*
Sbjct: 490 KNVGFSKVLS* 500
Score = 178 bits (451), Expect = 6e-045
Identities = 85/108 (78%), Positives = 94/108 (87%)
Frame = -2
Query: 812 EALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMH 633
+A+H R L DSFLATGLVDFYAKCGFI+TAMEIF LCSDK LFTWNAMITGLAMH
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 632 GYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
G GE+TVDYFR+MV SG+KPDGV+FISVLVGC H+GLVDEA+ LFDQM
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
>TAIR9_protein||AT4G38010.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:17859582-17861261 REVERSE
Length = 560
Score = 113 bits (282), Expect = 2e-025
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 10/148 (6%)
Frame = -2
Query: 923 FFVQMRRRSVPPDFHTFPFVFKAACAKKKKNVSFALVEA---LHCQALRFGLLSDSFLAT 753
F + + PD H V +ACA S V+ +H L G+ D+ + T
Sbjct: 293 FSLMQTSSGIKPDGHILTSVL-SACA------SLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 752 GLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKP 573
+VD YAKCG+IETA+EIF+ K +FTWNA++ GLA+HG+G ++ YF MV G KP
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Query: 572 DGVSFISVLVGCCHAGLVDEAKKLFDQM 489
+ V+F++ L CCH GLVDE ++ F +M
Sbjct: 406 NLVTFLAALNACCHTGLVDEGRRYFHKM 433
>TAIR9_protein||AT2G39620.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:16518968-16521478 REVERSE
Length = 837
Score = 110 bits (273), Expect = 3e-024
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Frame = -2
Query: 992 STFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACAKKKKNVSFALV 813
ST +N ++ Y LH + F QM+ P+ TF + +AA V
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM--- 624
Query: 812 EALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMH 633
++H ++ G S + + LVD YAKCG IE++ + F S+K + +WN M++ A H
Sbjct: 625 -SVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 632 GYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQMG 486
G V F M + +KPD VSF+SVL C HAGLV+E K++F++MG
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
>TAIR9_protein||AT3G02010.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:337965-340442 FORWARD
Length = 826
Score = 107 bits (267), Expect = 1e-023
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Frame = -2
Query: 1025 ANLVFSLFTNPSTFCFNTIVRVYT---LHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKA 855
A L+F +T + ++ Y LH L + F +MR ++ D TF V KA
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGL---KLFTKMRGSNLRADQSTFATVLKA 461
Query: 854 ACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKA 675
+ + S L + LH +R G L + F +GLVD YAKCG I+ A+++F D+
Sbjct: 462 SAS----FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 674 LFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFD 495
+WNA+I+ A +G GE + F +M+ SG++PD VS + VL C H G V++ + F
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 494 QM 489
M
Sbjct: 578 AM 579
>TAIR9_protein||AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSE
Length = 810
Score = 105 bits (261), Expect = 6e-023
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = -2
Query: 1016 VFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACAKKK 837
+F + + +N ++ + + + +F QMR R+V PD T+ V A
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 836 KNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNA 657
+ + + +H +R L + F+ T LVD YAKCG I A IF + S++ + TWNA
Sbjct: 454 THHA----KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 656 MITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
MI G HG+G+ ++ F M +KP+GV+F+SV+ C H+GLV+ K F M
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
>TAIR9_protein||AT4G18840.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10338719-10340356 REVERSE
Length = 546
Score = 105 bits (261), Expect = 6e-023
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 4/134 (2%)
Frame = -2
Query: 890 PDFHTFPFVFKAACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIET 711
PD T V +ACA S + E +H + G+ + FLAT LVD Y+KCG I+
Sbjct: 302 PDGFTLVSVL-SACASLG---SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 710 AMEIFSLCSDKALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCH 531
A+E+F S + + TWN++I+ L++HG G+ ++ F MV G KP+G++FI VL C H
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 530 AGLVDEAKKLFDQM 489
G++D+A+KLF+ M
Sbjct: 418 VGMLDQARKLFEMM 431
>TAIR9_protein||AT3G53360.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:19784502-19786808 FORWARD
Length = 769
Score = 105 bits (260), Expect = 8e-023
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Frame = -2
Query: 1022 NLVFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACAK 843
NL N + +NTI+ H + R F M PD T + + C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR-GCVE 485
Query: 842 KKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTW 663
S L +HC +L+ GL + F+ GL+D YAKCG + A IF ++ + +W
Sbjct: 486 IS---SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 662 NAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQMGV 483
+ +I G A G+GE + F+ M +G++P+ V+F+ VL C H GLV+E KL+ M
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 482 E 480
E
Sbjct: 603 E 603
>TAIR9_protein||AT4G33170.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:15995701-15998673 REVERSE
Length = 991
Score = 105 bits (260), Expect = 8e-023
Identities = 61/174 (35%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Frame = -2
Query: 1025 ANLVFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACA 846
A F P + T++ + F QMR V PD T + KA+
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 845 KKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFT 666
+ +H AL+ +D F+ T LVD YAKCG I+ A +F +
Sbjct: 631 L----TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA 686
Query: 665 WNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKK 504
WNAM+ GLA HG G+ T+ F++M G+KPD V+FI VL C H+GLV EA K
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
>TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:860695-863343 REVERSE
Length = 883
Score = 104 bits (259), Expect = 1e-022
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Frame = -2
Query: 1016 VFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACAKKK 837
+FS T +NT++ + + QMR+ V PD TF +
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 836 KNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNA 657
K L + +HC LRFG S+ + L++ Y+KCG +E + +F S + + TW
Sbjct: 525 KR----LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 580
Query: 656 MITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
MI M+G GE ++ F M SG+ PD V FI+++ C H+GLVDE F++M
Sbjct: 581 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
>TAIR9_protein||AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)
| chr1:1867129-1868862 REVERSE
Length = 578
Score = 101 bits (250), Expect = 1e-021
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Frame = -2
Query: 1025 ANLVFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACA 846
A +F+ + T+++ Y+ + F +M + PD T V +ACA
Sbjct: 240 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI-SACA 298
Query: 845 KKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFT 666
+ + +H L+ G + D ++ + LVD Y+KCG +E A+ +F K LF
Sbjct: 299 HLG---VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC 355
Query: 665 WNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
WN++I GLA HG+ + + F +M VKP+ V+F+SV C HAGLVDE ++++ M
Sbjct: 356 WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 414
>TAIR9_protein||AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 872
Score = 100 bits (247), Expect = 3e-021
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = -2
Query: 1025 ANLVFSLFTNPSTFCFNTIVRVYTLHA---PSLSPHRFFVQMRRRSVPPDFHTFPFVFKA 855
A LVFS +NTI+ Y+ + +LS ++ +R S PD T V
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS--PDERTVACVL-P 507
Query: 854 ACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKA 675
ACA +F +H +R G SD +A LVD YAKCG + A +F + K
Sbjct: 508 ACASLS---AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 674 LFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFD 495
L +W MI G MHG+G+ + F +M +G++ D +SF+S+L C H+GLVDE + F+
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 494 QM 489
M
Sbjct: 625 IM 626
>TAIR9_protein||AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED
IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT3G23330.1); Has 13812 Blast hits to
4961 proteins in 140 species: Archae - 0; Bacteria - 2; Metazoa - 58;
Fungi - 30; Plants - 13522; Viruses - 0; Other Eukaryotes - 200
(source: NCBI BLink). | chr3:9850594-9852682 FORWARD
Length = 660
Score = 99 bits (246), Expect = 4e-021
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Frame = -2
Query: 1034 VRYANLVFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTF-PFVFK 858
V A +F + +N+I+ VY S F RR V TF
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF----RRLVKNKVVTFNAITLS 291
Query: 857 AACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDK 678
+ + + + +H Q +R GL D + T ++D Y KCG +ETA + F +K
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351
Query: 677 ALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLF 498
+ +W AMI G MHG+ ++ F M+ SGV+P+ ++F+SVL C HAGL E + F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 497 DQM 489
+ M
Sbjct: 412 NAM 414
>TAIR9_protein||AT1G03540.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:883782-885611 FORWARD
Length = 610
Score = 99 bits (244), Expect = 6e-021
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = -2
Query: 929 HRFFVQMRRRSVPPDFHTFPFVFKAACAKKKKNVSFALVEALHCQALRFGLLSDSFLATG 750
H +++ R D + F V KA + L + +H Q +R G + + +
Sbjct: 347 HEKAIEIFREMEEKDLYCFGTVLKACAGL----AAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 749 LVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPD 570
L+D Y K G I++A ++S S + + TWNAM++ LA +G GE V +F MV G+KPD
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 569 GVSFISVLVGCCHAGLVDEAKKLF 498
+SFI++L C H G+VDE + F
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYF 486
>TAIR9_protein||AT2G29760.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:12712884-12715100 FORWARD
Length = 739
Score = 98 bits (243), Expect = 8e-021
Identities = 45/106 (42%), Positives = 66/106 (62%)
Frame = -2
Query: 806 LHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGY 627
+H + G+ + + + L+ Y+KCG +E + E+F+ + +F W+AMI GLAMHG
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 626 GEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
G VD F +M + VKP+GV+F +V C H GLVDEA+ LF QM
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
>TAIR9_protein||AT3G04750.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:1301391-1303376 REVERSE
Length = 662
Score = 97 bits (241), Expect = 1e-020
Identities = 44/106 (41%), Positives = 65/106 (61%)
Frame = -2
Query: 806 LHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGY 627
+H +R L D+FL++ L+D Y KCG IE A +F ++K + W +MITGLA HG
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 626 GEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM 489
G+ + F RM GV P+ V+ ++VL C H+GLV+E +F+ M
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
>TAIR9_protein||AT3G58590.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21666262-21668487 FORWARD
Length = 742
Score = 97 bits (241), Expect = 1e-020
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Frame = -2
Query: 1016 VFSLFTNPSTFCFNTIVRVYTLHAPSLSPHRFFVQMRRRSVPPDFHTFPFVFKAACAKKK 837
+ S P T +N + + F M + ++ PD +TF + + C+K
Sbjct: 501 LISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL-SLCSKL- 558
Query: 836 KNVSFALVEALHCQALRFGL-LSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWN 660
L ++H + +D+F+ L+D Y KCG I + M++F +K L TW
Sbjct: 559 --CDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 659 AMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLFDQM--- 489
A+I+ L +HGYG+ ++ F+ + G KPD VSFIS+L C H G+V E LF +M
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDY 676
Query: 488 GVE 480
GVE
Sbjct: 677 GVE 679
>TAIR9_protein||AT4G31070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:15118696-15120537 REVERSE
Length = 614
Score = 97 bits (240), Expect = 2e-020
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Frame = -2
Query: 914 QMRRRSVPPDFHTFPFVFKAACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFY 735
QMR+ + + T +AC +SFA +H Q L+ G +S L L+D Y
Sbjct: 343 QMRKEGIEANSVTL-LAIVSACTNSTL-LSFA--STVHSQILKCGFMSHILLGNALIDMY 398
Query: 734 AKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFI 555
AKCG + A E+F ++K L +W++MI +HG+G ++ F+ M+ G + D ++F+
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 554 SVLVGCCHAGLVDEAKKLFDQMG 486
++L C HAGLV+EA+ +F Q G
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAG 481
>TAIR9_protein||AT3G56550.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:20952896-20954641 REVERSE
Length = 582
Score = 96 bits (237), Expect = 4e-020
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Frame = -2
Query: 1070 TSTHALSSTSVIVRYANLVFSLFTNPSTFCFNTIVRVYT---LHAPSLSPHRFFVQMRRR 900
TS S + V A+ VF +N ++ ++ LH +LS ++ +M
Sbjct: 146 TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYK---RMGNE 202
Query: 899 SVPPDFHTFPFVFKAACAKKKKNVSFALVEALHCQALRFGLLSDSFLATGLVDFYAKCGF 720
V D +T + + N+ LH A S F++ L+D YAKCG
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMGV----MLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 719 IETAMEIFSLCSDKALFTWNAMITGLAMHGYGEVTVDYFRRMVGSGVKPDGVSFISVLVG 540
+E A+ +F+ + + TWN+MI G +HG+G + +FR+MV SGV+P+ ++F+ +L+G
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 539 CCHAGLVDEAKKLFDQM 489
C H GLV E + F+ M
Sbjct: 319 CSHQGLVKEGVEHFEIM 335
>TAIR9_protein||AT3G57430.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21255731-21258403 REVERSE
Length = 891
Score = 94 bits (233), Expect = 1e-019
Identities = 41/103 (39%), Positives = 63/103 (61%)
Frame = -2
Query: 806 LHCQALRFGLLSDSFLATGLVDFYAKCGFIETAMEIFSLCSDKALFTWNAMITGLAMHGY 627
+H A++ L +D + + LVD YAKCG ++ + ++F K + TWN +I MHG
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 626 GEVTVDYFRRMVGSGVKPDGVSFISVLVGCCHAGLVDEAKKLF 498
G+ +D R M+ GVKP+ V+FISV C H+G+VDE ++F
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,531,581,943
Number of Sequences: 33410
Number of Extensions: 17531581943
Number of Successful Extensions: 567469405
Number of sequences better than 0.0: 0
|
