BLASTX 7.6.2
Query= UN33449 /QuerySize=1350
(1349 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|9294140|dbj|BAB02042.1| unnamed protein product [Arabidopsis ... 290 6e-076
gi|15229067|ref|NP_188380.1| F-box and associated interaction do... 289 1e-075
gi|297821759|ref|XP_002878762.1| predicted protein [Arabidopsis ... 280 4e-073
gi|297830366|ref|XP_002883065.1| F-box family protein [Arabidops... 256 7e-066
gi|15229068|ref|NP_188381.1| putative F-box/kelch-repeat protein... 246 1e-062
gi|4337208|gb|AAD18122.1| hypothetical protein [Arabidopsis thal... 210 6e-052
gi|334184414|ref|NP_180027.2| F-box associated ubiquitination ef... 191 4e-046
gi|15229053|ref|NP_188376.1| putative F-box protein [Arabidopsis... 181 2e-043
gi|297831308|ref|XP_002883536.1| hypothetical protein ARALYDRAFT... 164 5e-038
gi|42569139|ref|NP_179468.2| F-box protein [Arabidopsis thaliana] 162 1e-037
gi|4185144|gb|AAD08947.1| expressed protein [Arabidopsis thaliana] 162 1e-037
gi|18401231|ref|NP_566558.1| F-box/kelch-repeat protein [Arabido... 142 2e-031
gi|297830364|ref|XP_002883064.1| hypothetical protein ARALYDRAFT... 96 1e-017
gi|297834632|ref|XP_002885198.1| hypothetical protein ARALYDRAFT... 86 1e-014
gi|4586069|gb|AAD25686.1| hypothetical protein [Arabidopsis thal... 77 6e-012
gi|75273458|sp|Q9LJ39.1|FB185_ARATH RecName: Full=Putative F-box... 74 4e-011
gi|15230161|ref|NP_189113.1| F-box and associated interaction do... 74 4e-011
>gi|9294140|dbj|BAB02042.1| unnamed protein product [Arabidopsis thaliana]
Length = 392
Score = 290 bits (740), Expect = 6e-076
Identities = 182/391 (46%), Positives = 237/391 (60%), Gaps = 26/391 (6%)
Frame = +1
Query: 4 RMTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQ 183
+M +S LP+DLESEIL RVPAKSL++ KTTCKRWYALFRD FV KN +A ++
Sbjct: 4 KMMISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKN--FDKAGGREMIV 61
Query: 184 TYDGDVYSVAGDLH--NTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDR 357
+ VYS + +L N + ++V+GKL L S ++ S IFHC+GL+LC+ +
Sbjct: 62 LMNSRVYSNSVNLQGINNRFDPSMEVTGKLIKLNDSKGVDISAIFHCDGLILCTTTESTG 121
Query: 358 LVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQ--EEWV 531
LVVWNPCTG+ R IK R ++ N YALGY +S SS H YKILR Y DQ
Sbjct: 122 LVVWNPCTGEIRCIKPRIFYRCNDRYALGYG--NSKSSCHSYKILRSCCYYVDQNLSLMA 179
Query: 532 PQCEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEIFV 711
+ EIY+ +DSWR L I++ G+SLKGNTYWV+G E G+F+ FDF+ E+F
Sbjct: 180 AEFEIYDFSTDSWRDLGDITRDMIVYSSGVSLKGNTYWVSGSKEKGFFMRYFDFSKEVFG 239
Query: 712 RLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICVSNKISEDAN 891
RLPL P Q+ LS V +EK++VLQ + S+ MRI V+NKI D
Sbjct: 240 RLPL--PYQSFNANHTAALSAVGNEKIAVLQ------QKILAMSDEMRIWVTNKI--DEA 289
Query: 892 KDLSWRSDLFLEVDFDNYN----TYFRSFLLDEENKVALLCCSIEMVTDDSTTIIYIIGE 1059
KDLSW S+ L VD+ +N SFLLDEENKVA+ CS D + IYI+G+
Sbjct: 290 KDLSW-SNFLLTVDYGKFNLPCLVNVTSFLLDEENKVAV--CSDVDTKDGLRSRIYIVGK 346
Query: 1060 DMLKEVYRCTIEESRSNSPLVITYVPSLVHI 1152
D KEV++ T S +N PL++ YVPSLV I
Sbjct: 347 DFYKEVFKDT-RGSDNNWPLLLCYVPSLVSI 376
>gi|15229067|ref|NP_188380.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 388
Score = 289 bits (738), Expect = 1e-075
Identities = 182/390 (46%), Positives = 236/390 (60%), Gaps = 26/390 (6%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQT 186
M +S LP+DLESEIL RVPAKSL++ KTTCKRWYALFRD FV KN +A ++
Sbjct: 1 MMISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKN--FDKAGGREMIVL 58
Query: 187 YDGDVYSVAGDLH--NTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDRL 360
+ VYS + +L N + ++V+GKL L S ++ S IFHC+GL+LC+ + L
Sbjct: 59 MNSRVYSNSVNLQGINNRFDPSMEVTGKLIKLNDSKGVDISAIFHCDGLILCTTTESTGL 118
Query: 361 VVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQ--EEWVP 534
VVWNPCTG+ R IK R ++ N YALGY +S SS H YKILR Y DQ
Sbjct: 119 VVWNPCTGEIRCIKPRIFYRCNDRYALGYG--NSKSSCHSYKILRSCCYYVDQNLSLMAA 176
Query: 535 QCEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEIFVR 714
+ EIY+ +DSWR L I++ G+SLKGNTYWV+G E G+F+ FDF+ E+F R
Sbjct: 177 EFEIYDFSTDSWRDLGDITRDMIVYSSGVSLKGNTYWVSGSKEKGFFMRYFDFSKEVFGR 236
Query: 715 LPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICVSNKISEDANK 894
LPL P Q+ LS V +EK++VLQ + S+ MRI V+NKI D K
Sbjct: 237 LPL--PYQSFNANHTAALSAVGNEKIAVLQ------QKILAMSDEMRIWVTNKI--DEAK 286
Query: 895 DLSWRSDLFLEVDFDNYN----TYFRSFLLDEENKVALLCCSIEMVTDDSTTIIYIIGED 1062
DLSW S+ L VD+ +N SFLLDEENKVA+ CS D + IYI+G+D
Sbjct: 287 DLSW-SNFLLTVDYGKFNLPCLVNVTSFLLDEENKVAV--CSDVDTKDGLRSRIYIVGKD 343
Query: 1063 MLKEVYRCTIEESRSNSPLVITYVPSLVHI 1152
KEV++ T S +N PL++ YVPSLV I
Sbjct: 344 FYKEVFKDT-RGSDNNWPLLLCYVPSLVSI 372
>gi|297821759|ref|XP_002878762.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 280 bits (716), Expect = 4e-073
Identities = 166/317 (52%), Positives = 209/317 (65%), Gaps = 20/317 (6%)
Frame = +1
Query: 220 LHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDRLVVWNPCTGQTRNI 399
+HN V+ ++ SGKL+SLK S DL S+IFHC GL+LCS GN LVVW+ TG+TR I
Sbjct: 59 IHNN-VDPSIEFSGKLSSLKDSEDLKISKIFHCEGLILCSTKGNTSLVVWDSSTGETRRI 117
Query: 400 KARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQEEWVPQCEIYELRSDSWRVL 579
+ RT ++ + YALGY +S SSGH +KILR Y NDQ++ V + EIYEL SDSWRVL
Sbjct: 118 RPRTRYRYDDYYALGY--VNSKSSGHSFKILRSCYYENDQKQRVAEFEIYELSSDSWRVL 175
Query: 580 DSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEIFVRLPLPIPIQTERFVSR 759
D F Y +F G SLKGNTYWVAGD E+G F+L FDFTTE F R PL P ++
Sbjct: 176 DYFTRDYGVFCSGRSLKGNTYWVAGDKENGLFMLYFDFTTERFGRFPL--PFESFNPEDT 233
Query: 760 FVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICVSNKISEDANKDLSWRSDLFLEVDFD 939
LSVVR+EKLSVL + +SN M+I ++NKI E +LSW S+ L VD+D
Sbjct: 234 AALSVVREEKLSVLH------QKILDFSNEMKIWLTNKIDETI--ELSW-SNFVLTVDYD 284
Query: 940 NYN----TYFRSFLLDEENKVALLCCSIEMVTDDSTTIIYIIGEDMLKEVYRCTIEESRS 1107
+N SFLLDEENKVA LC I+M D+ T +Y++GED+ K+VY+ T + S
Sbjct: 285 KFNLPSVVNVTSFLLDEENKVA-LCSDIDM-DDEYKTRVYVVGEDIYKQVYKDTTKASYI 342
Query: 1108 NSPLVITYVPSLVHI*K 1158
N PL+I YVPSLVHI K
Sbjct: 343 NWPLLINYVPSLVHIKK 359
Score = 72 bits (175), Expect = 2e-010
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKN 144
M +S+LP DLESEIL RVP KSL++ +TTCKRWYALFRD F+ KN
Sbjct: 1 MKISHLPYDLESEILSRVPTKSLAKFRTTCKRWYALFRDPNFIKKN 46
>gi|297830366|ref|XP_002883065.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 362
Score = 256 bits (653), Expect = 7e-066
Identities = 153/294 (52%), Positives = 194/294 (65%), Gaps = 19/294 (6%)
Frame = +1
Query: 283 SNDLNFSEIFHCNGLMLCSANGNDRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSS 462
S DL ++IFHC+GL+LCS N RLVVWNP TGQTR IK C+++ Y LGY +S
Sbjct: 67 SEDLKITKIFHCDGLILCSTKENTRLVVWNPRTGQTRWIKRSDCYRSEDLYCLGY--VNS 124
Query: 463 SSSGHVYKILRCFDYRNDQEEWVPQCEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTY 642
SS H +KILR Y NDQ V + EIY+ SDSWRVLD ++ +F +G+SLKGNTY
Sbjct: 125 KSSYHSHKILRYCFYYNDQNVCVGEFEIYDFSSDSWRVLDDCTHNWGLFCNGMSLKGNTY 184
Query: 643 WVAGDNESGYFLLKFDFTTEIFVRLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSD 822
+VAG+ E+G+F+L FDF TE F RLPL P Q+ VLSVVR+EKL+VLQ
Sbjct: 185 FVAGEQETGFFMLYFDFKTERFERLPL--PYQSFDSEETAVLSVVREEKLAVLQ------ 236
Query: 823 VMLYGWSNVMRICVSNKISEDANKDLSWRSDLFLEVDFDNYN----TYFRSFLLDEENKV 990
+ SN MRI V+NKI D KDL+W S+ L VD+D ++ SFLLDEENKV
Sbjct: 237 QNIQALSNEMRIWVTNKI--DEAKDLTW-SNFVLTVDYDRFSLPSVNNVSSFLLDEENKV 293
Query: 991 ALLCCSIEMVTDDSTTIIYIIGEDMLKEVYRCTIEESRSNSPLVITYVPSLVHI 1152
A LCC +M D+ T +YI+GE KEVY+ TI+ S N PL+++Y+PSLVHI
Sbjct: 294 A-LCCDRDM-DDEDKTRVYIVGETTYKEVYKETIKGSHFNWPLLLSYLPSLVHI 345
Score = 72 bits (175), Expect = 2e-010
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKN 144
M +S LP++LESEIL RVP KSL++L+TTCKRWYALFRD +FV KN
Sbjct: 1 MMISDLPHELESEILSRVPTKSLAKLQTTCKRWYALFRDPRFVKKN 46
>gi|15229068|ref|NP_188381.1| putative F-box/kelch-repeat protein [Arabidopsis
thaliana]
Length = 396
Score = 246 bits (626), Expect = 1e-062
Identities = 139/269 (51%), Positives = 185/269 (68%), Gaps = 12/269 (4%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQT 186
M +S LP+++ESEIL RVP KSL++L TTCKRWYALFRD +FV KN G++ R +L +
Sbjct: 5 MVISDLPHEIESEILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKN--FGKSERRLMLHS 62
Query: 187 YDGDVYSVAGDLHNTVVNT---PVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDR 357
G VY + DLH ++N+ ++ + KL++LK S DL ++IFHC+GL+LCS N R
Sbjct: 63 NFG-VYKITDDLHG-ILNSGDPSLEFTSKLSNLKISEDLTITKIFHCDGLILCSTKENTR 120
Query: 358 LVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQEEWVPQ 537
LVVWNPCTGQTR IK ++++ +Y LGY +S SS H YKILR Y NDQ+ V +
Sbjct: 121 LVVWNPCTGQTRWIKPSKRYRSDDSYCLGY--VNSKSSYHNYKILRYCFYYNDQDACVSE 178
Query: 538 CEIYELRSDSWRVLDSF-PLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEIFVR 714
EIY+ S+SWRVLD + + +F G+SLKGNTY+VAG+ E+G+F+L FDF TE F R
Sbjct: 179 FEIYDFSSESWRVLDDYCTREWGLFCHGMSLKGNTYFVAGEKETGFFMLYFDFKTERFER 238
Query: 715 LPLPIPIQTERFVSRFVLSVVRDEKLSVL 801
LPL P Q+ VLS+V EKL+VL
Sbjct: 239 LPL--PYQSFDSEDTAVLSIVGGEKLAVL 265
>gi|4337208|gb|AAD18122.1| hypothetical protein [Arabidopsis thaliana]
Length = 281
Score = 210 bits (533), Expect = 6e-052
Identities = 128/259 (49%), Positives = 161/259 (62%), Gaps = 19/259 (7%)
Frame = +1
Query: 346 GNDRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQEE 525
GN RLVVW+ TG+TR IK RT F+ + Y LGY +S SSGH +KILR YRNDQ++
Sbjct: 29 GNTRLVVWDSSTGETRWIKPRTRFRNDDYYGLGY--VNSKSSGHSFKILRSCYYRNDQKQ 86
Query: 526 WVPQCEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEI 705
WV + EIYE SD+WRVLD F Y +F G LK NTYWVAGD E G F+L FDFT E
Sbjct: 87 WVAEFEIYEFGSDTWRVLDYFTHDYGVFSSGGPLKRNTYWVAGDKEMGMFMLYFDFTRER 146
Query: 706 FVRLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICVSNKISED 885
F PLP + LSVVR+EKLSVL + +SN M+I ++NKI E
Sbjct: 147 FGHFPLPFKSFNREDTAS--LSVVREEKLSVLH------QKILEFSNEMKIWLTNKIDET 198
Query: 886 ANKDLSWRSDLFLEVDFDNYN----TYFRSFLLDEENKVALLCCSIEMVTDDSTTIIYII 1053
+LSW S+ L VD+D +N SFLLDEENKVA+ CS V D++ T +Y++
Sbjct: 199 I--ELSW-SNFVLTVDYDKFNLPSVVNVASFLLDEENKVAV--CSDIDVDDENRTRVYVV 253
Query: 1054 GEDMLKEVYRCTIEESRSN 1110
GED+ K+VY+ T + S N
Sbjct: 254 GEDIYKQVYKDTTKASYFN 272
>gi|334184414|ref|NP_180027.2| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 267
Score = 191 bits (483), Expect = 4e-046
Identities = 119/238 (50%), Positives = 146/238 (61%), Gaps = 19/238 (7%)
Frame = +1
Query: 346 GNDRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCFDYRNDQEE 525
GN RLVVW+ TG+TR IK RT F+ + Y LGY +S SSGH +KILR YRNDQ++
Sbjct: 29 GNTRLVVWDSSTGETRWIKPRTRFRNDDYYGLGY--VNSKSSGHSFKILRSCYYRNDQKQ 86
Query: 526 WVPQCEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEI 705
WV + EIYE SD+WRVLD F Y +F G LK NTYWVAGD E G F+L FDFT E
Sbjct: 87 WVAEFEIYEFGSDTWRVLDYFTHDYGVFSSGGPLKRNTYWVAGDKEMGMFMLYFDFTRER 146
Query: 706 FVRLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICVSNKISED 885
F PLP + LSVVR+EKLSVL + +SN M+I ++NKI E
Sbjct: 147 FGHFPLPFKSFNREDTAS--LSVVREEKLSVLH------QKILEFSNEMKIWLTNKIDET 198
Query: 886 ANKDLSWRSDLFLEVDFDNYN----TYFRSFLLDEENKVALLCCSIEMVTDDSTTIIY 1047
+LSW S+ L VD+D +N SFLLDEENKVA+ CS V D++ T +Y
Sbjct: 199 I--ELSW-SNFVLTVDYDKFNLPSVVNVASFLLDEENKVAV--CSDIDVDDENRTRVY 251
>gi|15229053|ref|NP_188376.1| putative F-box protein [Arabidopsis thaliana]
Length = 388
Score = 181 bits (459), Expect = 2e-043
Identities = 119/303 (39%), Positives = 171/303 (56%), Gaps = 27/303 (8%)
Frame = +1
Query: 19 YLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKK------LGRAVRETIL 180
+L DL EIL RVPA SL RL+ TCK+W ALF D +F K++ LG +++ +
Sbjct: 5 HLSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLKDFRI 64
Query: 181 QTYDGDVYSVAGDLHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDRL 360
+ +++ G LHN ++ ++ GKL+SL ND S+I+ C+GL+LCS N RL
Sbjct: 65 YSMSSNLH---GLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGLILCSTKRNTRL 121
Query: 361 VVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILR-CFDYRNDQEEWVPQ 537
VVWNPCTGQTR IK R + T+A GY S SS + YKILR C + Q E+
Sbjct: 122 VVWNPCTGQTRWIKRRNRRMCD-TFAFGYDN-SKSSCLNNYKILRVCEKIKGQQFEY--- 176
Query: 538 CEIYELRSDSWRVLDSFPLHYIMFRDGISLKGNTYWVAGDNESGYFLLKFDFTTEIFVRL 717
EI+E S+SWRVLD P + I+ +S+KGN+YW A ++ YF+ +FDF++E F +L
Sbjct: 177 -EIFEFSSNSWRVLDVNP-NCIIEGRSVSVKGNSYWFATITKTHYFIRRFDFSSETFQKL 234
Query: 718 PLPIPI---QTERFVSRF---VLSVVRD----EKLSVLQIVDNSDVMLYGWSNVMRICVS 867
PLP I R +S F LSV+ EK+ + + + WS + +
Sbjct: 235 PLPFHIFDYNDSRALSAFREEQLSVLHQSFDTEKMDIWVTNKIDETTDWSWSKFFTVRLI 294
Query: 868 NKI 876
N++
Sbjct: 295 NRL 297
>gi|297831308|ref|XP_002883536.1| hypothetical protein ARALYDRAFT_899046
[Arabidopsis lyrata subsp. lyrata]
Length = 368
Score = 164 bits (413), Expect = 5e-038
Identities = 110/273 (40%), Positives = 159/273 (58%), Gaps = 24/273 (8%)
Frame = +1
Query: 13 VSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVK----NKKLGRAVRE-TI 177
+S LP+DL E+L R+P SL ++++TCK+W LF+ F K K+ +E +
Sbjct: 4 MSNLPSDLGEEVLCRIPLTSLRKVRSTCKKWNTLFKGESFAKKYLGDQAKVAATEKEFMM 63
Query: 178 LQTYDGDVYSVAGDLHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGNDR 357
+ D VY + +LHN V + + G+L SL+ +++N S++FHC+GL+LC N R
Sbjct: 64 VMMMDFRVYLMRVNLHND-VKSCIMREGELVSLE--DEVNVSQVFHCDGLLLCIMEDNTR 120
Query: 358 LVVWNPCTGQTRNIKARTCFQT--NLTYALGYSRCSSSSSGHVYKILRCFDYRNDQEEWV 531
+VVWNP GQTR I+ + FQ + YALGY + SS S +YKILR D+ E+
Sbjct: 121 VVVWNPYWGQTRLIEPKHDFQKIYSYMYALGYEK--SSKSCRIYKILRFIDFSPTYVEF- 177
Query: 532 PQCEIYELRSDSWRVLDSFPLHYIMF--RDGISLKGNTYWVAGDNESGYFLLKFDFTTEI 705
+IY++ S+SWR LD + ++ R G+S+KGNTYW A + + LL FDFT E
Sbjct: 178 ---KIYDINSNSWRDLDVITPYCKIYAHRRGVSVKGNTYWFARNRQCN--LLCFDFTRER 232
Query: 706 F-VRLPLPIPIQTERFVSRFVLSVVRDEKLSVL 801
F LPLP VS LS VR+E+L+VL
Sbjct: 233 FGPCLPLPFQFYYSDTVS---LSSVREEQLAVL 262
>gi|42569139|ref|NP_179468.2| F-box protein [Arabidopsis thaliana]
Length = 370
Score = 162 bits (409), Expect = 1e-037
Identities = 128/370 (34%), Positives = 186/370 (50%), Gaps = 42/370 (11%)
Frame = +1
Query: 13 VSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKN-------KKLGRAVRE 171
+S LP D+ E+L + P SL R++ TCK+ L +D F K+ KK +
Sbjct: 9 LSDLPKDVAEEVLSKFPVTSLRRVRFTCKKLNTLSKDMSFTRKHIDKEEAKKKQSKEFHV 68
Query: 172 TILQTYDGDVYSVAGDLHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGN 351
++ + ++S+ N + P++ G+L SL G ++ S IFHC G +LC+
Sbjct: 69 VMMLDFRVSLFSL-----NLLNPNPIERLGQLVSLDGGAQVDISNIFHCEGFLLCTTKDI 123
Query: 352 DRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCF-DYRNDQEEW 528
R+VVWNPC GQT IK R F YALGY + +K+LR D +
Sbjct: 124 SRVVVWNPCVGQTIWIKPRNSFNKWDRYALGYDVMKN------HKVLRFVDDGEYGRRHL 177
Query: 529 VPQCEIYELRSDSWRVLDSFPLHYIMF-RDGISLKGNTYWVA-------GDNESGYFLLK 684
+ + EIY SDSW VLD P I F G+S+ GN+YW A G + YFLL
Sbjct: 178 LCEFEIYSFESDSWEVLDVNPDWEIDFVHRGLSIDGNSYWFARDKVVPYGGQDPSYFLLC 237
Query: 685 FDFTTEIFVRLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICV 864
FDFTTE F R PLP+P Q F LS V D +++VL +S L W +
Sbjct: 238 FDFTTERF-RPPLPLPFQ-PYFGDTVALSSVGDNQIAVLCQRSSSPYTLKIW-------I 288
Query: 865 SNKISEDA---NKDLSWRSDLFLEVDFDNYNTYFRSFLLDEENKVA-LLCCSIEMVTDDS 1032
S+K+ +A NK L + D+ + ++++ SF +DEE K+A +L +I D +
Sbjct: 289 SSKVEPNAVSWNK-LFLKVDM-KPLTGNSFSYSGGSFFVDEEKKMAVVLDKNIGGGFDPT 346
Query: 1033 TTIIYIIGED 1062
I YIIG++
Sbjct: 347 RNIAYIIGKE 356
>gi|4185144|gb|AAD08947.1| expressed protein [Arabidopsis thaliana]
Length = 363
Score = 162 bits (409), Expect = 1e-037
Identities = 128/370 (34%), Positives = 186/370 (50%), Gaps = 42/370 (11%)
Frame = +1
Query: 13 VSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKN-------KKLGRAVRE 171
+S LP D+ E+L + P SL R++ TCK+ L +D F K+ KK +
Sbjct: 2 LSDLPKDVAEEVLSKFPVTSLRRVRFTCKKLNTLSKDMSFTRKHIDKEEAKKKQSKEFHV 61
Query: 172 TILQTYDGDVYSVAGDLHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGN 351
++ + ++S+ N + P++ G+L SL G ++ S IFHC G +LC+
Sbjct: 62 VMMLDFRVSLFSL-----NLLNPNPIERLGQLVSLDGGAQVDISNIFHCEGFLLCTTKDI 116
Query: 352 DRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCF-DYRNDQEEW 528
R+VVWNPC GQT IK R F YALGY + +K+LR D +
Sbjct: 117 SRVVVWNPCVGQTIWIKPRNSFNKWDRYALGYDVMKN------HKVLRFVDDGEYGRRHL 170
Query: 529 VPQCEIYELRSDSWRVLDSFPLHYIMF-RDGISLKGNTYWVA-------GDNESGYFLLK 684
+ + EIY SDSW VLD P I F G+S+ GN+YW A G + YFLL
Sbjct: 171 LCEFEIYSFESDSWEVLDVNPDWEIDFVHRGLSIDGNSYWFARDKVVPYGGQDPSYFLLC 230
Query: 685 FDFTTEIFVRLPLPIPIQTERFVSRFVLSVVRDEKLSVLQIVDNSDVMLYGWSNVMRICV 864
FDFTTE F R PLP+P Q F LS V D +++VL +S L W +
Sbjct: 231 FDFTTERF-RPPLPLPFQ-PYFGDTVALSSVGDNQIAVLCQRSSSPYTLKIW-------I 281
Query: 865 SNKISEDA---NKDLSWRSDLFLEVDFDNYNTYFRSFLLDEENKVA-LLCCSIEMVTDDS 1032
S+K+ +A NK L + D+ + ++++ SF +DEE K+A +L +I D +
Sbjct: 282 SSKVEPNAVSWNK-LFLKVDM-KPLTGNSFSYSGGSFFVDEEKKMAVVLDKNIGGGFDPT 339
Query: 1033 TTIIYIIGED 1062
I YIIG++
Sbjct: 340 RNIAYIIGKE 349
>gi|18401231|ref|NP_566558.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
Length = 391
Score = 142 bits (356), Expect = 2e-031
Identities = 87/223 (39%), Positives = 123/223 (55%), Gaps = 16/223 (7%)
Frame = +1
Query: 13 VSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRE------- 171
+S LP DL E+L R+P S+ ++ TCK+W L +D F K+ + RA +
Sbjct: 4 ISDLPRDLTEEVLSRIPVTSMRAVRFTCKKWNTLSKDRSFTKKHLRGARAAAKKKQTKEF 63
Query: 172 TILQTYDGDVYSVAGDLHNTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGLMLCSANGN 351
++ VY + +L +N ++ GKL SL + ++ S+IFHC GL+LC
Sbjct: 64 QVIMMIQFRVYLYSVNL----LNPSIERIGKLISLDVEDHVDISKIFHCGGLLLCITKDI 119
Query: 352 DRLVVWNPCTGQTRNIKARTCFQTNLTYALGYSRCSSSSSGHVYKILRCF-DYRNDQE-E 525
RLVVWNP +GQTR IK R + YALGY + S YKILR DY +D+
Sbjct: 120 SRLVVWNPYSGQTRWIKPRNSYHRLDRYALGYE--EKNKSCRCYKILRFMDDYEDDRALR 177
Query: 526 WVPQCEIYELRSDSWRVLDSFPLHYIMF-RDGISLKGNTYWVA 651
+ + EIY+L SDSW+V++ P + F G+SLKGNTYW A
Sbjct: 178 LIREFEIYDLNSDSWKVVNVTPDWDVEFYHRGLSLKGNTYWFA 220
>gi|297830364|ref|XP_002883064.1| hypothetical protein ARALYDRAFT_479229
[Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 96 bits (238), Expect = 1e-017
Identities = 53/109 (48%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQT 186
M +S LP+DLESEIL+RVPAKSL++ KTTCKRWYALFRD +FV KN G+A ++
Sbjct: 1 MMISDLPHDLESEILYRVPAKSLAKWKTTCKRWYALFRDPRFVKKN--FGKAATREMIVL 58
Query: 187 YDGDVYSVAGDLH--NTVVNTPVQVSGKLTSLKGSNDLNFSEIFHCNGL 327
+ +YS + +L N V+ ++V+GKL L S ++ S IF+C+ L
Sbjct: 59 MNLRLYSNSVNLQGINHRVDPAMEVTGKLIKLNDSEAVDISNIFYCDDL 107
>gi|297834632|ref|XP_002885198.1| hypothetical protein ARALYDRAFT_479202
[Arabidopsis lyrata subsp. lyrata]
Length = 349
Score = 86 bits (211), Expect = 1e-014
Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Frame = +1
Query: 7 MTVSYLPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQT 186
M + LP+DLESEIL RVPAKSL++LKTTCKRW+ALFRD +FV +N LG++ RE +L
Sbjct: 2 MKIPNLPDDLESEILCRVPAKSLTKLKTTCKRWHALFRDPRFVKQN--LGKSAREVML-L 58
Query: 187 YDGDVYSVAGDLH--NTVVNTPVQVSGKLTSLKGSNDL 294
+ V+S++ + H + V+ ++ SGKL L S D+
Sbjct: 59 MNHRVHSISVNRHGIHDGVDASMEFSGKLIRLSDSKDV 96
>gi|4586069|gb|AAD25686.1| hypothetical protein [Arabidopsis thaliana]
Length = 324
Score = 77 bits (188), Expect = 6e-012
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 LPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETIL 180
LP+DLESEIL R+PAKSL++LKTTCKRWY LFRD KF KN LG++ RE +L
Sbjct: 12 LPDDLESEILSRIPAKSLTKLKTTCKRWYVLFRDPKFAKKN--LGKSAREVML 62
>gi|75273458|sp|Q9LJ39.1|FB185_ARATH RecName: Full=Putative F-box protein
At3g24700
Length = 270
Score = 74 bits (181), Expect = 4e-011
Identities = 39/58 (67%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 LPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQTYDG 195
LP DLESEIL RVPA SL RLKTTCKRWYALFRD +FV KN LG+A I G
Sbjct: 5 LPLDLESEILSRVPATSLQRLKTTCKRWYALFRDPRFVKKN--LGKAATHVIFDNRSG 60
>gi|15230161|ref|NP_189113.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 249
Score = 74 bits (181), Expect = 4e-011
Identities = 39/58 (67%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 LPNDLESEILFRVPAKSLSRLKTTCKRWYALFRDSKFVVKNKKLGRAVRETILQTYDG 195
LP DLESEIL RVPA SL RLKTTCKRWYALFRD +FV KN LG+A I G
Sbjct: 5 LPLDLESEILSRVPATSLQRLKTTCKRWYALFRDPRFVKKN--LGKAATHVIFDNRSG 60
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,810,539,025,462
Number of Sequences: 15229318
Number of Extensions: 3810539025462
Number of Successful Extensions: 885398663
Number of sequences better than 0.0: 0
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