BLASTX 7.6.2
Query= UN33462 /QuerySize=1235
(1234 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 408 5e-114
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 401 5e-112
TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein | ... 66 5e-011
TAIR9_protein||AT5G46730.2 | Symbols: | glycine-rich protein | ... 64 1e-010
TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family p... 55 6e-008
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 408 bits (1047), Expect = 5e-114
Identities = 223/289 (77%), Positives = 234/289 (80%), Gaps = 36/289 (12%)
Frame = +2
Query: 2 AVGGFGLRMMDGRFSSSPIGAGRSGFASYNGGSGYGMNVNFEQGLPTGFTG-----GNVD 166
AVGG+GLR MDGRF SP+GAGRSGFA+Y+ SGYGMNVNF+QGLPTGFTG GNVD
Sbjct: 223 AVGGYGLR-MDGRF--SPVGAGRSGFANYS--SGYGMNVNFDQGLPTGFTGGTNYNGNVD 277
Query: 167 YGRGMSPYYIGNTNRFGPVVGYEGGNGGGGNSSFFSS---NLWGNNGGRNYNNNNNNNMG 337
YGRGMSPYYIGNTNRFGP VGYEGGN GGGNSSFFSS NLWGNNGG NYNNNN N+
Sbjct: 278 YGRGMSPYYIGNTNRFGPAVGYEGGN-GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS 336
Query: 338 ----GGSTSGNNTLNGPFGSSGDVNWGAP-GGNNGVSNENVKFGYGGNGESGFGLG---- 490
GGS+SGNNTL+GPFG+SG VNWGAP GGNN VSNENVKFGYGGNGESGFGLG
Sbjct: 337 NTYMGGSSSGNNTLSGPFGNSG-VNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGY 395
Query: 491 GARNIGPPSKAAAAPSSSFSS----NNAGYEAGGLAEFYGNGAVYSDPTWRSSSPPETEG 658
ARN P AAPSSSFSS NN GY+ GLAEFYGNGAVYSDPTWRS + PETEG
Sbjct: 396 AARN---PGANKAAPSSSFSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPT-PETEG 451
Query: 659 PASFSYGIVGGVGGGGPSSDVSARSSSPGYVGSYSVNKRQPNRGEPSE* 805
PA FSYGI GGG PSSDVSARSSSPGYVGSYSVNKRQPNRGEPS *
Sbjct: 452 PAPFSYGI----GGGVPSSDVSARSSSPGYVGSYSVNKRQPNRGEPSR* 496
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 401 bits (1030), Expect = 5e-112
Identities = 220/284 (77%), Positives = 231/284 (81%), Gaps = 36/284 (12%)
Frame = +2
Query: 2 AVGGFGLRMMDGRFSSSPIGAGRSGFASYNGGSGYGMNVNFEQGLPTGFTG-----GNVD 166
AVGG+GLR MDGRF SP+GAGRSGFA+Y+ SGYGMNVNF+QGLPTGFTG GNVD
Sbjct: 223 AVGGYGLR-MDGRF--SPVGAGRSGFANYS--SGYGMNVNFDQGLPTGFTGGTNYNGNVD 277
Query: 167 YGRGMSPYYIGNTNRFGPVVGYEGGNGGGGNSSFFSS---NLWGNNGGRNYNNNNNNNMG 337
YGRGMSPYYIGNTNRFGP VGYEGGN GGGNSSFFSS NLWGNNGG NYNNNN N+
Sbjct: 278 YGRGMSPYYIGNTNRFGPAVGYEGGN-GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS 336
Query: 338 ----GGSTSGNNTLNGPFGSSGDVNWGAP-GGNNGVSNENVKFGYGGNGESGFGLG---- 490
GGS+SGNNTL+GPFG+SG VNWGAP GGNN VSNENVKFGYGGNGESGFGLG
Sbjct: 337 NTYMGGSSSGNNTLSGPFGNSG-VNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGY 395
Query: 491 GARNIGPPSKAAAAPSSSFSS----NNAGYEAGGLAEFYGNGAVYSDPTWRSSSPPETEG 658
ARN P AAPSSSFSS NN GY+ GLAEFYGNGAVYSDPTWRS + PETEG
Sbjct: 396 AARN---PGANKAAPSSSFSSASATNNTGYDTAGLAEFYGNGAVYSDPTWRSPT-PETEG 451
Query: 659 PASFSYGIVGGVGGGGPSSDVSARSSSPGYVGSYSVNKRQPNRG 790
PA FSYGI GGG PSSDVSARSSSPGYVGSYSVNKRQPNRG
Sbjct: 452 PAPFSYGI----GGGVPSSDVSARSSSPGYVGSYSVNKRQPNRG 491
>TAIR9_protein||AT5G46730.1 | Symbols: | glycine-rich protein |
chr5:18964030-18964902 FORWARD
Length = 291
Score = 66 bits (159), Expect = 5e-011
Identities = 60/199 (30%), Positives = 75/199 (37%), Gaps = 9/199 (4%)
Frame = +2
Query: 176 GMSPYYIGNTN--RFGPVVGYEGGNGGGGNSSFFSSNLWGNNGGRNYNNNNNNNMGGGST 349
G+S Y + N +G G GG+GGGG S SS +G G Y + GGG
Sbjct: 16 GVSICYATSRNLLNYGQASG-GGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYG 74
Query: 350 SGNNTLNGPFGSSGDVNWGA--PGGNNGVSNENVKFGYGG--NGESGFGLGGARNIGPPS 517
+G G GA GG + E GYGG G +G G GG+ G +
Sbjct: 75 GAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGGSA 134
Query: 518 KAAAAPSSSFSSNNAGYEAGGLAEFYGNGAVYSDPTWRSSSPPETEGPASFSYGIVGGVG 697
A +S N AG G A YG GA + G A G GG G
Sbjct: 135 YGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEG 194
Query: 698 GGGPSSDVSARSSSPGYVG 754
GG + + GY G
Sbjct: 195 GGAGGG--GSHGGAGGYGG 211
>TAIR9_protein||AT5G46730.2 | Symbols: | glycine-rich protein |
chr5:18964030-18964902 FORWARD
Length = 247
Score = 64 bits (155), Expect = 1e-010
Identities = 58/184 (31%), Positives = 71/184 (38%), Gaps = 9/184 (4%)
Frame = +2
Query: 176 GMSPYYIGNTN--RFGPVVGYEGGNGGGGNSSFFSSNLWGNNGGRNYNNNNNNNMGGGST 349
G+S Y + N +G G GG+GGGG S SS +G G Y + GGG
Sbjct: 16 GVSICYATSRNLLNYGQASG-GGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYG 74
Query: 350 SGNNTLNGPFGSSGDVNWGA--PGGNNGVSNENVKFGYGG--NGESGFGLGGARNIGPPS 517
+G G GA GG + E GYGG G +G G GG+ G +
Sbjct: 75 GAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGGSA 134
Query: 518 KAAAAPSSSFSSNNAGYEAGGLAEFYGNGAVYSDPTWRSSSPPETEGPA--SFSYGIVGG 691
A +S N AG G A YG GA + G A YG GG
Sbjct: 135 YGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGSGGG 194
Query: 692 VGGG 703
GGG
Sbjct: 195 EGGG 198
>TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family protein |
chr3:6480701-6483593 REVERSE
Length = 701
Score = 55 bits (132), Expect = 6e-008
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = +2
Query: 233 EGGNGGGGNSSFFSSNLWGNNGGRNYNNNNNNNMGGGSTSGNNTLNGPFGSSGDVNWGAP 412
+G N GN+ +++ NN G N N+NNN N + +GNN NG + D N
Sbjct: 68 QGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNN-NGNNNNGNDNNGNNN 126
Query: 413 GGNNGVSNENVKFGYGGNGES--GFGLGGARNIGPPSKAAAAP-SSSFSSNNAGYEAGGL 583
GNN N N G G N S RN P +A A P SS SN++G
Sbjct: 127 NGNNN-DNNNQNNGGGSNNRSPPPPSRNSDRNSPSPPRALAPPRSSGGGSNSSGNNEPNT 185
Query: 584 AEFYG 598
A G
Sbjct: 186 AAIVG 190
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,573,006,241
Number of Sequences: 33410
Number of Extensions: 17573006241
Number of Successful Extensions: 567479730
Number of sequences better than 0.0: 0
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