BLASTX 7.6.2
Query= UN33422 /QuerySize=533
(532 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43370.1 | Symbols: | U1 small nuclear ribonu... 113 7e-026
TAIR9_protein||AT2G18540.1 | Symbols: | cupin family protein | ... 54 5e-008
TAIR9_protein||AT3G48120.1 | Symbols: | unknown protein | chr3:... 49 2e-006
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 48 4e-006
TAIR9_protein||AT1G44910.1 | Symbols: | protein binding | chr1:... 48 4e-006
TAIR9_protein||AT1G44910.2 | Symbols: | protein binding | chr1:... 48 4e-006
>TAIR9_protein||AT2G43370.1 | Symbols: | U1 small nuclear ribonucleoprotein 70
kDa, putative | chr2:18013431-18015376 FORWARD
Length = 334
Score = 113 bits (282), Expect = 7e-026
Identities = 70/123 (56%), Positives = 79/123 (64%), Gaps = 17/123 (13%)
Frame = +1
Query: 31 SVSHTEEANHREE---EFEEQRSPDKRERSYH----------SHRRRSKDRE*RYRVESR 171
SVS EE +RE+ E EE+ RSYH SHRRRSKDRE R ESR
Sbjct: 215 SVSDREEEYYREKSSVEREEEFKERSSLRSYHSHRSSAHTHSSHRRRSKDREECSREESR 274
Query: 172 SDREERKDRSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIH 351
SD RK+R+RG EDRYGD+ E+SGSKRS R EE+RS KRHKH SHHHRRS + D H
Sbjct: 275 SD---RKERARGMEDRYGDNKGEVSGSKRSKR-SEEDRSRKRHKHLPSHHHRRSYSQDHH 330
Query: 352 SSD 360
SSD
Sbjct: 331 SSD 333
Score = 108 bits (269), Expect = 2e-024
Identities = 65/117 (55%), Positives = 76/117 (64%), Gaps = 10/117 (8%)
Frame = +1
Query: 22 RKRSVSHTEEANHREEEFEEQ---RSPDKRERSYH---SHRRRSKDRE*RYRVESRSDRE 183
R+ + + REEEF+E+ RS S H SHRRRSKDRE R ESRSD
Sbjct: 219 REEEYYREKSSVEREEEFKERSSLRSYHSHRSSAHTHSSHRRRSKDREECSREESRSD-- 276
Query: 184 ERKDRSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIHS 354
RK+R+RG EDRYGD+ E+SGSKRS R EE+RS KRHKH SHHHRRS + D HS
Sbjct: 277 -RKERARGMEDRYGDNKGEVSGSKRSKR-SEEDRSRKRHKHLPSHHHRRSYSQDHHS 331
>TAIR9_protein||AT2G18540.1 | Symbols: | cupin family protein |
chr2:8042382-8045008 REVERSE
Length = 708
Score = 54 bits (128), Expect = 5e-008
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Frame = +1
Query: 16 RRRKRSVSHTEEANHREEEFEEQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREERKD 195
+R + EEA REEE E++ ++ E R+ ++ E + R E R REE +
Sbjct: 455 KREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAE 514
Query: 196 RSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIHSSDTEFY* 375
++R RE+ + EE KR + +ER K RR R+ + + E
Sbjct: 515 QARKREEE--REKEEEMAKKREEERQRKEREEVERK-RREEQERKRREEEARKREEE--- 568
Query: 376 GSAREREMSPR 408
RE EM+ R
Sbjct: 569 -RKREEEMAKR 578
Score = 48 bits (113), Expect = 3e-006
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +1
Query: 16 RRRKRSVSHTEEANHREEEFEEQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREERKD 195
RRRK EEA REE + KR + R++ ++ E R R E R REE +
Sbjct: 445 RRRKEE----EEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERK-REEEEA 499
Query: 196 RSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKHRR 312
+ R E + ++ E + + R +EEE + KR + R+
Sbjct: 500 KRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQ 538
Score = 47 bits (109), Expect = 8e-006
Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Frame = +1
Query: 10 RLRRRKRSVSHTEEANHREEEFEEQRSPD--KRERSYHSHRRRSKDRE*RYRV----ESR 171
R +R + EE REEE ++R + KRE R+R ++RE + E
Sbjct: 477 RKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEE 536
Query: 172 SDREERKDRSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIH 351
R+ER++ R R + E KR + EE KR + R R I
Sbjct: 537 RQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIR 596
Query: 352 SSDTEFY*GSAREREMSPR 408
RE EM+ R
Sbjct: 597 EEQER-----KREEEMAKR 610
>TAIR9_protein||AT3G48120.1 | Symbols: | unknown protein |
chr3:17772137-17774550 FORWARD
Length = 329
Score = 49 bits (115), Expect = 2e-006
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Frame = +1
Query: 10 RLRRRKRSVSHTEEANHREEEFEEQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREER 189
+L+++ E + E RS ++ ER SHRRRS+ E R S DRE R
Sbjct: 76 KLKKKPEDPRVPERSYRESSERRRYRSRERDERD-KSHRRRSRSSE---RRSSYVDRERR 131
Query: 190 KDRSRG--REDRYGD-DNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWD 345
+ RSR R +RYGD ++ S RS E RS + K ++ + R +D
Sbjct: 132 RSRSRSAERRNRYGDRESRRRSNRSRSLSPRRERRSREDVKEKKPDYSRLIKGYD 186
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 48 bits (112), Expect = 4e-006
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Frame = +1
Query: 19 RRKRSVSHTEEANHREEEFE---EQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREER 189
R KR V+ +E HRE E + +++ +RE R R KDRE R R +REER
Sbjct: 111 RDKRRVNE-KERGHREHERDRGKDRKRDREREERKDKEREREKDRERRER-----EREER 164
Query: 190 -KDRSRGREDRYGDDNEEISGSKRSNRGEEEERSHKRHKH----------RRSHHHRRSS 336
K+R + RE R +D E + RG R +R + +R RR
Sbjct: 165 EKERVKERERREREDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKE 224
Query: 337 NWDIHSSDTEFY*GSAREREMSPRVSS 417
+ + E G + E SP+ S
Sbjct: 225 GGERKEKEREKSVGRSSRHEDSPKRKS 251
>TAIR9_protein||AT1G44910.1 | Symbols: | protein binding |
chr1:16975930-16982818 FORWARD
Length = 959
Score = 48 bits (112), Expect = 4e-006
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = +1
Query: 46 EEANHREEEFEEQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREERKDRSRGREDRYG 225
E+A +E + +E++ ++ER +R+ KD+E R +RE K++ + R R
Sbjct: 804 EKAKEKERKRDEEKVRKEKERD-EKEKRKDKDKERR-----EKEREREKEKGKERSKREE 857
Query: 226 DDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIHS 354
D E ++ E+ + + KHRR HH+ +S+ D+ S
Sbjct: 858 SDGETAMDVSEGHKDEKRKGKDRDRKHRRRHHN--NSDEDVSS 898
>TAIR9_protein||AT1G44910.2 | Symbols: | protein binding |
chr1:16975930-16982647 FORWARD
Length = 927
Score = 48 bits (112), Expect = 4e-006
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = +1
Query: 46 EEANHREEEFEEQRSPDKRERSYHSHRRRSKDRE*RYRVESRSDREERKDRSRGREDRYG 225
E+A +E + +E++ ++ER +R+ KD+E R +RE K++ + R R
Sbjct: 804 EKAKEKERKRDEEKVRKEKERD-EKEKRKDKDKERR-----EKEREREKEKGKERSKREE 857
Query: 226 DDNEEISGSKRSNRGEEEERSHKRHKHRRSHHHRRSSNWDIHS 354
D E ++ E+ + + KHRR HH+ +S+ D+ S
Sbjct: 858 SDGETAMDVSEGHKDEKRKGKDRDRKHRRRHHN--NSDEDVSS 898
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,573,006,241
Number of Sequences: 33410
Number of Extensions: 17573006241
Number of Successful Extensions: 567479730
Number of sequences better than 0.0: 0
|
